Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
PRJNA549496 |
RNA-Seq and genome assembly of wild long-lived perennial Populus trichocarpa |
- |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR9321772 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897060 |
ILLUMINA |
3603748936 bp |
|
SRR9321773 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897061 |
ILLUMINA |
4225315272 bp |
|
SRR9321774 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897062 |
ILLUMINA |
4426976104 bp |
|
SRR9321775 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897063 |
ILLUMINA |
4228552031 bp |
|
SRR9321776 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897064 |
ILLUMINA |
4036984418 bp |
|
SRR9321777 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897065 |
ILLUMINA |
3837738059 bp |
|
SRR9321778 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897066 |
ILLUMINA |
4235948388 bp |
|
SRR9321779 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897067 |
ILLUMINA |
4258099662 bp |
|
SRR9321780 |
RNA-Seq of Populus trichocarpa: leaf, GSM3897068 |
ILLUMINA |
3678351538 bp |
|
SRR9668895 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937576 |
ILLUMINA |
3506146421 bp |
|
SRR9668896 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937577 |
ILLUMINA |
3648081656 bp |
|
SRR9668897 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937578 |
ILLUMINA |
3595103374 bp |
|
SRR9668898 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937579 |
ILLUMINA |
3517956744 bp |
|
SRR9668899 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937580 |
ILLUMINA |
3428935078 bp |
|
SRR9668900 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937581 |
ILLUMINA |
3581338733 bp |
|
SRR9668901 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937582 |
ILLUMINA |
3970073495 bp |
|
SRR9668902 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937583 |
ILLUMINA |
3779040607 bp |
|
SRR9668903 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937584 |
ILLUMINA |
4595310969 bp |
|
SRR9668904 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937585 |
ILLUMINA |
4244605603 bp |
|
SRR9668905 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937586 |
ILLUMINA |
4316346338 bp |
|
SRR9668906 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937587 |
ILLUMINA |
4314339949 bp |
|
SRR9668907 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937588 |
ILLUMINA |
4311484784 bp |
|
SRR9668908 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937589 |
ILLUMINA |
4505894112 bp |
|
SRR9668909 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937590 |
ILLUMINA |
4472891374 bp |
|
SRR9668910 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937591 |
ILLUMINA |
3949296777 bp |
|
SRR9668911 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937592 |
ILLUMINA |
4518036375 bp |
|
SRR9668912 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937593 |
ILLUMINA |
4829762593 bp |
|
SRR9668913 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937594 |
ILLUMINA |
4682752719 bp |
|
SRR9668914 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937595 |
ILLUMINA |
5100146080 bp |
|
SRR9668915 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937596 |
ILLUMINA |
4370273449 bp |
|
SRR9668916 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937597 |
ILLUMINA |
5573687047 bp |
|
SRR9668917 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937598 |
ILLUMINA |
6052057705 bp |
|
SRR9668918 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937599 |
ILLUMINA |
6043971621 bp |
|
SRR9668919 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937600 |
ILLUMINA |
5645209348 bp |
|
SRR9668920 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937601 |
ILLUMINA |
5429544439 bp |
|
SRR9668921 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937602 |
ILLUMINA |
5723680228 bp |
|
SRR9668922 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937603 |
ILLUMINA |
5551557094 bp |
|
SRR9668923 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937604 |
ILLUMINA |
4928508865 bp |
|
SRR9668924 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937605 |
ILLUMINA |
5292596199 bp |
|
SRR9668925 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937606 |
ILLUMINA |
5570475982 bp |
|
SRR9668926 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937607 |
ILLUMINA |
4759270608 bp |
|
SRR9668927 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937608 |
ILLUMINA |
4675678520 bp |
|
SRR9668928 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937609 |
ILLUMINA |
5652063758 bp |
|
SRR9668929 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937610 |
ILLUMINA |
5785369938 bp |
|
SRR9668930 |
RNA-Seq of Populus trichocarpa: leaf, GSM3937611 |
ILLUMINA |
5996921562 bp |
|
|
PRJNA630668 |
RNA-seq of MYB161 overexpression plants |
Wang et al., 2020 |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR11701742 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_9_B1 |
ILLUMINA |
4858512900 bp |
|
SRR11701743 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_8_B3 |
ILLUMINA |
5501393400 bp |
|
SRR11701744 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_8_B2 |
ILLUMINA |
5703055800 bp |
|
SRR11701745 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_8_B1 |
ILLUMINA |
5643217200 bp |
|
SRR11701746 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_5_B3 |
ILLUMINA |
5827621500 bp |
|
SRR11701747 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_5_B2 |
ILLUMINA |
5694719700 bp |
|
SRR11701748 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_5_B1 |
ILLUMINA |
5810398800 bp |
|
SRR11701749 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, WT_B3 |
ILLUMINA |
4936260900 bp |
|
SRR11701750 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_9_B3 |
ILLUMINA |
6744975600 bp |
|
SRR11701751 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, OE_161_9_B2 |
ILLUMINA |
4970910900 bp |
|
SRR11701752 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, WT_B2 |
ILLUMINA |
5222760000 bp |
|
SRR11701753 |
RNA-Seq of Populus trichocarpa: 4 month plant with stem differentiating xylem, WT_B1 |
ILLUMINA |
6268763700 bp |
|
|
PRJNA644110 |
RNAseq of bending treated Populus trichocarpa |
- |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR12145817 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654181 |
ILLUMINA |
2163792800 bp |
|
SRR12145818 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654182 |
ILLUMINA |
2765583600 bp |
|
SRR12145819 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654183 |
ILLUMINA |
2147768800 bp |
|
SRR12145820 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654184 |
ILLUMINA |
1975398100 bp |
|
SRR12145821 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654185 |
ILLUMINA |
2193180200 bp |
|
SRR12145822 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654186 |
ILLUMINA |
2066984000 bp |
|
SRR12145823 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654187 |
ILLUMINA |
2766334500 bp |
|
SRR12145824 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654188 |
ILLUMINA |
2126465300 bp |
|
SRR12145825 |
RNA-Seq of Populus trichocarpa: stem differentiating xylem, GSM4654189 |
ILLUMINA |
2541284800 bp |
|
|
PRJNA672182 |
RNA Sequence of stem-differentiating xylem in Populus trichocarpa during drought stress |
Gao et al., 2022 |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR12904202 |
RNA-Seq of Populus trichocarpa: 3 month plant with secondary xylem, SDX drought stress |
OXFORD_NANOPORE |
2136484224 bp |
|
SRR12904551 |
RNA-Seq of Populus trichocarpa: 3 month plant with secondary xylem, SDX drought stress |
OXFORD_NANOPORE |
884036893 bp |
|
SRR12904624 |
RNA-Seq of Populus trichocarpa: 3 month plant with secondary xylem, SDX drought stress |
OXFORD_NANOPORE |
2261171941 bp |
|
SRR12904635 |
RNA-Seq of Populus trichocarpa: 3 month plant with secondary xylem, SDX drought stress |
OXFORD_NANOPORE |
1824670160 bp |
|
SRR13336716 |
RNA-Seq of Populus trichocarpa: 3 month plant with secondary xylem, SDX drought stress |
OXFORD_NANOPORE |
806643884 bp |
|
SRR13336717 |
RNA-Seq of Populus trichocarpa: 3 month plant with secondary xylem, SDX drought stress |
OXFORD_NANOPORE |
1070247371 bp |
|
|
PRJNA706666 |
RNA-seq of xylem cells isolated from the upper side of the bent stem in different time point of wild-type Populus trichocarpa |
Yu et al., 2022 |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR13857034 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B7_WT_1 |
ILLUMINA |
8105449500 bp |
|
SRR13857035 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B5_WT3 |
ILLUMINA |
7564763700 bp |
|
SRR13857036 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B5_WT2 |
ILLUMINA |
7126471200 bp |
|
SRR13857037 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B5_WT1 |
ILLUMINA |
7993081800 bp |
|
SRR13857038 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B3_WT3 |
ILLUMINA |
8451407100 bp |
|
SRR13857039 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B3_WT2 |
ILLUMINA |
8301992700 bp |
|
SRR13857041 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B0_WT3 |
ILLUMINA |
7505387700 bp |
|
SRR13857045 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B14_WT3 |
ILLUMINA |
7507293000 bp |
|
SRR13857047 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B14_WT1 |
ILLUMINA |
9924368100 bp |
|
SRR13857049 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B7_WT_2 |
ILLUMINA |
9914643300 bp |
|
SRR13857051 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B0_WT1 |
ILLUMINA |
8525665500 bp |
|
SRR13857040 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B3_WT1 |
ILLUMINA |
8234466300 bp |
|
SRR13857042 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B21_WT3 |
ILLUMINA |
7073247300 bp |
|
SRR13857043 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B21_WT2 |
ILLUMINA |
8225172300 bp |
|
SRR13857044 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B21_WT1 |
ILLUMINA |
7437938400 bp |
|
SRR13857046 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B14_WT2 |
ILLUMINA |
6867207900 bp |
|
SRR13857048 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B7_WT_3 |
ILLUMINA |
7161217500 bp |
|
SRR13857050 |
RNA-Seq of Populus trichocarpa: 4 month plant with xylem cells of TW regions, B0_WT2 |
ILLUMINA |
7946176500 bp |
|
|
PRJNA731020 |
Transcriptome profile in stem-differentiating xylem of Populus trichocarpa |
- |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR14584958 |
RNA-Seq of Populus trichocarpa: 9 month plant with stem-differentiating xylem from Taiwan: Taipei, Nisqually-1, Ptr_bio2_kit109 |
OXFORD_NANOPORE |
84094120 bp |
|
SRR14584965 |
RNA-Seq of Populus trichocarpa: 9 month plant with stem-differentiating xylem from Taiwan: Taipei, Nisqually-1, Ptr_bio1_kit108 |
OXFORD_NANOPORE |
92938643 bp |
|
SRR14584966 |
RNA-Seq of Populus trichocarpa: 9 month plant with stem-differentiating xylem from Taiwan: Taipei, Nisqually-1, Ptr_bio2_kit108 |
OXFORD_NANOPORE |
80920927 bp |
|
SRR14584967 |
RNA-Seq of Populus trichocarpa: 9 month plant with stem-differentiating xylem from Taiwan: Taipei, Nisqually-1, Ptr_bio3_kit108 |
OXFORD_NANOPORE |
59115718 bp |
|
SRR14584969 |
RNA-Seq of Populus trichocarpa: 9 month plant with stem-differentiating xylem from Taiwan: Taipei, Nisqually-1, Ptr_bio1_kit109 |
OXFORD_NANOPORE |
83942092 bp |
|
|
PRJNA746591 |
Single-cell transcriptomics of Populus trichocarpa |
- |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR15142072 |
RNA-Seq of Populus trichocarpa: SDX cells, GSM5453537 |
ILLUMINA |
43421154612 bp |
|
SRR15142080 |
RNA-Seq of Populus trichocarpa: libriform fibers, GSM5453541 |
ILLUMINA |
1158968889 bp |
|
SRR15142081 |
RNA-Seq of Populus trichocarpa: libriform fibers, GSM5453542 |
ILLUMINA |
1023460623 bp |
|
SRR15142082 |
RNA-Seq of Populus trichocarpa: libriform fibers, GSM5453543 |
ILLUMINA |
972664850 bp |
|
SRR15142083 |
RNA-Seq of Populus trichocarpa: vessel elements, GSM5453544 |
ILLUMINA |
878806437 bp |
|
SRR15142084 |
RNA-Seq of Populus trichocarpa: vessel elements, GSM5453545 |
ILLUMINA |
877348190 bp |
|
SRR15142085 |
RNA-Seq of Populus trichocarpa: vessel elements, GSM5453546 |
ILLUMINA |
1043297951 bp |
|
SRR15142086 |
RNA-Seq of Populus trichocarpa: ray parenchyma cells, GSM5453547 |
ILLUMINA |
1104475693 bp |
|
SRR15142087 |
RNA-Seq of Populus trichocarpa: ray parenchyma cells, GSM5453548 |
ILLUMINA |
1068279881 bp |
|
SRR15142088 |
RNA-Seq of Populus trichocarpa: ray parenchyma cells, GSM5453549 |
ILLUMINA |
891666415 bp |
|
SRR23037970 |
RNA-Seq of Populus trichocarpa: SDX cells, GSM6234944 |
ILLUMINA |
5756967984 bp |
|
SRR19625957 |
RNA-Seq of Populus trichocarpa: SDX cells, GSM6234944 |
ILLUMINA |
4327758460 bp |
|
SRR19625959 |
RNA-Seq of Populus trichocarpa: SDX cells, GSM6234945 |
ILLUMINA |
3213984094 bp |
|
SRR19625956 |
RNA-Seq of Populus trichocarpa: SDX cells, GSM6234943 |
ILLUMINA |
87339606600 bp |
|
SRR19625958 |
RNA-Seq of Populus trichocarpa: SDX cells, GSM6234945 |
ILLUMINA |
3175187931 bp |
|
SRR22215328 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718894 |
ILLUMINA |
11915263228 bp |
|
SRR22215329 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718895 |
ILLUMINA |
11762892450 bp |
|
SRR22215330 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718896 |
ILLUMINA |
10367861736 bp |
|
SRR22215331 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718897 |
ILLUMINA |
9702501678 bp |
|
SRR22215332 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718898 |
ILLUMINA |
10159596496 bp |
|
SRR22215333 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718899 |
ILLUMINA |
14325033874 bp |
|
SRR22215334 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718900 |
ILLUMINA |
12119898126 bp |
|
SRR22215335 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718901 |
ILLUMINA |
10953874616 bp |
|
SRR22215336 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718902 |
ILLUMINA |
10184547132 bp |
|
SRR22215337 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718903 |
ILLUMINA |
10620005160 bp |
|
SRR22215338 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718904 |
ILLUMINA |
13648517030 bp |
|
SRR22215339 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718905 |
ILLUMINA |
12263911960 bp |
|
SRR22215340 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718906 |
ILLUMINA |
9618402832 bp |
|
SRR22215341 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718907 |
ILLUMINA |
9829870480 bp |
|
SRR22215342 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718908 |
ILLUMINA |
10696316634 bp |
|
SRR22215343 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718909 |
ILLUMINA |
9809785064 bp |
|
SRR22215344 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718910 |
ILLUMINA |
12621073468 bp |
|
SRR22215345 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718911 |
ILLUMINA |
11835708576 bp |
|
SRR22215346 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718912 |
ILLUMINA |
10013565000 bp |
|
SRR22215347 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718913 |
ILLUMINA |
9791738450 bp |
|
SRR22215348 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718914 |
ILLUMINA |
13070302998 bp |
|
SRR22215349 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718915 |
ILLUMINA |
13058309370 bp |
|
SRR22215350 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718916 |
ILLUMINA |
13149985396 bp |
|
SRR22215351 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718917 |
ILLUMINA |
10024729638 bp |
|
SRR22215352 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718918 |
ILLUMINA |
9021867366 bp |
|
SRR22215353 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718919 |
ILLUMINA |
12969203062 bp |
|
SRR22215354 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718920 |
ILLUMINA |
11329130756 bp |
|
SRR22215355 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718921 |
ILLUMINA |
11208689834 bp |
|
SRR22215356 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718922 |
ILLUMINA |
12581239668 bp |
|
SRR22215357 |
RNA-Seq of Populus trichocarpa: SDX, GSM6718923 |
ILLUMINA |
12457564024 bp |
|
|
PRJNA814009 |
RNA-seq of LCM collected cambium, phloem, xylem cells |
- |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR18274413 |
RNA-Seq of Populus trichocarpa: 3 month plant with phloem from China: Harbin, Ph2 |
ILLUMINA |
8550085200 bp |
|
SRR18274417 |
RNA-Seq of Populus trichocarpa: 3 month plant with cambium from China: Harbin, Ca1 |
ILLUMINA |
8171374800 bp |
|
SRR18274409 |
RNA-Seq of Populus trichocarpa: 3 month plant with xylem from China: Harbin, Xy3 |
ILLUMINA |
4633794900 bp |
|
SRR18274410 |
RNA-Seq of Populus trichocarpa: 3 month plant with xylem from China: Harbin, Xy2 |
ILLUMINA |
7086966300 bp |
|
SRR18274411 |
RNA-Seq of Populus trichocarpa: 3 month plant with xylem from China: Harbin, Xy1 |
ILLUMINA |
5958092400 bp |
|
SRR18274412 |
RNA-Seq of Populus trichocarpa: 3 month plant with phloem from China: Harbin, Ph3 |
ILLUMINA |
9148799100 bp |
|
SRR18274414 |
RNA-Seq of Populus trichocarpa: 3 month plant with phloem from China: Harbin, Ph1 |
ILLUMINA |
6872610300 bp |
|
SRR18274415 |
RNA-Seq of Populus trichocarpa: 3 month plant with cambium from China: Harbin, Ca3 |
ILLUMINA |
7433856000 bp |
|
SRR18274416 |
RNA-Seq of Populus trichocarpa: 3 month plant with cambium from China: Harbin, Ca2 |
ILLUMINA |
6892814400 bp |
|
|
PRJNA997620 |
Populus trichocarpa raw sequence reads |
- |
 |
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR25393142 |
RNA-Seq of Populus: 1 year plant with root from China:Inner Mongolia, P. alba YX-6, B33 |
ILLUMINA |
6366644024 bp |
|
SRR25393143 |
RNA-Seq of Populus: 1 year plant with root from China:Inner Mongolia, P. alba YX-6, B32 |
ILLUMINA |
8385428104 bp |
|
SRR25393144 |
RNA-Seq of Populus: 1 year plant with root from China:Inner Mongolia, P. alba YX-6, B31 |
ILLUMINA |
8976942792 bp |
|
SRR25393148 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides 27-17, B13 |
ILLUMINA |
6189233540 bp |
|
SRR25393157 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides 27-17, B12 |
ILLUMINA |
8656605456 bp |
|
SRR25393158 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides 27-17, B11 |
ILLUMINA |
8199951476 bp |
|
SRR25393152 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng2, G13 |
ILLUMINA |
7781511290 bp |
|
SRR25393153 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng2, G12 |
ILLUMINA |
7002373326 bp |
|
SRR25393154 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng2, G11 |
ILLUMINA |
8118047400 bp |
|
SRR25393145 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng3, B23 |
ILLUMINA |
6455512328 bp |
|
SRR25393146 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng3, B22 |
ILLUMINA |
7536145320 bp |
|
SRR25393147 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng3, B21 |
ILLUMINA |
7912003166 bp |
|
SRR25393149 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng5, G23 |
ILLUMINA |
6265468450 bp |
|
SRR25393150 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng5, G22 |
ILLUMINA |
8929423312 bp |
|
SRR25393151 |
RNA-Seq of Populus: 1 year plant with root from China:Beijing, P. deltoides Zhongcheng5, G21 |
ILLUMINA |
6163542680 bp |
|
SRR25393141 |
RNA-Seq of Populus: 1 year plant with root from China:Xinjiang, P.bolleana, B41 |
ILLUMINA |
8990755758 bp |
|
SRR25393155 |
RNA-Seq of Populus: 1 year plant with root from China:Xinjiang, P.bolleana, B43 |
ILLUMINA |
6561741772 bp |
|
SRR25393156 |
RNA-Seq of Populus: 1 year plant with root from China:Xinjiang, P.bolleana, B42 |
ILLUMINA |
6596313468 bp |
|
|