Atr-MIRN37d

Basic info.

• miRNA locus ID
• Atr-MIRN37d

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold03173  10  269  -

• Comments
• A member of MIRN37

• Confidence level
• 

Secondary structure and sequence

TTAT    -   -   ---      -     T    -GA  -   G  TCG     -  ATTATA  T         ---  -  GTATATTGATATTTTTATTTTCCTCGAACAATTATAATGCAAGGGATAAAGGTGTTTC
    ATTT CTC ATG   GGCTGT TTGTC CGGC   GA ATT CC   AGAAC CC      GG GAAAGTGAA   AG TG                                                          
    |||| ||| |||   |||||| ||||| ||||   || ||| ||   ||||| ||      || |||||||||   || ||                                                           
    TAAA GAG TAC   CCGATA AACAG GCTG   CT TAA GG   TCTTG GG      AA GGGCTCAGT   TT AG                                                          
        C   C   AGT      T     -    AAA  A   A  -TA     T  ------  -         AGG  G  AGATGGACTGAAAAATTGGGCACTTTAAAACGTTCCCCCGTTGTGACTGAGGTTGTTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]