Atr-MIR156l

Basic info.

• miRNA locus ID
• Atr-MIR156l

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00188  440124  440247  -

• Comments
• A member of MIR156

• Confidence level
• 

Secondary structure and sequence

  TT      TTGAAAAAA       -      G  GA     -AAA  -A      AT   CTT
    GGAAAA         TGGGGGC CCTTTT AG  CAAAG    GC  TTTCGA  CGT   
    ||||||         ||||||| |||||| ||  |||||    ||  ||||||  |||    
    TCTTTT         ACCCTCG GGGAAG TC  GTTTC    CG  GAAGTT  GCG   
CCCT      CTATTCTTA       A      -  AG     CTAC  AC      AC   TTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]