Atr-MIR160b

Basic info.

• miRNA locus ID
• Atr-MIR160b

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00175  387321  387441  +

• Comments
• A member of MIR160

• Confidence level
• 

Secondary structure and sequence

   TGAATGGTGCAA   T C     C       C         CC    CC   C   ATC
               GTA G TATGC TGGCTCC TGTATGCCA  TGCA  GTC ATG   
               ||| | ||||| ||||||| |||||||||  ||||  ||| |||   C
               CAT C ATACG ACCGAGG GCGTGCGGT  ACGT  CAG TAC   
TCTCTCTTCTCTCTC   T -     T       A         CC    AC   T   CTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]