Atr-MIR479a

Basic info.

• miRNA locus ID
• Atr-MIR479a

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00041  1932066  1932189  -

• Comments
• A member of MIR479

• Confidence level
• 

Secondary structure and sequence

  T T    - T    G     AC           C       GTAAGCT       ---    A
   C TGAA G GGGG ACAAG  GTGATGTTGGT CGGTTCA       TCTCTCA   TTCA 
   | |||| | |||| |||||  ||||||||||| |||||||       |||||||   |||| C
   G ACTT C TCCC TGTTT  CACTATAACTA GCCGAGT       AGAGAGT   AAGT 
TCG T    A T    G     -C           A       AGATTTT       TCG    A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]