Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
Others

Project

Bioproject Description Publication GVCF File Library Num.
PRJNA312760 The project will be benefit us to understand the formation of azadirachtin in vivo, also shows potential targets to regulate the existing research strategies in order to harvest more environment-friendly biopesticides. -
3
Library Title Platform Total Base VCF File
SRR3180937 RNA-Seq of Azadirachta indica: 2 years wild type plant with leaf from China: greenhouse in China Academy of Froestry\, Beijing, Neem-leaf-Y1 ILLUMINA 5820550242 bp
SRR3181105 RNA-Seq of Azadirachta indica: 2 years wild type plant with leaf from China: greenhouse in China Academy of Froestry\, Beijing, Neem-leaf-Y2 ILLUMINA 5537418082 bp
SRR3181166 RNA-Seq of Azadirachta indica: 2 years wild type plant with leaf from China: greenhouse in China Academy of Froestry\, Beijing, Neem-leaf-Y3 ILLUMINA 7083668168 bp
PRJNA386613 Tissue Specific transcriptome analysis for identification of genes involved in triterpenoid biosynthesis -
4
Library Title Platform Total Base VCF File
SRR5576327 RNA-Seq of Azadirachta indica: flowering stage plant with flower from India: Pune ILLUMINA 7611653904 bp
SRR5576328 RNA-Seq of Azadirachta indica: flowering stage plant with leaf from India: Pune ILLUMINA 7478106786 bp
SRR5576329 RNA-Seq of Azadirachta indica: ripening stage plant with pericarp from India: Pune ILLUMINA 8037373942 bp
SRR5576330 RNA-Seq of Azadirachta indica: ripening stage plant with kernel from India: Pune ILLUMINA 8565167866 bp
PRJNA590058 PacBio SMRT, transcriptome raw reads, Azadirachta Indica A.Juss, mixed tissues( root, leaf, flower, stem and fruit) Wang et al., 2020
6
Library Title Platform Total Base VCF File
SRR10488719 RNA-Seq of Azadirachta indica: fruit stage plant with mixed tissues of root\, leaf\, flower\, stem and fruit from China: Hainan PACBIO_SMRT 11278696896 bp
SRR12709581 RNA-Seq of Azadirachta indica: fruit stage plant with fruit from China: Hainan ILLUMINA 6095342700 bp
SRR12709582 RNA-Seq of Azadirachta indica: fruit stage plant with flower from China: Hainan ILLUMINA 6090646800 bp
SRR12709583 RNA-Seq of Azadirachta indica: fruit stage plant with stem from China: Hainan ILLUMINA 6170889600 bp
SRR12709584 RNA-Seq of Azadirachta indica: fruit stage plant with root from China: Hainan ILLUMINA 6089142000 bp
SRR12709585 RNA-Seq of Azadirachta indica: fruit stage plant with leaf from China: Hainan ILLUMINA 6201992700 bp
PRJNA645650 The chromosome-scale assembly of the Azadirachta indica Du et al., 2022
2
Library Title Platform Total Base VCF File
SRR12321284 RNA-Seq of Azadirachta indica: the fruiting period stage plant with root and stem and leaf and fruit and seed from China:Hainan, Sample_NGS-RNA ILLUMINA 6170889600 bp
SRR12321711 RNA-Seq of Azadirachta indica: the fruiting period stage plant with root and stem and leaf and fruit and seed from China:Hainan, Sample_TGS-RNA PACBIO_SMRT 11278696896 bp

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