Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA734968 Induced defense response in citrus leaves against Diaporthe citri Li et al., 2023
20
Library Title Platform Total Base VCF File
SRR14728278 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D3_5 ILLUMINA 7123291800 bp
SRR14728279 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D3_4 ILLUMINA 7194506700 bp
SRR14728280 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D3_3 ILLUMINA 14095869000 bp
SRR14728281 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D3_2 ILLUMINA 7192839300 bp
SRR14728282 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D3_1 ILLUMINA 7268978400 bp
SRR14728283 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D14_5 ILLUMINA 6739572300 bp
SRR14728284 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D14_4 ILLUMINA 7827900900 bp
SRR14728285 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D14_3 ILLUMINA 7139195100 bp
SRR14728286 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H3_5 ILLUMINA 6776022000 bp
SRR14728287 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H3_4 ILLUMINA 6334230300 bp
SRR14728288 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H3_3 ILLUMINA 6868146900 bp
SRR14728289 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H3_2 ILLUMINA 10549734600 bp
SRR14728290 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H3_1 ILLUMINA 8087166300 bp
SRR14728291 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H14_5 ILLUMINA 6946902300 bp
SRR14728292 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H14_4 ILLUMINA 6740228400 bp
SRR14728293 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H14_3 ILLUMINA 7073857800 bp
SRR14728294 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H14_2 ILLUMINA 6724497000 bp
SRR14728295 RNA-Seq of Citrus reticulata:Mock-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, H14_1 ILLUMINA 6748651200 bp
SRR14728296 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D14_2 ILLUMINA 6884520600 bp
SRR14728297 RNA-Seq of Citrus reticulata:Dc-inoculation treatment plant with leaf from China: Hangzhou, Hongjv, D14_1 ILLUMINA 6761811000 bp
PRJNA776912 Transcriptome sequencing of flavedo tissues at different stages of fruit development was performed to perform co-expression analysis. -
15
Library Title Platform Total Base VCF File
SRR16685329 RNA-Seq of Citrus reticulata:180 days after flowering plant with flavedo biological replicate 1 from China:Wuhan, HJ, HJ-180-1 ILLUMINA 6858732600 bp
SRR16685330 RNA-Seq of Citrus reticulata:150 days after flowering plant with flavedo biological replicate 3 from China:Wuhan, HJ, HJ-150-3 ILLUMINA 7352089800 bp
SRR16685331 RNA-Seq of Citrus reticulata:150 days after flowering plant with flavedo biological replicate 2 from China:Wuhan, HJ, HJ-150-2 ILLUMINA 6795530400 bp
SRR16685332 RNA-Seq of Citrus reticulata:150 days after flowering plant with flavedo biological replicate 1 from China:Wuhan, HJ, HJ-150-1 ILLUMINA 7462545600 bp
SRR16685333 RNA-Seq of Citrus reticulata:120 days after flowering plant with flavedo biological replicate 3 from China:Wuhan, HJ, HJ-120-3 ILLUMINA 7926409800 bp
SRR16685334 RNA-Seq of Citrus reticulata:120 days after flowering plant with flavedo biological replicate 2 from China:Wuhan, HJ, HJ-120-2 ILLUMINA 6515765700 bp
SRR16685335 RNA-Seq of Citrus reticulata:120 days after flowering plant with flavedo biological replicate 1 from China:Wuhan, HJ, HJ-120-1 ILLUMINA 6863961600 bp
SRR16685343 RNA-Seq of Citrus reticulata:90 days after flowering plant with flavedo biological replicate 3 from China:Wuhan, HJ, HJ-90-3 ILLUMINA 6653983800 bp
SRR16685349 RNA-Seq of Citrus reticulata:210 days after flowering plant with flavedo biological replicate 3 from China:Wuhan, HJ, HJ-210-3 ILLUMINA 7035090600 bp
SRR16685350 RNA-Seq of Citrus reticulata:210 days after flowering plant with flavedo biological replicate 2 from China:Wuhan, HJ, HJ-210-2 ILLUMINA 7567086300 bp
SRR16685351 RNA-Seq of Citrus reticulata:210 days after flowering plant with flavedo biological replicate 1 from China:Wuhan, HJ, HJ-210-1 ILLUMINA 7059291900 bp
SRR16685352 RNA-Seq of Citrus reticulata:180 days after flowering plant with flavedo biological replicate 3 from China:Wuhan, HJ, HJ-180-3 ILLUMINA 7128072600 bp
SRR16685353 RNA-Seq of Citrus reticulata:180 days after flowering plant with flavedo biological replicate 2 from China:Wuhan, HJ, HJ-180-2 ILLUMINA 6529185000 bp
SRR16685354 RNA-Seq of Citrus reticulata:90 days after flowering plant with flavedo biological replicate 2 from China:Wuhan, HJ, HJ-90-2 ILLUMINA 7026186000 bp
SRR16685355 RNA-Seq of Citrus reticulata:90 days after flowering plant with flavedo biological replicate 1 from China:Wuhan, HJ, HJ-90-1 ILLUMINA 7675945800 bp
PRJNA811620 Transcriptome profiling for seed abortion in Ponkan (Citrus reticulata) -
36
Library Title Platform Total Base VCF File
SRR18186460 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928673 ILLUMINA 11345511840 bp
SRR18186461 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928672 ILLUMINA 11263857382 bp
SRR18186462 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928671 ILLUMINA 11806365350 bp
SRR18186463 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928670 ILLUMINA 10455691792 bp
SRR18186464 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928669 ILLUMINA 10471455588 bp
SRR18186465 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928668 ILLUMINA 12177812968 bp
SRR18186466 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928667 ILLUMINA 10924150870 bp
SRR18186467 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928666 ILLUMINA 11783618106 bp
SRR18186468 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Integument, "Egan No.1" ponkan, GSM5928665 ILLUMINA 9372413564 bp
SRR18186469 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928664 ILLUMINA 10548031916 bp
SRR18186470 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928663 ILLUMINA 9997917474 bp
SRR18186471 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928662 ILLUMINA 11023383842 bp
SRR18186472 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928661 ILLUMINA 11022036922 bp
SRR18186473 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928660 ILLUMINA 10947734050 bp
SRR18186474 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928659 ILLUMINA 11029444076 bp
SRR18186475 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928658 ILLUMINA 10000904254 bp
SRR18186476 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928657 ILLUMINA 10685079818 bp
SRR18186477 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Integument, "Huagan No.4" ponkan, GSM5928656 ILLUMINA 10765653418 bp
SRR18186478 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928655 ILLUMINA 11447992822 bp
SRR18186479 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928654 ILLUMINA 11656917630 bp
SRR18186480 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928653 ILLUMINA 11219717666 bp
SRR18186481 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928652 ILLUMINA 10385066676 bp
SRR18186482 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928651 ILLUMINA 11340886710 bp
SRR18186483 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928650 ILLUMINA 11739039584 bp
SRR18186484 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928649 ILLUMINA 10635293306 bp
SRR18186485 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928648 ILLUMINA 10754764808 bp
SRR18186486 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Nucellus, "Egan No.1" ponkan, GSM5928647 ILLUMINA 11074924068 bp
SRR18186487 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928646 ILLUMINA 11070515774 bp
SRR18186488 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928645 ILLUMINA 10561649096 bp
SRR18186489 RNA-Seq of Citrus reticulata:32 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928644 ILLUMINA 11236761942 bp
SRR18186490 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928643 ILLUMINA 10459615678 bp
SRR18186491 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928642 ILLUMINA 11015859210 bp
SRR18186492 RNA-Seq of Citrus reticulata:28 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928641 ILLUMINA 10792838250 bp
SRR18186493 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928640 ILLUMINA 10695067562 bp
SRR18186494 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928639 ILLUMINA 11193391722 bp
SRR18186495 RNA-Seq of Citrus reticulata:18 day after pollening plant with ovule Nucellus, "Huagan No.4" ponkan, GSM5928638 ILLUMINA 11485785706 bp
PRJNA883800 The transcriptome of leaf midrib and fruit pith Cui et al., 2022
12
Library Title Platform Total Base VCF File
SRR21707709 RNA-Seq of Citrus reticulata:6 years old plant with leaf from China, ‘Shatangju’, HL3T ILLUMINA 6127307000 bp
SRR21707710 RNA-Seq of Citrus reticulata:6 years old plant with leaf from China, ‘Shatangju’, HL1T ILLUMINA 8295128250 bp
SRR21707711 RNA-Seq of Citrus reticulata:6 years old plant with fruit from China, ‘Shatangju’, HF3T ILLUMINA 3181030500 bp
SRR21707712 RNA-Seq of Citrus reticulata:6 years old plant with fruit from China, ‘Shatangju’, HF2T ILLUMINA 11069274000 bp
SRR21708789 RNA-Seq of Citrus reticulata:6 years old plant with leaf from China, ‘Shatangju’, HL2T ILLUMINA 7520921750 bp
SRR21708790 RNA-Seq of Citrus reticulata:6 years old plant with diseased leaf from China, ‘Shatangju’, DL3T ILLUMINA 6328555750 bp
SRR21708791 RNA-Seq of Citrus reticulata:6 years old plant with diseased leaf from China, ‘Shatangju’, DL2T ILLUMINA 6292272300 bp
SRR21708792 RNA-Seq of Citrus reticulata:6 years old plant with diseased leaf from China, ‘Shatangju’, DL1T ILLUMINA 6098675700 bp
SRR21708793 RNA-Seq of Citrus reticulata:6 years old plant with fruit from China, ‘Shatangju’, HF1T ILLUMINA 7889286000 bp
SRR21708794 RNA-Seq of Citrus reticulata:6 years old plant with diseased fruit from China, ‘Shatangju’, DF3T ILLUMINA 7394591400 bp
SRR21708795 RNA-Seq of Citrus reticulata:6 years old plant with diseased fruit from China, ‘Shatangju’, DF2T ILLUMINA 6799901700 bp
SRR21708796 RNA-Seq of Citrus reticulata:6 years old plant with diseased fruit from China, ‘Shatangju’, DF1T ILLUMINA 6705950100 bp
PRJNA885437 Transcriptome analyses reveal delayed decay under naringin treatment in citrus Zeng et al., 2022
9
Library Title Platform Total Base VCF File
SRR21754290 RNA-Seq of Citrus reticulata:naringin treatment peel biological replicate 3 from China: Nanchang, Nanfeng mandarin, Nar3 ILLUMINA 6129575100 bp
SRR21754291 RNA-Seq of Citrus reticulata:naringin treatment peel biological replicate 2 from China: Nanchang, Nanfeng mandarin, Nar2 ILLUMINA 6430527600 bp
SRR21754292 RNA-Seq of Citrus reticulata:naringin treatment peel biological replicate 1 from China: Nanchang, Nanfeng mandarin, Nar1 ILLUMINA 6433380300 bp
SRR21754293 RNA-Seq of Citrus reticulata:control treatment peel biological replicate 3 from China: Nanchang, Nanfeng mandarin, CK3 ILLUMINA 6880222800 bp
SRR21754294 RNA-Seq of Citrus reticulata:control treatment peel biological replicate 2 from China: Nanchang, Nanfeng mandarin, CK2 ILLUMINA 5945532600 bp
SRR21754295 RNA-Seq of Citrus reticulata:control treatment peel biological replicate 1 from China: Nanchang, Nanfeng mandarin, CK1 ILLUMINA 5763144600 bp
SRR21754296 RNA-Seq of Citrus reticulata:fresh-harvest treatment peel biological replicate 3 from China: Nanchang, Nanfeng mandarin, FH3 ILLUMINA 6989406900 bp
SRR21754297 RNA-Seq of Citrus reticulata:fresh-harvest treatment peel biological replicate 2 from China: Nanchang, Nanfeng mandarin, FH2 ILLUMINA 7771112100 bp
SRR21754298 RNA-Seq of Citrus reticulata:fresh-harvest treatment peel biological replicate 1 from China: Nanchang, Nanfeng mandarin, FH1 ILLUMINA 7650496500 bp
PRJNA954191 Combined metabolome and transcriptome analysis revealed the distribution characteristics of secondary metabolites in Citrus reticulata 'Ponkan' Liang et al., 2024
36
Library Title Platform Total Base VCF File
SRR24125307 RNA-Seq of Citrus reticulata:fruit maturity stage plant with main stem biological replicate 1 from China: Zhejiang, Ponkan, Main_Stem_1 ILLUMINA 10493977200 bp
SRR24125308 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit juice sacs biological replicate 3 from China: Zhejiang, Ponkan, Juice_Sacs_3 ILLUMINA 9331933800 bp
SRR24125309 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit juice sacs biological replicate 2 from China: Zhejiang, Ponkan, Juice_Sacs_2 ILLUMINA 6985987200 bp
SRR24125310 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit juice sacs biological replicate 1 from China: Zhejiang, Ponkan, Juice_Sacs_1 ILLUMINA 7536008700 bp
SRR24125311 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit flavedo biological replicate 3 from China: Zhejiang, Ponkan, Flavedo_3 ILLUMINA 7274571000 bp
SRR24125312 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit flavedo biological replicate 2 from China: Zhejiang, Ponkan, Flavedo_2 ILLUMINA 7448001600 bp
SRR24125313 RNA-Seq of Citrus reticulata:fruit maturity stage plant with young leaf biological replicate 3 from China: Zhejiang, Ponkan, Young_leaf_3 ILLUMINA 8626473900 bp
SRR24125314 RNA-Seq of Citrus reticulata:fruit maturity stage plant with young leaf biological replicate 2 from China: Zhejiang, Ponkan, Young_leaf_2 ILLUMINA 7741835400 bp
SRR24125315 RNA-Seq of Citrus reticulata:fruit maturity stage plant with young leaf biological replicate 1 from China: Zhejiang, Ponkan, Young_leaf_1 ILLUMINA 7506397200 bp
SRR24125316 RNA-Seq of Citrus reticulata:fruit maturity stage plant with tender bine biological replicate 3 from China: Zhejiang, Ponkan, Tender_Bine_3 ILLUMINA 9632238300 bp
SRR24125317 RNA-Seq of Citrus reticulata:fruit maturity stage plant with tender bine biological replicate 2 from China: Zhejiang, Ponkan, Tender_Bine_2 ILLUMINA 8173629000 bp
SRR24125318 RNA-Seq of Citrus reticulata:fruit maturity stage plant with tender bine biological replicate 1 from China: Zhejiang, Ponkan, Tender_Bine_1 ILLUMINA 9621212100 bp
SRR24125319 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit flavedo biological replicate 1 from China: Zhejiang, Ponkan, Flavedo_1 ILLUMINA 6901782300 bp
SRR24125320 RNA-Seq of Citrus reticulata:fruit maturity stage plant with tangerine pith biological replicate 3 from China: Zhejiang, Ponkan, Tangerine_Pith_3 ILLUMINA 6592146900 bp
SRR24125321 RNA-Seq of Citrus reticulata:fruit maturity stage plant with tangerine pith biological replicate 2 from China: Zhejiang, Ponkan, Tangerine_Pith_2 ILLUMINA 6871186500 bp
SRR24125322 RNA-Seq of Citrus reticulata:fruit maturity stage plant with tangerine pith biological replicate 1 from China: Zhejiang, Ponkan, Tangerine_Pith_1 ILLUMINA 7459707600 bp
SRR24125323 RNA-Seq of Citrus reticulata:fruit maturity stage plant with side branch biological replicate 3 from China: Zhejiang, Ponkan, Side_Branch_3 ILLUMINA 10004436300 bp
SRR24125324 RNA-Seq of Citrus reticulata:fruit maturity stage plant with side branch biological replicate 2 from China: Zhejiang, Ponkan, Side_Branch_2 ILLUMINA 9381448500 bp
SRR24125325 RNA-Seq of Citrus reticulata:fruit maturity stage plant with side branch biological replicate 1 from China: Zhejiang, Ponkan, Side_Branch_1 ILLUMINA 8339199000 bp
SRR24125326 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit segment membrane biological replicate 3 from China: Zhejiang, Ponkan, Segment_Membrane_3 ILLUMINA 7336389000 bp
SRR24125327 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit segment membrane biological replicate 2 from China: Zhejiang, Ponkan, Segment_Membrane_2 ILLUMINA 6949883700 bp
SRR24125328 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit segment membrane biological replicate 1 from China: Zhejiang, Ponkan, Segment_Membrane_1 ILLUMINA 6564901500 bp
SRR24125329 RNA-Seq of Citrus reticulata:fruit maturity stage plant with seed biological replicate 3 from China: Zhejiang, Ponkan, Seed_3 ILLUMINA 8073784500 bp
SRR24125330 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit albedo biological replicate 3 from China: Zhejiang, Ponkan, Albedo_3 ILLUMINA 7005809100 bp
SRR24125331 RNA-Seq of Citrus reticulata:fruit maturity stage plant with seed biological replicate 2 from China: Zhejiang, Ponkan, Seed_2 ILLUMINA 8324074200 bp
SRR24125332 RNA-Seq of Citrus reticulata:fruit maturity stage plant with seed biological replicate 1 from China: Zhejiang, Ponkan, Seed_1 ILLUMINA 9926191800 bp
SRR24125333 RNA-Seq of Citrus reticulata:fruit maturity stage plant with root biological replicate 3 from China: Zhejiang, Ponkan, Root_3 ILLUMINA 9497160900 bp
SRR24125334 RNA-Seq of Citrus reticulata:fruit maturity stage plant with root biological replicate 2 from China: Zhejiang, Ponkan, Root_2 ILLUMINA 7761307800 bp
SRR24125335 RNA-Seq of Citrus reticulata:fruit maturity stage plant with root biological replicate 1 from China: Zhejiang, Ponkan, Root_1 ILLUMINA 9901799700 bp
SRR24125336 RNA-Seq of Citrus reticulata:fruit maturity stage plant with mature leaf biological replicate 3 from China: Zhejiang, Ponkan, Mature_leaf_3 ILLUMINA 7625310600 bp
SRR24125337 RNA-Seq of Citrus reticulata:fruit maturity stage plant with mature leaf biological replicate 2 from China: Zhejiang, Ponkan, Mature_leaf_2 ILLUMINA 6824294400 bp
SRR24125338 RNA-Seq of Citrus reticulata:fruit maturity stage plant with mature leaf biological replicate 1 from China: Zhejiang, Ponkan, Mature_leaf_1 ILLUMINA 6854485200 bp
SRR24125339 RNA-Seq of Citrus reticulata:fruit maturity stage plant with main stem biological replicate 3 from China: Zhejiang, Ponkan, Main_Stem_3 ILLUMINA 7373978700 bp
SRR24125340 RNA-Seq of Citrus reticulata:fruit maturity stage plant with main stem biological replicate 2 from China: Zhejiang, Ponkan, Main_Stem_2 ILLUMINA 7375409700 bp
SRR24125341 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit albedo biological replicate 2 from China: Zhejiang, Ponkan, Albedo_2 ILLUMINA 7045144200 bp
SRR24125342 RNA-Seq of Citrus reticulata:fruit maturity stage plant with fruit albedo biological replicate 1 from China: Zhejiang, Ponkan, Albedo_1 ILLUMINA 7059287700 bp
PRJNA977630 RNAseq data for fruit juice from multiple citrus cultivars Fan et al., 2024
10
Library Title Platform Total Base VCF File
SRR24937679 RNA-Seq of Citrus reticulata:ripe fruit from USA, US SunDragon ILLUMINA 7232204100 bp
SRR24927883 RNA-Seq of Citrus reticulata:ripe fruit from USA, Donaldson ILLUMINA 5589603600 bp
SRR24927886 RNA-Seq of Citrus reticulata:ripe fruit from USA, FF1-5-213-1 ILLUMINA 7239528900 bp
SRR24927887 RNA-Seq of Citrus reticulata:ripe fruit from USA, TOBIAS ILLUMINA 7639573200 bp
SRR24927888 RNA-Seq of Citrus reticulata:ripe fruit from USA, BOWER ILLUMINA 8396198100 bp
SRR24927889 RNA-Seq of Citrus reticulata:ripe fruit from USA, FF1-89-11 ILLUMINA 6110388300 bp
SRR24927914 RNA-Seq of Citrus reticulata:ripe fruit from USA, FTP-6-32-67 ILLUMINA 7047556200 bp
SRR24927917 RNA-Seq of Citrus reticulata:ripe fruit from USA, FF5-51-2 ILLUMINA 6450266100 bp
SRR24928008 RNA-Seq of Citrus reticulata:ripe fruit from USA, FF1-89-84 ILLUMINA 7838968200 bp
SRR24928167 RNA-Seq of Citrus reticulata:ripe fruit from USA, FF5-6-36 ILLUMINA 6974685300 bp
PRJNA992761 Citrus reticulata Raw sequence reads Wang et al., 2023
12
Library Title Platform Total Base VCF File
SRR25212074 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 9 from China:Chongqing, Wangjingcheng, WT_32_2-1, S620 ILLUMINA 6072120864 bp
SRR25212075 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 7 from China:Chongqing, Wangjingcheng, WT_32_1-1, S618 ILLUMINA 6560566404 bp
SRR25212076 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 5 from China:Chongqing, Wangjingcheng, WT_25_3-1, S616 ILLUMINA 6296600256 bp
SRR25212077 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 23 from China:Chongqing, Wangjingcheng, L5_32_3-1, S634 ILLUMINA 6274460280 bp
SRR25212078 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 21 from China:Chongqing, Wangjingcheng, L5_32_2-1, S632 ILLUMINA 5780543290 bp
SRR25212079 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 3 from China:Chongqing, Wangjingcheng, WT_25_2-1, S614 ILLUMINA 6262709176 bp
SRR25212080 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 19 from China:Chongqing, Wangjingcheng, L5_32_1-1, S630 ILLUMINA 5896471674 bp
SRR25212081 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 17 from China:Chongqing, Wangjingcheng, L5_25_3-1, S628 ILLUMINA 6037282070 bp
SRR25212082 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 15 from China:Chongqing, Wangjingcheng, L5_25_2-1, S626 ILLUMINA 6162156888 bp
SRR25212083 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 13 from China:Chongqing, Wangjingcheng, L5_25_1-1, S624 ILLUMINA 5961526776 bp
SRR25212084 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 11 from China:Chongqing, Wangjingcheng, WT_32_3-1, S622 ILLUMINA 6637284484 bp
SRR25212085 RNA-Seq of Citrus reticulata:leaves replicate=biological replicate 1 from China:Chongqing, Wangjingcheng, WT_25_1-1, S612 ILLUMINA 5799573958 bp
PRJNA999253 Changes of Transcriptome after GZM Treatment -
6
Library Title Platform Total Base VCF File
SRR25461105 RNA-Seq of Citrus reticulata:5 years old tree 9 after GZM treatment with leaves from China: Guangdong, Chachiensis, T-4-2_1 ILLUMINA 10781244900 bp
SRR25461106 RNA-Seq of Citrus reticulata:5 years old tree 7 after GZM treatment with leaves from China: Guangdong, Chachiensis, T-4-1_1 ILLUMINA 9625069800 bp
SRR25461107 RNA-Seq of Citrus reticulata:5 years old tree 5 after GZM treatment with leaves from China: Guangdong, Chachiensis, CK-4-3_1 ILLUMINA 8827174800 bp
SRR25461108 RNA-Seq of Citrus reticulata:5 years old tree 3 after GZM treatment with leaves from China: Guangdong, Chachiensis, CK-4-2_1 ILLUMINA 8478442500 bp
SRR25461109 RNA-Seq of Citrus reticulata:5 years old tree 11 after GZM treatment with leaves from China: Guangdong, Chachiensis, T-4-3_1 ILLUMINA 7457675100 bp
SRR25461110 RNA-Seq of Citrus reticulata:5 years old tree 1 after GZM treatment with leaves from China: Guangdong, Chachiensis, CK-4-1_1 ILLUMINA 9217415100 bp

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