Atr-MIRN37a

Basic info.

• miRNA locus ID
• Atr-MIRN37a

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00067  1253913  1254081  +

• Comments
• A member of MIRN37

• Confidence level
• 

Secondary structure and sequence

 GAGAATAT         -  A      G   --              --  GT     G  --GA  GG     T    G A     A
         ATGGGTTTT GA GCAGTT CTT  CGGGATAGGTGATT  TG  GGATA GA    AT  GAAGG GAAC T TTGCC 
         ||||||||| || |||||| |||  ||||||||||||||  ||  ||||| ||    ||  ||||| |||| | ||||| A
         TACCCAAGA CT CGTTAA GAG  GCTCTGTTTGTTGG  AC  TTTAT TT    TA  CTTCC CTTG A AGTGG 
GGATCAGAT         G  C      -   CG              GT  AG     A  ATGG  AA     C    G -     A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]