Atr-MIR170b

Basic info.

• miRNA locus ID
• Atr-MIR170b

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00003  7402112  7402221  +

• Comments
• A member of MIR170

• Confidence level
• 

Secondary structure and sequence

G G       --   G   C                   T  AC     -  C    A
 C CATGATT  TTG GTA GGTGTTGGCACGGTTCAAT CA  CACTG CA TGCT 
 | |||||||  ||| ||| ||||||||||||||||||| ||  ||||| || |||| C
 G GTACTGA  AAC CGT CTATAACCGTGCCGAGTTA GT  GTGAT GT ACGA 
G G       TC   G   A                   -  --     A  -    A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]