Atr-MIR156n

Basic info.

• miRNA locus ID
• Atr-MIR156n

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00052  3292169  3292292  -

• Comments
• A member of MIR156

• Confidence level
• 

Secondary structure and sequence

  GTATGATAGAGAA AG           -             A      CT   TT   C  A
               G  GAGGTGACAGA AGAGAGTGAGCAC TATGGC  TTC  GCA CG 
               |  ||||||||||| ||||||||||||| ||||||  |||  ||| || G
               C  CTTCACTGTCT TCTTTCATTCGTG GTATTG  AAG  CGT GC 
TACACACCACAACCA CG           A             C      --   TT   A  T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]