Atr-MIR8568a

Basic info.

• miRNA locus ID
• Atr-MIR8568a

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00024  4164833  4164954  -

• Comments
• A member of MIR8568

• Confidence level
• 

Secondary structure and sequence

    AGAAAGA   AT   ATA      G      -           C   -     AATTTTAT
           GGA  TCA   GGACAA GATCGC GTAAGCCAAGA GGA CAGCA        
           |||  |||   |||||| |||||| ||||||||||| ||| |||||         
           CCT  GGT   CCTGTT CTAGTG CATTCGGTTCT CCT GTCGT        
TTGGTAAACAA   AC   --A      G      T           A   T     ACCACTAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]