Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA341533 Atalantia buxifolia Transcriptome or Gene expression Wang et al., 2017
2
Library Title Platform Total Base VCF File
SRR5865828 RNA-Seq of Atalantia buxifolia:mature fruit from China, HKC_SM ILLUMINA 15240382750 bp
SRR4116695 RNA-Seq of Atalantia buxifolia:Mature whole plant from China, Sbu ILLUMINA 5334798250 bp
PRJNA421068 Transcriptome data of Atlantia buxifolia -
18
Library Title Platform Total Base VCF File
SRR6347345 RNA-Seq of Atalantia buxifolia:ovule before flowering from China, Atlantia buxifolia, HKC_BF1 ILLUMINA 7362257750 bp
SRR7647820 RNA-Seq of Atalantia buxifolia:late stage ovules from China, HKC_NF, HKC_NF3 ILLUMINA 10541011200 bp
SRR7647823 RNA-Seq of Atalantia buxifolia:mature leaf from China, HKC_SL, SL3 ILLUMINA 10813600500 bp
SRR7637790 RNA-Seq of Atalantia buxifolia:ovule before flowering from China, Atlantia buxifolia, HKC_BF3 ILLUMINA 10464790800 bp
SRR7691640 RNA-Seq of Atalantia buxifolia:young fruits from China, SY, SY3 ILLUMINA 10697623500 bp
SRR7691683 RNA-Seq of Atalantia buxifolia:mature fruits from China, HKC_SM, SM3 ILLUMINA 10434872400 bp
SRR7691717 RNA-Seq of Atalantia buxifolia:mature seed from China, SZ, SZ3 ILLUMINA 9850631700 bp
SRR6349558 RNA-Seq of Atalantia buxifolia:young fruits from China, SY, SY1 ILLUMINA 7369720500 bp
SRR6349602 RNA-Seq of Atalantia buxifolia:young fruits from China, SY, SY2 ILLUMINA 6705139250 bp
SRR6349678 RNA-Seq of Atalantia buxifolia:mature fruits from China, HKC_SM, SM1 ILLUMINA 7371867250 bp
SRR6349696 RNA-Seq of Atalantia buxifolia:mature fruits from China, HKC_SM, SM2 ILLUMINA 8576594500 bp
SRR6349932 RNA-Seq of Atalantia buxifolia:mature seed from China, SZ, SZ1 ILLUMINA 6728376750 bp
SRR6349993 RNA-Seq of Atalantia buxifolia:mature seed from China, SZ, SZ2 ILLUMINA 8088304500 bp
SRR6347548 RNA-Seq of Atalantia buxifolia:late stage ovules from China, HKC_NF, HKC_NF1 ILLUMINA 7241901500 bp
SRR6347570 RNA-Seq of Atalantia buxifolia:late stage ovules from China, HKC_NF, HKC_NF2 ILLUMINA 6690164750 bp
SRR6347346 RNA-Seq of Atalantia buxifolia:ovule before flowering from China, Atlantia buxifolia, HKC_BF2 ILLUMINA 6831106000 bp
SRR6347626 RNA-Seq of Atalantia buxifolia:mature leaf from China, HKC_SL, SL1 ILLUMINA 7158042000 bp
SRR6347631 RNA-Seq of Atalantia buxifolia:mature leaf from China, HKC_SL, SL2 ILLUMINA 8115393250 bp
PRJNA612769 Transcriptome data of Atalantia buxifolia with citrus canker Genet et al., 2021
12
Library Title Platform Total Base VCF File
SRR13480462 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-control6, HKC-D6-2 ILLUMINA 10173976800 bp
SRR13480463 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-control6, HKC-D6-1 ILLUMINA 8405795400 bp
SRR13480491 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-treatment6, HKC-T6-2 ILLUMINA 10836728100 bp
SRR13480492 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-treatment6, HKC-T6-1 ILLUMINA 9296474700 bp
SRR13480494 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-control24, HKC-D24-2 ILLUMINA 9620455500 bp
SRR13480495 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-control24, HKC-D24-1 ILLUMINA 8321401800 bp
SRR13480640 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-treatment48, HKC-T48-1 ILLUMINA 8510325300 bp
SRR13480641 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-treatment24, HKC-T24-2 ILLUMINA 12238209900 bp
SRR13480642 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-treatment24, HKC-T24-1 ILLUMINA 7790071200 bp
SRR13481024 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-control48, HKC-D48-1 ILLUMINA 9483288000 bp
SRR13480639 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-treatment48, HKC-T48-2 ILLUMINA 10513599900 bp
SRR13481023 RNA-Seq of Atalantia buxifolia:mature plant with leaf from China, ATL, HKC-canker-control48, HKC-D48-2 ILLUMINA 9197338800 bp
PRJNA894942 Evolutionary dynamics of alternative splicing in citrus revealed by Nanopore RNAseq Hu et al., 2022
2
Library Title Platform Total Base VCF File
SRR22063087 RNA-Seq of Atalantia buxifolia:leaf from China, SRX18043796, 10 ILLUMINA 6607904100 bp
SRR22063104 RNA-Seq of Atalantia buxifolia:leaf from China, SRX18043779, 1 OXFORD_NANOPORE 5942276796 bp

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