Atr-MIRN25b

Basic info.

• miRNA locus ID
• Atr-MIRN25b

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00029  3037924  3038069  -

• Comments
• A member of MIRN25

• Confidence level
• 

Secondary structure and sequence

  T         T     A  ATA                  A      A         TGGAG       GTGAC
   TTTTTATTA TAGGA GG   TGATGTCATCTATATGGG TGTAAT TCACCCACA     TACACTA     
   ||||||||| ||||| ||   |||||||||||||||||| |||||| |||||||||     |||||||     A
   AAAAATGGT ATCCT CC   ACTGCAGTAGATGTACTT ATATTG AGTGGGTGT     ATGTGGT     
TAA         T     C  CAC                  C      A         -----       AATTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]