Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA218216 Identification of microRNAs and transcript targets in Jatropha seeds -
3
Library Title Platform Total Base VCF File
SRR972445 RNA-Seq of Jatropha curcas: immature seeds, GSM1226038 ILLUMINA 1665318800 bp
SRR972446 RNA-Seq of Jatropha curcas: intermediate seeds, GSM1226039 ILLUMINA 4376211830 bp
SRR972447 RNA-Seq of Jatropha curcas: mature seeds, GSM1226040 ILLUMINA 3541280685 bp
PRJNA244896 Analysis of gene expression of Jatropha curcas under salt stress Zhang et al., 2014
24
Library Title Platform Total Base VCF File
SRR1251569 RNA-Seq of Jatropha curcas: plant under control 2 day treatment with root, C2dR-1 ILLUMINA 289416785 bp
SRR1251966 RNA-Seq of Jatropha curcas: plant under control 2 day treatment with root, C2dR-2 ILLUMINA 295518216 bp
SRR1251570 RNA-Seq of Jatropha curcas: plant under control 2 day treatment with leaf, C2dL-1 ILLUMINA 289326184 bp
SRR1251965 RNA-Seq of Jatropha curcas: plant under control 2 day treatment with leaf, C2dL-2 ILLUMINA 292135844 bp
SRR1251964 RNA-Seq of Jatropha curcas: plant under control 2 hour treatment with root, C2hR-2 ILLUMINA 289261945 bp
SRR1251567 RNA-Seq of Jatropha curcas: plant under control 2 hour treatment with root, C2hR-1 ILLUMINA 286269858 bp
SRR1251568 RNA-Seq of Jatropha curcas: plant under control 2 hour treatment with leaf, C2hL-1 ILLUMINA 298941699 bp
SRR1251963 RNA-Seq of Jatropha curcas: plant under control 2 hour treatment with leaf, C2hL-2 ILLUMINA 294606277 bp
SRR1251571 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with root, C7dR-1 ILLUMINA 300662775 bp
SRR1251968 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with root, C7dR-2 ILLUMINA 287730744 bp
SRR1251572 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with leaf, C7dL-1 ILLUMINA 297837729 bp
SRR1251967 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with leaf, C7dL-2 ILLUMINA 297349248 bp
SRR1251959 RNA-Seq of Jatropha curcas: plant under salt 2 day treatment with root, S2dR-1 ILLUMINA 300908804 bp
SRR1251972 RNA-Seq of Jatropha curcas: plant under salt 2 day treatment with root, S2dR-2 ILLUMINA 287473837 bp
SRR1251960 RNA-Seq of Jatropha curcas: plant under salt 2 day treatment with leaf, S2dL-1 ILLUMINA 291724195 bp
SRR1251971 RNA-Seq of Jatropha curcas: plant under salt 2 day treatment with leaf, S2dL-2 ILLUMINA 293165824 bp
SRR1251957 RNA-Seq of Jatropha curcas: plant under salt 2 hour treatment with root, S2hR-1 ILLUMINA 283663744 bp
SRR1251970 RNA-Seq of Jatropha curcas: plant under salt 2 hour treatment with root, S2hR-2 ILLUMINA 295945692 bp
SRR1251958 RNA-Seq of Jatropha curcas: plant under salt 2 hour treatment with leaf, S2hL-1 ILLUMINA 304326456 bp
SRR1251969 RNA-Seq of Jatropha curcas: plant under salt 2 hour treatment with leaf, S2hL-2 ILLUMINA 304427298 bp
SRR1251961 RNA-Seq of Jatropha curcas: plant under salt 7 day treatment with root, S7dR-1 ILLUMINA 305097324 bp
SRR1251974 RNA-Seq of Jatropha curcas: plant under salt 7 day treatment with root, S7dR-2 ILLUMINA 290245473 bp
SRR1251962 RNA-Seq of Jatropha curcas: plant under salt 7 day treatment with leaf, S7dL-1 ILLUMINA 290322354 bp
SRR1251973 RNA-Seq of Jatropha curcas: plant under salt 7 day treatment with leaf, S7dL-2 ILLUMINA 285234831 bp
PRJNA246450 Transcriptome profiling from roots of jatropha in response to waterlogging Juntawong et al., 2014
4
Library Title Platform Total Base VCF File
SRR1275402 RNA-Seq of Jatropha curcas: 30 day six-leaf-stage seedlings with whole roots, GSM1382421 ION_TORRENT 1511092882 bp
SRR1275403 RNA-Seq of Jatropha curcas: 30 day six-leaf-stage seedlings with whole roots, GSM1382422 ION_TORRENT 303151174 bp
SRR1275404 RNA-Seq of Jatropha curcas: 30 day six-leaf-stage seedlings with whole roots, GSM1382423 ION_TORRENT 1069400388 bp
SRR1275405 RNA-Seq of Jatropha curcas: 30 day six-leaf-stage seedlings with whole roots, GSM1382424 ION_TORRENT 950267259 bp
PRJNA254929 RNA sequencing of Jatropha curcas under Colletotrichum gloeosporioides infection -
4
Library Title Platform Total Base VCF File
SRR1560723 RNA-Seq of Jatropha curcas: leaf, D_ RJ127_CG induced ILLUMINA 7776392384 bp
SRR1560724 RNA-Seq of Jatropha curcas: leaf, B_9-1_Cg induced ILLUMINA 7567250674 bp
SRR1560722 RNA-Seq of Jatropha curcas: leaf, C_ RJ127_control ILLUMINA 10336214558 bp
SRR1539206 RNA-Seq of Jatropha curcas: leaf, A_9-1_control ILLUMINA 9146639992 bp
PRJNA257901 RNA-seq for drought stress response in Jatropha curcas L Zhang et al., 2015
24
Library Title Platform Total Base VCF File
SRR1542250 RNA-Seq of Jatropha curcas: plant under control 1 day treatment with root, C1dR-2 ILLUMINA 291718217 bp
SRR1542241 RNA-Seq of Jatropha curcas: plant under control 1 day treatment with leaf, C1dL-1 ILLUMINA 295238328 bp
SRR1542253 RNA-Seq of Jatropha curcas: plant under control 1 day treatment with leaf, C1dL-2 ILLUMINA 292563124 bp
SRR1542239 RNA-Seq of Jatropha curcas: plant under control 4 day treatment with root, C4dR-1 ILLUMINA 284158595 bp
SRR1542251 RNA-Seq of Jatropha curcas: plant under control 4 day treatment with root, C4dR-2 ILLUMINA 299050430 bp
SRR1542254 RNA-Seq of Jatropha curcas: plant under control 4 day treatment with leaf, C4dL-2 ILLUMINA 293920375 bp
SRR1542242 RNA-Seq of Jatropha curcas: plant under control 4 day treatment with leaf, C4dL-1 ILLUMINA 289326184 bp
SRR1542240 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with root, C7dR-11 ILLUMINA 300662775 bp
SRR1542252 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with root, C7dR-21 ILLUMINA 287730744 bp
SRR1542255 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with root, C7dR-21 ILLUMINA 297349248 bp
SRR1542243 RNA-Seq of Jatropha curcas: plant under control 7 day treatment with leaf, C7dL-11 ILLUMINA 297837729 bp
SRR1542244 RNA-Seq of Jatropha curcas: plant under drought 1 day treatment with root, D1dR-1 ILLUMINA 300515285 bp
SRR1542256 RNA-Seq of Jatropha curcas: plant under drought 1 day treatment with root, D1dR-2 ILLUMINA 294150626 bp
SRR1542247 RNA-Seq of Jatropha curcas: plant under drought 1 day treatment with leaf, D1dL-1 ILLUMINA 301462553 bp
SRR1542259 RNA-Seq of Jatropha curcas: plant under drought 1 day treatment with leaf, D1dL-2 ILLUMINA 291958072 bp
SRR1542245 RNA-Seq of Jatropha curcas: plant under drought 4 day treatment with root, D4dR-1 ILLUMINA 304940867 bp
SRR1542257 RNA-Seq of Jatropha curcas: plant under drought 4 day treatment with root, D4dR-2 ILLUMINA 282242744 bp
SRR1542248 RNA-Seq of Jatropha curcas: plant under drought 4 day treatment with leaf, D4dL-1 ILLUMINA 288286061 bp
SRR1542260 RNA-Seq of Jatropha curcas: plant under drought 4 day treatment with leaf, D4dL-2 ILLUMINA 295688736 bp
SRR1542246 RNA-Seq of Jatropha curcas: plant under drought 7 day treatment with root, D7dR-1 ILLUMINA 299293127 bp
SRR1542258 RNA-Seq of Jatropha curcas: plant under drought 7 day treatment with root, D7dR-2 ILLUMINA 285720225 bp
SRR1542249 RNA-Seq of Jatropha curcas: plant under drought 7 day treatment with leaf, D7dL-1 ILLUMINA 284087741 bp
SRR1542261 RNA-Seq of Jatropha curcas: plant under drought 7 day treatment with leaf, D7dL-2 ILLUMINA 285720225 bp
SRR1542235 RNA-Seq of Jatropha curcas: root, C1dR-1 ILLUMINA 298039756 bp
PRJNA262958 Transcriptome analysis of Jatropha curcas L.exposed to GA3 and BA -
9
Library Title Platform Total Base VCF File
SRR1596313 RNA-Seq of Jatropha curcas: 3 week old plant under BA-1 treatment with stem tissue, B1 ILLUMINA 578275117 bp
SRR1596314 RNA-Seq of Jatropha curcas: 3 week old plant under BA-2 treatment with stem tissue, B2 ILLUMINA 548684899 bp
SRR1596315 RNA-Seq of Jatropha curcas: 3 week old plant under BA-3 treatment with stem tissue, B3 ILLUMINA 592312294 bp
SRR1596310 RNA-Seq of Jatropha curcas: 3 week old plant under GA3-1 treatment with stem tissue, G1 ILLUMINA 568904700 bp
SRR1596311 RNA-Seq of Jatropha curcas: 3 week old plant under GA3-2 treatment with stem tissue, G2 ILLUMINA 610583855 bp
SRR1596312 RNA-Seq of Jatropha curcas: 3 week old plant under GA3-3 treatment with stem tissue, G3 ILLUMINA 581016226 bp
SRR1596308 RNA-Seq of Jatropha curcas: 3 week old plant under Mock-1 treatment with stem tissue, C1 ILLUMINA 549428180 bp
SRR1596307 RNA-Seq of Jatropha curcas: 3 week old plant under Mock-2 treatment with stem tissue, C2 ILLUMINA 565060013 bp
SRR1596309 RNA-Seq of Jatropha curcas: 3 week old plant under Mock-3 treatment with stem tissue, C3 ILLUMINA 563077767 bp
PRJNA350607 Jatropha curcas Transcriptome or Gene expression -
12
Library Title Platform Total Base VCF File
SRR4473565 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, CT3 ILLUMINA 6208601250 bp
SRR4473566 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, CT4 ILLUMINA 4907077250 bp
SRR4473567 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, CT5 ILLUMINA 6780285000 bp
SRR4473568 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, CT6 ILLUMINA 5348569250 bp
SRR4473569 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, T1 ILLUMINA 6481352750 bp
SRR4473570 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, T2 ILLUMINA 6089457000 bp
SRR4473571 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, CT1 ILLUMINA 6133237000 bp
SRR4473572 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, CT2 ILLUMINA 6174049250 bp
SRR4473573 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, T5 ILLUMINA 6698248250 bp
SRR4473574 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, T6 ILLUMINA 6406587750 bp
SRR4473575 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, T3 ILLUMINA 7756343250 bp
SRR4473576 RNA-Seq of Jatropha curcas: 2 years plant with flower inflorescence buds from China:Yunnan, T4 ILLUMINA 6625473750 bp
PRJNA382252 RNA-seq for Jatropha curcas L under 2 d and 16 d nitrogen deficiency -
16
Library Title Platform Total Base VCF File
SRR5431073 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with root, Root_of_biological_replicate_2_in_16_d_control_group ILLUMINA 301247296 bp
SRR5431074 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with root, Root_of_biological_replicate_1_in_16_d_control_group ILLUMINA 286533919 bp
SRR5431075 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with leaf, leaf_of_biological_replicate_2_in_16_d_control_group ILLUMINA 300869702 bp
SRR5431076 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with leaf, leaf_of_biological_replicate_1_in_16_d_control_group ILLUMINA 289589755 bp
SRR5431077 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with root, Root_of_biological_replicate_2_in_2_d_control_group ILLUMINA 295518216 bp
SRR5431078 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with root, Root_of_biological_replicate_1_in_2_d_control_group ILLUMINA 289416785 bp
SRR5431079 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with leaf, leaf_of_biological_replicate_2_in_2_d_control_group ILLUMINA 292135844 bp
SRR5431080 RNA-Seq of Jatropha curcas: 8 week seedling under Control treatment with leaf, leaf_of_biological_replicate_1_in_2_d_control_group ILLUMINA 289326184 bp
SRR5431065 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with root, Root_of_biological_replicate_2_in_16_d_N-deficient_treatment_group ILLUMINA 295796977 bp
SRR5431066 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with root, Root_of_biological_replicate_1_in_16_d_N-deficient_treatment_group ILLUMINA 298891033 bp
SRR5431067 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with leaf, leaf_of_biological_replicate_2_in_16_d_N-deficient_treatment_group ILLUMINA 296990176 bp
SRR5431068 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with leaf, leaf_of_biological_replicate_1_in_16_d_N-deficient_treatment_group ILLUMINA 288950354 bp
SRR5431069 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with root, Root_of_biological_replicate_2_in_2_d_N-deficient_treatment_group ILLUMINA 282823884 bp
SRR5431070 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with root, Root_of_biological_replicate_1_in_2_d_N-deficient_treatment_group ILLUMINA 296406047 bp
SRR5431071 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with leaf, leaf_of_biological_replicate_2_in_2_d_N-deficient_treatment_group ILLUMINA 290918684 bp
SRR5431072 RNA-Seq of Jatropha curcas: 8 week seedling under N defienciency treatment with leaf, leaf_of_biological_replicate_1_in_2_d_N-deficient_treatment_group ILLUMINA 305474624 bp
PRJNA397771 Transcriptome of Jatropha curcas L.with whole development process of pollen -
22
Library Title Platform Total Base VCF File
SRR5921364 RNA-Seq of Jatropha curcas: plant at mature pollen grain stage with male flower buds, GZ-QXN, 20 ILLUMINA 1762488000 bp
SRR5921365 RNA-Seq of Jatropha curcas: plant at forming meiotic tetrads stage with male flower buds, GZ-QXN, 19 ILLUMINA 3609142500 bp
SRR5921366 RNA-Seq of Jatropha curcas: plant at stamen growth stage with male flower buds, GZ-QXN, 12 ILLUMINA 4356453250 bp
SRR5921367 RNA-Seq of Jatropha curcas: plant at mature pollen grain stage with male flower buds, GZ-QXN, 20 ILLUMINA 3646309250 bp
SRR5921368 RNA-Seq of Jatropha curcas: plant at mature pollen grain stage with male flower buds, GZ-QXN, 20 ILLUMINA 3601747250 bp
SRR5921369 RNA-Seq of Jatropha curcas: plant at the formation of meiotic tetrads stage with male flower buds, GZ-QXN, 19 ILLUMINA 3392569500 bp
SRR5921370 RNA-Seq of Jatropha curcas: plant at the formation of meiotic tetrads stage with male flower buds, GZ-QXN, 19 ILLUMINA 3209452250 bp
SRR5921371 RNA-Seq of Jatropha curcas: plant at stamen growth stage with male flower buds, GZ-QXN, 12 ILLUMINA 4005615500 bp
SRR5921372 RNA-Seq of Jatropha curcas: plant at stamen growth stage with male flower buds, GZ-QXN, 12 ILLUMINA 1640823250 bp
SRR5921373 RNA-Seq of Jatropha curcas: plant at mature pollen grain stage with male flower buds, GZ-QXN, 20 ILLUMINA 3800656000 bp
SRR5921374 RNA-Seq of Jatropha curcas: plant at stamen growth stage with male flower buds, GZ-QXN, 12 ILLUMINA 3851938250 bp
SRR5921375 RNA-Seq of Jatropha curcas: plant at the formation of meiotic tetrads stage with male flower buds, GZ-QXN, 19 ILLUMINA 3891559250 bp
SRR5921376 RNA-Seq of Jatropha curcas: plant at the maturation of embryo sac stage with female flower buds, GZ-QXN, 10 ILLUMINA 3547769500 bp
SRR5921377 RNA-Seq of Jatropha curcas: plant at the formation of mononuclear embryo sac stage with female flower buds, GZ-QXN, 9 ILLUMINA 3471128000 bp
SRR5921378 RNA-Seq of Jatropha curcas: plant at the maturation of embryo sac stage with female flower buds, GZ-QXN, 10 ILLUMINA 3614516750 bp
SRR5921379 RNA-Seq of Jatropha curcas: plant at the formation of mononuclear embryo sac stage with female flower buds, GZ-QXN, 9 ILLUMINA 2975512000 bp
SRR5921380 RNA-Seq of Jatropha curcas: plant at carpel growth stage with female flower buds, GZ-QXN, 2 ILLUMINA 3380995500 bp
SRR5921381 RNA-Seq of Jatropha curcas: plant at the maturation of embryo sac stage with female flower buds, GZ-QXN, 10 ILLUMINA 3647922500 bp
SRR5921382 RNA-Seq of Jatropha curcas: plant at carpel growth stage with female flower buds, GZ-QXN, 2 ILLUMINA 3172512500 bp
SRR5921383 RNA-Seq of Jatropha curcas: plant at the maturation of embryo sac stage with female flower buds, GZ-QXN, 10 ILLUMINA 2954973500 bp
SRR5921384 RNA-Seq of Jatropha curcas: plant at the formation of mononuclear embryo sac stage with female flower buds, GZ-QXN, 9 ILLUMINA 3641577500 bp
SRR5921385 RNA-Seq of Jatropha curcas: plant at carpel growth stage with female flower buds, GZ-QXN, 2 ILLUMINA 3635127000 bp
PRJNA399175 Transcriptome analysis of the regulation mechanism of floral sex differentiation in Jatropha curcas L. Jin et al., 2022
5
Library Title Platform Total Base VCF File
SRR5952356 RNA-Seq of Jatropha curcas: inflorescence of 0.5 cm diameter from Nujiang city\, Yunnan province\, China, GSM2747884 ILLUMINA 7962846300 bp
SRR5952357 RNA-Seq of Jatropha curcas: male flower floral bud from Nujiang city\, Yunnan province\, China, GSM2747885 ILLUMINA 7381944600 bp
SRR5952358 RNA-Seq of Jatropha curcas: male flower floral bud from Nujiang city\, Yunnan province\, China, GSM2747886 ILLUMINA 8567250000 bp
SRR5952359 RNA-Seq of Jatropha curcas: female flower floral bud from Nujiang city\, Yunnan province\, China, GSM2747887 ILLUMINA 7084953600 bp
SRR5952360 RNA-Seq of Jatropha curcas: female flower floral bud from Nujiang city\, Yunnan province\, China, GSM2747888 ILLUMINA 7688042100 bp
PRJNA399212 Jatropha genome Raw sequence reads Cao et al., 2023
10
Library Title Platform Total Base VCF File
SRR5974841 RNA-Seq of Jatropha curcas: seed endosperm from immature fruit from Thailand, CN, J.curcas IF seed endosperm ILLUMINA 10335940444 bp
SRR5974843 RNA-Seq of Jatropha curcas: fully open male flower from Thailand, CN, J.curcas male flower ILLUMINA 14023975846 bp
SRR5974844 RNA-Seq of Jatropha curcas: fully open female flower from Thailand, CN, J.curcas female flower ILLUMINA 13121829100 bp
SRR5974846 RNA-Seq of Jatropha curcas: fully mature leaf from Thailand, CN, J.curcas CN leaf ILLUMINA 5502872284 bp
SRR5974855 RNA-Seq of Jatropha curcas: fully expanded root from Thailand, CN, J.curcas root ILLUMINA 4775981950 bp
SRR5974856 RNA-Seq of Jatropha curcas: fully mature stem from Thailand, CN, J.curcas stem ILLUMINA 4127602754 bp
SRR5974857 RNA-Seq of Jatropha curcas: seed endosperm from yellow fruit from Thailand, CN, J.curcas YF seed endosperm ILLUMINA 14267491694 bp
SRR5974858 RNA-Seq of Jatropha curcas: seed endosperm from brown fruit from Thailand, CN, J.curcas BF seed endosperm ILLUMINA 16169049196 bp
SRR5974842 RNA-Seq of Jatropha curcas: seed endosperm from green fruit from Thailand, CN, J.curcas GF seed endosperm ILLUMINA 14202982186 bp
SRR5974853 RNA-Seq of Jatropha curcas: fully mature leaf from Thailand, M10, J.curcas M10 leaf ILLUMINA 4080294758 bp
PRJNA401963 Transcriptome or gene expression of Jatropha curcas leaf -
1
Library Title Platform Total Base VCF File
SRR6080006 RNA-Seq of Jatropha curcas: leaf from India: Gujarat\, Rajkot, Jatropha curcas leaf small RNA ILLUMINA 1183737225 bp
PRJNA415534 Transcriptome or Gene expression of Jatropha curcas Chen et al., 2020
12
Library Title Platform Total Base VCF File
SRR6227301 RNA-Seq of Jatropha curcas: 3-4 days flower inflorescence buds from China:Yunnan, dxh mutant, D5 ILLUMINA 5808591500 bp
SRR6227302 RNA-Seq of Jatropha curcas: 3-4 days flower inflorescence buds from China:Yunnan, dxh mutant, D6 ILLUMINA 5929490000 bp
SRR6227303 RNA-Seq of Jatropha curcas: shoot tip from China:Yunnan, dxh mutant, D1 ILLUMINA 5444494750 bp
SRR6227304 RNA-Seq of Jatropha curcas: shoot tip from China:Yunnan, dxh mutant, D2 ILLUMINA 6102343000 bp
SRR6227311 RNA-Seq of Jatropha curcas: shoot tip from China:Yunnan, dxh mutant, D3 ILLUMINA 5168709750 bp
SRR6227312 RNA-Seq of Jatropha curcas: 3-4 days flower inflorescence buds from China:Yunnan, dxh mutant, D4 ILLUMINA 6328852500 bp
SRR6227305 RNA-Seq of Jatropha curcas: 3-4 days flower inflorescence buds from China:Yunnan, wildtype, CK5 ILLUMINA 6030266250 bp
SRR6227306 RNA-Seq of Jatropha curcas: 3-4 days flower inflorescence buds from China:Yunnan, wildtype, CK6 ILLUMINA 6536199500 bp
SRR6227307 RNA-Seq of Jatropha curcas: shoot tip from China:Yunnan, wildtype, CK3 ILLUMINA 7140460250 bp
SRR6227308 RNA-Seq of Jatropha curcas: 3-4 days flower inflorescence buds from China:Yunnan, wildtype, CK4 ILLUMINA 5684835500 bp
SRR6227309 RNA-Seq of Jatropha curcas: shoot tip from China:Yunnan, wildtype, CK1 ILLUMINA 6813612500 bp
SRR6227310 RNA-Seq of Jatropha curcas: shoot tip from China:Yunnan, wildtype, CK2 ILLUMINA 6506257750 bp
PRJNA415556 Raw sequence reads of Jatropha curcas Puvvala et al., 2019
2
Library Title Platform Total Base VCF File
SRR6287184 RNA-Seq of Jatropha curcas: 14 day hypocotyl from India: Hyderabad, JP-2, Jatropha-cultured ILLUMINA 5205885200 bp
SRR6287185 RNA-Seq of Jatropha curcas: 0 day hypocotyl from India: Hyderabad, JP-2, Jatropha-control ILLUMINA 4366310200 bp
PRJNA420601 Transcriptional responses analysis of Jatropha curcas following gibberellin treatment -
10
Library Title Platform Total Base VCF File
SRR6335586 RNA-Seq of Jatropha curcas: 0-h after GA3 treatment with inflorescence meristem, GSM2871505 ILLUMINA 6996247500 bp
SRR6335587 RNA-Seq of Jatropha curcas: 0-h after GA3 treatment with inflorescence meristem, GSM2871506 ILLUMINA 7588193700 bp
SRR6335588 RNA-Seq of Jatropha curcas: 6-h after GA3 treatment with inflorescence meristem, GSM2871507 ILLUMINA 6522253800 bp
SRR6335589 RNA-Seq of Jatropha curcas: 6-h after GA3 treatment with inflorescence meristem, GSM2871508 ILLUMINA 6789558300 bp
SRR6335590 RNA-Seq of Jatropha curcas: 12-h after GA3 treatment with inflorescence meristem, GSM2871509 ILLUMINA 8316898800 bp
SRR6335591 RNA-Seq of Jatropha curcas: 12-h after GA3 treatment with inflorescence meristem, GSM2871510 ILLUMINA 7086543600 bp
SRR6335592 RNA-Seq of Jatropha curcas: 24-h after GA3 treatment with inflorescence meristem, GSM2871511 ILLUMINA 7514635200 bp
SRR6335593 RNA-Seq of Jatropha curcas: 24-h after GA3 treatment with inflorescence meristem, GSM2871512 ILLUMINA 9627010200 bp
SRR6335594 RNA-Seq of Jatropha curcas: 48-h after GA3 treatment with inflorescence meristem, GSM2871513 ILLUMINA 7138628400 bp
SRR6335595 RNA-Seq of Jatropha curcas: 48-h after GA3 treatment with inflorescence meristem, GSM2871514 ILLUMINA 6553750500 bp
PRJNA429992 Transcriptome analysis of Jatropha curcas L. flower buds responded to the paclobutrazol treatment -
3
Library Title Platform Total Base VCF File
SRR6473049 RNA-Seq of Jatropha curcas: reproductive stage plant under 0 hour aftre paclobutrazol treatment with flower buds from Thailand: Mae Lao district\, Chiang Rai province, JPoph022018 ILLUMINA 5737025230 bp
SRR6473067 RNA-Seq of Jatropha curcas: reproductive stage plant under 24 hour aftre paclobutrazol treatment with flower buds from Thailand: Mae Lao district\, Chiang Rai province, JPoph2422018 ILLUMINA 6657670126 bp
SRR6473050 RNA-Seq of Jatropha curcas: reproductive stage plant under 4 hour aftre paclobutrazol treatment with flower buds from Thailand: Mae Lao district\, Chiang Rai province, JPoph422018 ILLUMINA 6204016506 bp
PRJNA561906 Jatropha curcas Transcriptome or Gene expression -
2
Library Title Platform Total Base VCF File
SRR10083543 RNA-Seq of Jatropha curcas: growing stage plant with plant tissue from India:Assam, RT-PYR ILLUMINA 4544477434 bp
SRR10083544 RNA-Seq of Jatropha curcas: growing stage plant with Plant tissue from India:Assam, RT-DBC ILLUMINA 4887938109 bp
PRJNA564155 Transcriptional responses analysis of Jatropha curcas between BRC2 mutants and wild plants Chen et al., 2020
18
Library Title Platform Total Base VCF File
SRR10076310 RNA-Seq of Jatropha curcas: seedling under biological treatment with leaves from China: Yunnan, CL1 ILLUMINA 6547411500 bp
SRR10076311 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, CAB3 ILLUMINA 8870453700 bp
SRR10076312 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, CAB2 ILLUMINA 6386266500 bp
SRR10076313 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, CAB1 ILLUMINA 7682708100 bp
SRR10076317 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, MB3 ILLUMINA 6696192000 bp
SRR10076318 RNA-Seq of Jatropha curcas: seedling under biological treatment with leaves from China: Yunnan, s-5L3 ILLUMINA 9654954300 bp
SRR10076319 RNA-Seq of Jatropha curcas: seedling under biological treatment with leaves from China: Yunnan, s-5L2 ILLUMINA 9337688700 bp
SRR10076320 RNA-Seq of Jatropha curcas: seedling under biological treatment with leaves from China: Yunnan, s-5L1 ILLUMINA 7582431000 bp
SRR10076321 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, s-5AB3 ILLUMINA 7262720700 bp
SRR10076322 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, s-5AB2 ILLUMINA 6945473700 bp
SRR10076323 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, s-5AB1 ILLUMINA 7601212500 bp
SRR10076324 RNA-Seq of Jatropha curcas: seedling under biological treatment with leaves from China: Yunnan, CL3 ILLUMINA 6629063100 bp
SRR10076325 RNA-Seq of Jatropha curcas: seedling under biological treatment with leaves from China: Yunnan, CL2 ILLUMINA 5775943200 bp
SRR10076326 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, MB2 ILLUMINA 8035097700 bp
SRR10076327 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, MB1 ILLUMINA 8040318600 bp
SRR10076314 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, WB3 ILLUMINA 10473525900 bp
SRR10076315 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, WB2 ILLUMINA 10066100400 bp
SRR10076316 RNA-Seq of Jatropha curcas: seedling under biological treatment with axillary buds from China: Yunnan, WB1 ILLUMINA 9158942700 bp
PRJNA564207 Transcriptome of transgenic Jatropha Zhao et al., 2022
11
Library Title Platform Total Base VCF File
SRR10122044 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, JcSEP3 overexpressing, sep3if3 ILLUMINA 7752187200 bp
SRR10122046 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, JcSEP3 overexpressing, sep3if2 ILLUMINA 7285250100 bp
SRR10122047 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, JcSEP3 overexpressing, sep3if1 ILLUMINA 7099922100 bp
SRR10122038 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, JcSEP3 RNAi, SEP3iIF15 ILLUMINA 6331884600 bp
SRR10122039 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, JcSEP3 RNAi, SEP3iIF2 ILLUMINA 6398516400 bp
SRR10122040 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, JcSEP3 RNAi, SEP3iIF1 ILLUMINA 6371284200 bp
SRR10122041 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, wild type, sckif3 ILLUMINA 7260225300 bp
SRR10122042 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, wild type, sckif2 ILLUMINA 7410804600 bp
SRR10122043 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, wild type, sckif1 ILLUMINA 7343865600 bp
SRR10122037 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, wild type I, WTIF2 ILLUMINA 6432949500 bp
SRR10122045 RNA-Seq of Jatropha curcas: two years old plants under biological treatment with inflorescence buds from China: Yunnan, wild type I, WTIF3 ILLUMINA 5946224100 bp
PRJNA737278 RNAseq of Jatropha curcas -
24
Library Title Platform Total Base VCF File
SRR14807417 RNA-Seq of Jatropha curcas: a male flower that has not opened from China:Guizhou\,Ceheng, 10JCn_m1 ILLUMINA 9520316700 bp
SRR14807418 RNA-Seq of Jatropha curcas: a female flower that has not yet opened from China:Guizhou\,Ceheng, 9JCn_f3 ILLUMINA 9587599200 bp
SRR14807419 RNA-Seq of Jatropha curcas: a female flower that has not yet opened from China:Guizhou\,Ceheng, 8JCn_f2 ILLUMINA 8132901900 bp
SRR14807420 RNA-Seq of Jatropha curcas: a female flower that has not yet opened from China:Guizhou\,Ceheng, 7JCn_f1 ILLUMINA 8216754900 bp
SRR14807421 RNA-Seq of Jatropha curcas: a terminal vegetative shoot at the sexual differentiation stage from China:Guizhou\,Ceheng, 6JCn_p3 ILLUMINA 9563416800 bp
SRR14807422 RNA-Seq of Jatropha curcas: a terminal vegetative shoot at the sexual differentiation stage from China:Guizhou\,Ceheng, 5JCn_p2 ILLUMINA 8847631500 bp
SRR14807423 RNA-Seq of Jatropha curcas: a terminal vegetative shoot at the sexual differentiation stage from China:Guizhou\,Ceheng, 4JCn_p1 ILLUMINA 8163475200 bp
SRR14807424 RNA-Seq of Jatropha curcas: a male flower that has not opened from China:Guizhou\,Ceheng, 24JCw_m3 ILLUMINA 9242133900 bp
SRR14807425 RNA-Seq of Jatropha curcas: a male flower that has not opened from China:Guizhou\,Ceheng, 23JCw_m2 ILLUMINA 8585961000 bp
SRR14807426 RNA-Seq of Jatropha curcas: a male flower that has not opened from China:Guizhou\,Ceheng, 22JCw_m1 ILLUMINA 9600683100 bp
SRR14807427 RNA-Seq of Jatropha curcas: a female flower that has not yet opened from China:Guizhou\,Ceheng, 21JCw_f3 ILLUMINA 10145539500 bp
SRR14807428 RNA-Seq of Jatropha curcas: a slightly red new shoot bud at a branch tip from China:Guizhou\,Ceheng, 3JCn_l3 ILLUMINA 8390927700 bp
SRR14807429 RNA-Seq of Jatropha curcas: a female flower that has not yet opened from China:Guizhou\,Ceheng, 20JCw_f2 ILLUMINA 8015074500 bp
SRR14807430 RNA-Seq of Jatropha curcas: a female flower that has not yet opened from China:Guizhou\,Ceheng, 19JCw_f1 ILLUMINA 9821497800 bp
SRR14807431 RNA-Seq of Jatropha curcas: a terminal vegetative shoot at the sexual differentiation stage from China:Guizhou\,Ceheng, 18JCw_p3 ILLUMINA 9274612800 bp
SRR14807432 RNA-Seq of Jatropha curcas: a terminal vegetative shoot at the sexual differentiation stage from China:Guizhou\,Ceheng, 17JCw_p2 ILLUMINA 10594157400 bp
SRR14807433 RNA-Seq of Jatropha curcas: a terminal vegetative shoot at the sexual differentiation stage from China:Guizhou\,Ceheng, 16JCw_p1 ILLUMINA 9508388100 bp
SRR14807434 RNA-Seq of Jatropha curcas: a slightly red new shoot bud at a branch tip from China:Guizhou\,Ceheng, 15JCw_l3 ILLUMINA 8398273800 bp
SRR14807435 RNA-Seq of Jatropha curcas: a slightly red new shoot bud at a branch tip from China:Guizhou\,Ceheng, 14JCw_l2 ILLUMINA 8807865000 bp
SRR14807436 RNA-Seq of Jatropha curcas: a slightly red new shoot bud at a branch tip from China:Guizhou\,Ceheng, 13JCw_l1 ILLUMINA 10177377900 bp
SRR14807437 RNA-Seq of Jatropha curcas: a male flower that has not opened from China:Guizhou\,Ceheng, 12JCn_m3 ILLUMINA 9492405000 bp
SRR14807438 RNA-Seq of Jatropha curcas: a male flower that has not opened from China:Guizhou\,Ceheng, 11JCn_m2 ILLUMINA 9610469700 bp
SRR14807439 RNA-Seq of Jatropha curcas: a slightly red new shoot bud at a branch tip from China:Guizhou\,Ceheng, 2JCn_l2 ILLUMINA 9842262000 bp
SRR14807440 RNA-Seq of Jatropha curcas: a slightly red new shoot bud at a branch tip from China:Guizhou\,Ceheng, 1JCn_l1 ILLUMINA 9319065000 bp
PRJNA850463 De novo transcriptome data of Jatropha curcas -
2
Library Title Platform Total Base VCF File
SRR19745945 RNA-Seq of Jatropha curcas: plant under bauxite treatment with leave from Malaysia:Glasshouse and Nursery Complex\, Kulliyyah of Science\, International Islamic University Malaysia, Treatment_Bauxite DNBSEQ 6618629800 bp
SRR19745944 RNA-Seq of Jatropha curcas: plant under without bauxite treatment with leave from Malaysia:Glasshouse and Nursery Complex\, Kulliyyah of Science\, International Islamic University Malaysia, Control_Without_Bauxite DNBSEQ 6695882400 bp

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