Atr-MIR8572a

Basic info.

• miRNA locus ID
• Atr-MIR8572a

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00028  4881440  4881571  +

• Comments
• A member of MIR8572

• Confidence level
• 

Secondary structure and sequence

  -A   G C   AA    G     C       TT                         A  ACAC
 C  GGT G CCC  ATAT GGTGA CCGGTCG  GGAATCCTCTCTCAAACAATCGCGA GC    
 |  ||| | |||  |||| ||||| |||||||  ||||||||||||||||||||||||| ||     
 G  CCA C GGG  TATA CCACT GGCCAGC  CCTTAGGAGAGAGTTTGTTGGCGTT CG    
G AC   G A   CC    G     T       CC                         C  GGTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]