Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
Others

Project

Bioproject Description Publication GVCF File Library Num.
PRJNA1015406 The flower buds of fingered citron at DOA (the day of anthesis) was used to construct a cDNA library, which was then sequenced using the Illumina High-throughput sequencing platform of BIOMARKER Technologies (BMKGENE) (Beijing, China). -
1
Library Title Platform Total Base VCF File
SRR26037348 RNA-Seq of Citrus medica: the day of anthesis stage flower buds from China: Jinhua, Cm01 ILLUMINA 5980702816 bp
PRJNA1054398 This study is the first to report the differences in the metabolic and transcriptome profiles of CM fruit under Different stages, which improves our understanding of the main metabolites and their molecular mechanisms in CM fruit active ingredient . -
9
Library Title Platform Total Base VCF File
SRR27283758 RNA-Seq of Citrus medica: 3 years plant with 135 days of pollination fruit from China: Nanning, D135 ILLUMINA 7166672004 bp
SRR27283759 RNA-Seq of Citrus medica: 3 years plant with 135 days of pollination fruit from China: Nanning, D135 ILLUMINA 6663456350 bp
SRR27283760 RNA-Seq of Citrus medica: 3 years plant with 135 days of pollination fruit from China: Nanning, D135 ILLUMINA 6926775586 bp
SRR27283761 RNA-Seq of Citrus medica: 3 years plant with 90 days of pollination fruit from China: Nanning, D90 ILLUMINA 7658642386 bp
SRR27283762 RNA-Seq of Citrus medica: 3 years plant with 90 days of pollination fruit from China: Nanning, D90 ILLUMINA 7751267296 bp
SRR27283763 RNA-Seq of Citrus medica: 3 years plant with 90 days of pollination fruit from China: Nanning, D90 ILLUMINA 7195393110 bp
SRR27283764 RNA-Seq of Citrus medica: 3 years plant with 45 days of pollination fruit from China: Nanning, D45 ILLUMINA 6639014886 bp
SRR27283765 RNA-Seq of Citrus medica: 3 years plant with 45 days of pollination fruit from China: Nanning, D45 ILLUMINA 6099307062 bp
SRR27283766 RNA-Seq of Citrus medica: 3 years plant with 45 days of pollination fruit from China: Nanning, D45 ILLUMINA 5414849128 bp
PRJNA341284 the transcriptome sequence of Citrus medica Wang et al., 2017
13
Library Title Platform Total Base VCF File
SRR4158230 RNA-Seq of Citrus medica: mature plant with embryo from China, LM1-1 ILLUMINA 6060413500 bp
SRR4159471 RNA-Seq of Citrus medica: mature plant with embryo from China, LM1-2 ILLUMINA 7733129750 bp
SRR4102052 RNA-Seq of Citrus medica: young plant with embryo from China, JY1-1 ILLUMINA 5911517750 bp
SRR4102094 RNA-Seq of Citrus medica: young plant with embryo from China, JY1-2 ILLUMINA 6495057000 bp
SRR4102357 RNA-Seq of Citrus medica: mature plant with embryo from China, JY2-1 ILLUMINA 5412560500 bp
SRR4102488 RNA-Seq of Citrus medica: mature plant with embryo from China, JY2-2 ILLUMINA 6194712250 bp
SRR5860787 RNA-Seq of Citrus medica: mature plant with fruit from China, JYH ILLUMINA 11712974400 bp
SRR7719397 RNA-Seq of Citrus medica: young plant with embryo from China, JY1-2 ILLUMINA 9078138600 bp
SRR7719420 RNA-Seq of Citrus medica: mature plant with embryo from China, JY2-2 ILLUMINA 10859020800 bp
SRR7719422 RNA-Seq of Citrus medica: mature plant with embryo from China, LM1-2 ILLUMINA 9489181200 bp
SRR7719530 RNA-Seq of Citrus medica: late-stage ovules from China, LM2 ILLUMINA 9738845400 bp
SRR6356297 RNA-Seq of Citrus medica: late-stage ovules from China, LM2 ILLUMINA 6882567250 bp
SRR6356300 RNA-Seq of Citrus medica: late-stage ovules from China, LM2 ILLUMINA 6103995750 bp
PRJNA605866 TCP transcription factors regulate thorn identity via modulating stem cell homeostasis -
3
Library Title Platform Total Base VCF File
SRR11116077 RNA-Seq of Citrus medica: flushing stage plant with vegetative young shoots from USA: California\, Riverside\, greenhouse, reili, KEYLIMEM4-PE-IL6-1_GCCAAT_L004 ILLUMINA 2574800676 bp
SRR11116078 RNA-Seq of Citrus medica: flushing stage plant with vegetative young shoots from USA: California\, Riverside\, greenhouse, reili, KEYLIMEM3-PE-IL5-1_ACAGTG_L004 ILLUMINA 2981118222 bp
SRR11116079 RNA-Seq of Citrus medica: flushing stage plant with vegetative young shoots from USA: California\, Riverside\, greenhouse, reili, KEYLIMEM2-PE-IL4-1_TGACCA_L004 ILLUMINA 1108716592 bp
PRJNA785525 We selected seven Citrus species and performed RNA-seq at the color break. Borredá et al., 2022
6
Library Title Platform Total Base VCF File
SRR24928224 RNA-Seq of Citrus medica: ripening fruits at color break flavedo from Spain: Valencia, Diamante, B560_F ILLUMINA 6516955500 bp
SRR24928225 RNA-Seq of Citrus medica: ripening fruits at color break flavedo from Spain: Valencia, Diamante, B560_F ILLUMINA 6586185000 bp
SRR24928226 RNA-Seq of Citrus medica: ripening fruits at color break flavedo from Spain: Valencia, Diamante, B560_F ILLUMINA 6123363600 bp
SRR24928239 RNA-Seq of Citrus medica: ripening fruits at color break pulp from Spain: Valencia, Diamante, B560_P ILLUMINA 9251678400 bp
SRR24928240 RNA-Seq of Citrus medica: ripening fruits at color break pulp from Spain: Valencia, Diamante, B560_P ILLUMINA 1501622700 bp
SRR24928241 RNA-Seq of Citrus medica: ripening fruits at color break pulp from Spain: Valencia, Diamante, B560_P ILLUMINA 10460999400 bp

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