Atr-MIRN70a

Basic info.

• miRNA locus ID
• Atr-MIRN70a

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00013  6986813  6986982  +

• Comments
• A member of MIRN70

• Confidence level
• 

Secondary structure and sequence

   G       -    A  C        C      C          AA  G            ---AAAA    C TTTGAGGCATTAG
  C ACCGATT CCAG TC GGATTGGG GGTTCC ATCCAGATCG  AT TTTTCAAACCCT       CACA A             
  | ||||||| |||| || |||||||| |||||| ||||||||||  || ||||||||||||       |||| |             G
  G TGGTTAA GGTT AG CCTAGTCC CTAAGG TAGGTCTAGC  TA AAAAGTTTGGGA       TGTT A             
AG G       A    A  -        A      T          CG  -            CTACATA    - CGCTAACAGTGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop sequence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

No miRNA locus in ± 10k bp interval.

Target gene info.[+]