Atr-MIR160a

Basic info.

• miRNA locus ID
• Atr-MIR160a

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00092  1776639  1776763  -

• Comments
• A member of MIR160

• Confidence level
• 

Secondary structure and sequence

  GGAAAAGGTAAATGGGGT     C       C              TA   T  A   TGAG
                    TATGC TGGCTCC TGTATGCCACTCTT  GAG CC ATC    
                    ||||| ||||||| ||||||||||||||  ||| || |||     
                    ATACG ACCGAGG GCGTGCGGTGGGAG  CTC GG TAG    
GCTAACGATCTCTCTCTTTC     A       A              TA   -  C   TCGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]