| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJNA491190 |
Bisulfite treatment libraries were made to characterize the DNA methylome of tea tree Overall design: Genome-wide methylome was done by Illumina TruSeq preparation kits followed by high-throughput sequencing with Illumina HiSeqX-ten |
Wang et al., 2018 |
 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR7832304 |
RNA-Seq of Camellia sinensis var. assamica: young leaf, GSM3391420 |
ILLUMINA |
15481032300 bp |
|
| SRR7832305 |
RNA-Seq of Camellia sinensis var. assamica: young leaf, GSM3391421 |
ILLUMINA |
16812803100 bp |
|
|
| PRJNA665925 |
Pan-transcriptome sequencing of Camellia plants |
Wu et al., 2022 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR19266668 |
RNA-Seq of Camellia sinensis var. assamica: leaf from China:Guangdong, YH9, (13-30) |
ILLUMINA |
8103553028 bp |
|
| SRR19266669 |
RNA-Seq of Camellia sinensis var. assamica: leaf from China:Yunnan, ZJ, (13-29) |
ILLUMINA |
6210387088 bp |
|
| SRR19266725 |
RNA-Seq of Camellia sinensis var. assamica: leaf from China:Yunnan, YK10, (13-15) |
ILLUMINA |
6299455262 bp |
|
|
| PRJNA808810 |
Transcriptome and metabolomics analysis of flavonoid synthesis mechanism in fresh leaves of Tea from Chengbuadong in different colors |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR18111237 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, ZDCN3 |
ILLUMINA |
8131682100 bp |
|
| SRR18111238 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, ZDCN2 |
ILLUMINA |
6375699300 bp |
|
| SRR18111239 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, ZDCN1 |
ILLUMINA |
6279504300 bp |
|
| SRR18111240 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, QDCN3 |
ILLUMINA |
8704381800 bp |
|
| SRR18111241 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, QDCN2 |
ILLUMINA |
7048014000 bp |
|
| SRR18111242 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, QDCN1 |
ILLUMINA |
7454368800 bp |
|
| SRR18111243 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, HDCN3 |
ILLUMINA |
6609645300 bp |
|
| SRR18111244 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, HDCN2 |
ILLUMINA |
6852177600 bp |
|
| SRR18111245 |
RNA-Seq of Camellia sinensis var. assamica: tender leaves from China: Hunan\,Shaoyang, Duntsa, HDCN1 |
ILLUMINA |
6362532600 bp |
|
|
| PRJNA892967 |
Integrated metabolomic and transcriptomic analysis reveals amino acid biosynthesis may determine differences in cold resistance of tea plants |
Cheng et al., 2023 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR22006963 |
RNA-Seq of Camellia sinensis var. assamica: low temperature (10 °c during the day and 4 °c at night) treatment for 7 days. subsequently\, freezing acclimation was performed by 4°c daytime\, 0°c night exposure for 7 days (ca-treated) treatment seedlings(height of 4-5 cm), YH9, GSM6668428 |
ILLUMINA |
5004202318 bp |
|
| SRR22006964 |
RNA-Seq of Camellia sinensis var. assamica: low temperature (10 °c during the day and 4 °c at night) treatment for 7 days. subsequently\, freezing acclimation was performed by 4°c daytime\, 0°c night exposure for 7 days (ca-treated) treatment seedlings(height of 4-5 cm), YH9, GSM6668429 |
ILLUMINA |
6128779514 bp |
|
| SRR22006965 |
RNA-Seq of Camellia sinensis var. assamica: low temperature (10 °c during the day and 4 °c at night) treatment for 7 days. subsequently\, freezing acclimation was performed by 4°c daytime\, 0°c night exposure for 7 days (ca-treated) treatment seedlings(height of 4-5 cm), YH9, GSM6668430 |
ILLUMINA |
5363235310 bp |
|
| SRR22006966 |
RNA-Seq of Camellia sinensis var. assamica: ca-treated plants were exposed to normal temperature (25°c daytime\, 20°c night)for 7 days treatment seedlings(height of 4-5 cm), YH9, GSM6668431 |
ILLUMINA |
6907393930 bp |
|
| SRR22006967 |
RNA-Seq of Camellia sinensis var. assamica: ca-treated plants were exposed to normal temperature (25°c daytime\, 20°c night)for 7 days treatment seedlings(height of 4-5 cm), YH9, GSM6668432 |
ILLUMINA |
5371975842 bp |
|
| SRR22006968 |
RNA-Seq of Camellia sinensis var. assamica: ca-treated plants were exposed to normal temperature (25°c daytime\, 20°c night)for 7 days treatment seedlings(height of 4-5 cm), YH9, GSM6668433 |
ILLUMINA |
4912397125 bp |
|
| SRR22006969 |
RNA-Seq of Camellia sinensis var. assamica: normal temperature (25°c daytime\, 20°c night) treatment seedlings(height of 4-5 cm), YH9, GSM6668425 |
ILLUMINA |
4566364906 bp |
|
| SRR22006970 |
RNA-Seq of Camellia sinensis var. assamica: normal temperature (25°c daytime\, 20°c night) treatment seedlings(height of 4-5 cm), YH9, GSM6668426 |
ILLUMINA |
7505121396 bp |
|
| SRR22006971 |
RNA-Seq of Camellia sinensis var. assamica: normal temperature (25°c daytime\, 20°c night) treatment seedlings(height of 4-5 cm), YH9, GSM6668427 |
ILLUMINA |
6458660743 bp |
|
|
| PRJNA970189 |
Comparative Genomics and Omics Study on the Adaptive Evolution of Fruit Metabolism content of Camellia Species |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR24821531 |
RNA-Seq of Camellia sinensis var. assamica: kernel from China: Zhejiang\,Jinhua, CSA Kernel |
ILLUMINA |
7405706700 bp |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
2