Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA1051648 Transcriptome sequencing in salt response of Kandelia obovata Liu et al., 2024
915
Library Title Platform Total Base VCF File
SRR27189923 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (9h) with root from China: Wenzhou, WL_9h_3 ILLUMINA 6938987258 bp
SRR27189924 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (9h) with root from China: Wenzhou, WL_9h_2 ILLUMINA 6778920312 bp
SRR27189925 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (9h) with root from China: Wenzhou, WL_9h_1 ILLUMINA 6761143384 bp
SRR27189926 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (6h) with root from China: Wenzhou, WL_6h_3 ILLUMINA 6458041688 bp
SRR27189927 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (6h) with root from China: Wenzhou, WL_6h_2 ILLUMINA 7685713968 bp
SRR27189928 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (6h) with root from China: Wenzhou, WL_6h_1 ILLUMINA 6872480516 bp
SRR27189929 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (3h) with root from China: Wenzhou, WL_3h_3 ILLUMINA 6513581300 bp
SRR27189930 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (3h) with root from China: Wenzhou, WL_3h_2 ILLUMINA 7759536056 bp
SRR27189931 RNA-Seq of Kandelia obovata: 6 months plants under waterlogging stress (3h) with root from China: Wenzhou, WL_3h_1 ILLUMINA 7002586646 bp
PRJNA1051781 Transcriptome sequencing in waterlogging response of Kandelia obovata Liu et al., 2024
916
Library Title Platform Total Base VCF File
SRR27194180 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (30‰) with root from China: Wenzhou, NaCl_30_1 ILLUMINA 6460697476 bp
SRR27194181 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (20‰) with root from China: Wenzhou, NaCl_20_3 ILLUMINA 6710570766 bp
SRR27194182 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (20‰) with root from China: Wenzhou, NaCl_20_2 ILLUMINA 6658729748 bp
SRR27194183 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (20‰) with root from China: Wenzhou, NaCl_20_1 ILLUMINA 6639055656 bp
SRR27194184 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (10‰) with root from China: Wenzhou, NaCl_10_3 ILLUMINA 7411870032 bp
SRR27194185 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (10‰) with root from China: Wenzhou, NaCl_10_2 ILLUMINA 6415827826 bp
SRR27194186 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (10‰) with root from China: Wenzhou, NaCl_10_1 ILLUMINA 6963127628 bp
SRR27194187 RNA-Seq of Kandelia obovata: 6 months plants under no stress (control) with root from China: Wenzhou, Control_3 ILLUMINA 6410804056 bp
SRR27194188 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (30‰) with root from China: Wenzhou, NaCl_30_3 ILLUMINA 6705450054 bp
SRR27194189 RNA-Seq of Kandelia obovata: 6 months plants under salt stress (30‰) with root from China: Wenzhou, NaCl_30_2 ILLUMINA 6780488296 bp
SRR27194190 RNA-Seq of Kandelia obovata: 6 months plants under no stress (control) with root from China: Wenzhou, Control_2 ILLUMINA 6994829172 bp
SRR27194191 RNA-Seq of Kandelia obovata: 6 months plants under no stress (control) with root from China: Wenzhou, Control_1 ILLUMINA 6710033508 bp
PRJNA353062 The transcriptomes of several mangrove and terrestrial plants in Rhizophoraceae were de novo assembled and compared, to provide insights on adaptation to the extreme intertidal environments. Guo et al., 2017
917
Library Title Platform Total Base VCF File
SRR5019675 RNA-Seq of Kandelia obovata: young seedlingplant with leaves and roots from China: Hainan, Kob_leaf_root ILLUMINA 2330839620 bp
PRJNA386602 Raw sequence reads of Kandelia obovata under ABA treatment -
918
Library Title Platform Total Base VCF File
SRR5601305 RNA-Seq of Kandelia obovata: embryo from China:Xiamen, ABA1 ILLUMINA 3732250536 bp
SRR5601306 RNA-Seq of Kandelia obovata: embryo from China:Xiamen, ABA2 ILLUMINA 4797495360 bp
SRR5601307 RNA-Seq of Kandelia obovata: embryo from China:Xiamen, ABA3 ILLUMINA 4390978788 bp
SRR5601308 RNA-Seq of Kandelia obovata: embryo from China:Xiamen, CK1 ILLUMINA 4945709664 bp
SRR5601309 RNA-Seq of Kandelia obovata: embryo from China:Xiamen, CK2 ILLUMINA 3612309372 bp
SRR5601310 RNA-Seq of Kandelia obovata: embryo from China:Xiamen, CK3 ILLUMINA 3202398360 bp
PRJNA416402 Raw sequence reads in winter cold extremes response of Kandelia obovata Sun et al., 2022
919
Library Title Platform Total Base VCF File
SRR6251193 RNA-Seq of Kandelia obovata: leaf from China: Yunxiao\, Fujian Province, leaf1 ILLUMINA 2229957992 bp
SRR6251400 RNA-Seq of Kandelia obovata: stem from China: Yunxiao\, Fujian Province, stem1 ILLUMINA 5696765088 bp
SRR6251245 RNA-Seq of Kandelia obovata: leaf from China: Yunxiao\, Fujian Province, leaf2 ILLUMINA 1470731902 bp
SRR6251267 RNA-Seq of Kandelia obovata: leaf from China: Yunxiao\, Fujian Province, leaf3 ILLUMINA 2617714970 bp
SRR6255795 RNA-Seq of Kandelia obovata: stem from China: Yunxiao\, Fujian Province, stem2 ILLUMINA 2843366454 bp
SRR6255802 RNA-Seq of Kandelia obovata: stem from China: Yunxiao\, Fujian Province, stem3 ILLUMINA 2788818834 bp
SRR6255803 RNA-Seq of Kandelia obovata: flower from China: Yunxiao\, Fujian Province, flower1 ILLUMINA 1909442976 bp
SRR6255804 RNA-Seq of Kandelia obovata: flower from China: Yunxiao\, Fujian Province, flower2 ILLUMINA 4247926478 bp
SRR6255805 RNA-Seq of Kandelia obovata: flower from China: Yunxiao\, Fujian Province, flower3 ILLUMINA 1608966562 bp
SRR6255812 RNA-Seq of Kandelia obovata: pistil from China: Yunxiao\, Fujian Province, pistil1 ILLUMINA 3118982900 bp
SRR6255813 RNA-Seq of Kandelia obovata: pistil from China: Yunxiao\, Fujian Province, pistil2 ILLUMINA 5154368120 bp
SRR6255814 RNA-Seq of Kandelia obovata: pistil from China: Yunxiao\, Fujian Province, pistil3 ILLUMINA 6803675560 bp
SRR6255815 RNA-Seq of Kandelia obovata: stamen from China: Yunxiao\, Fujian Province, stamen1 ILLUMINA 2119546635 bp
SRR6255818 RNA-Seq of Kandelia obovata: stamen from China: Yunxiao\, Fujian Province, stamen2 ILLUMINA 2389724845 bp
SRR6255819 RNA-Seq of Kandelia obovata: stamen from China: Yunxiao\, Fujian Province, stamen3 ILLUMINA 1978258780 bp
SRR6255821 RNA-Seq of Kandelia obovata: sepal from China: Yunxiao\, Fujian Province, sepal1 ILLUMINA 1434978844 bp
SRR6255823 RNA-Seq of Kandelia obovata: sepal from China: Yunxiao\, Fujian Province, sepal2 ILLUMINA 1481222480 bp
SRR6255824 RNA-Seq of Kandelia obovata: sepal from China: Yunxiao\, Fujian Province, sepal3 ILLUMINA 1488279712 bp
SRR6255826 RNA-Seq of Kandelia obovata: fruit from China: Yunxiao\, Fujian Province, fruit1 ILLUMINA 2772561095 bp
SRR6255827 RNA-Seq of Kandelia obovata: fruit from China: Yunxiao\, Fujian Province, fruit2 ILLUMINA 2436844480 bp
SRR6255828 RNA-Seq of Kandelia obovata: fruit from China: Yunxiao\, Fujian Province, fruit3 ILLUMINA 1415353990 bp
SRR6255829 RNA-Seq of Kandelia obovata: root from China: Yunxiao\, Fujian Province, root1 ILLUMINA 1586811822 bp
SRR6255830 RNA-Seq of Kandelia obovata: root from China: Yunxiao\, Fujian Province, root2 ILLUMINA 2130349962 bp
SRR6255831 RNA-Seq of Kandelia obovata: root from China: Yunxiao\, Fujian Province, root3 ILLUMINA 1499070984 bp
SRR6255843 RNA-Seq of Kandelia obovata: leaf from China: Yueqing\, Zhejiang Province, CT1 ILLUMINA 7351045884 bp
SRR6255845 RNA-Seq of Kandelia obovata: leaf from China: Yueqing\, Zhejiang Province, CT2 ILLUMINA 6485404968 bp
SRR6255846 RNA-Seq of Kandelia obovata: leaf from China: Yueqing\, Zhejiang Province, CT3 ILLUMINA 5677075656 bp
SRR6255847 RNA-Seq of Kandelia obovata: leaf from China: Yueqing\, Zhejiang Province, NCT1 ILLUMINA 6660451224 bp
SRR6255848 RNA-Seq of Kandelia obovata: leaf from China: Yueqing\, Zhejiang Province, NCT2 ILLUMINA 6716367756 bp
SRR6255849 RNA-Seq of Kandelia obovata: leaf from China: Yueqing\, Zhejiang Province, NCT3 ILLUMINA 7517267604 bp
PRJNA630823 Transcriptome analysis of vivipary germination in Kandelia obovata -
920
Library Title Platform Total Base VCF File
SRR11788329 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with stage2 embryo from China: Fujian, S2embryo-1 ILLUMINA 4546816596 bp
SRR11788330 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with stage2 seed coat from China: Fujian, S2seed coat-3 ILLUMINA 5423792976 bp
SRR11788331 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with stage2 seed coat from China: Fujian, S2seed coat-2 ILLUMINA 5545577016 bp
SRR11788332 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with stage2 seed coat from China: Fujian, S2seed coat-1 ILLUMINA 4544721468 bp
SRR11788333 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with seed from China: Fujian, S2seed-3 ILLUMINA 3077359740 bp
SRR11788334 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with seed from China: Fujian, S2seed-2 ILLUMINA 3520658484 bp
SRR11788335 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with seed from China: Fujian, S2seed-1 ILLUMINA 2570189580 bp
SRR11788336 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 axis from China: Fujian, S4axis-3 ILLUMINA 4722063192 bp
SRR11788337 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 axis from China: Fujian, S4axis-2 ILLUMINA 5428560564 bp
SRR11788338 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 axis from China: Fujian, S4axis-1 ILLUMINA 6800645880 bp
SRR11788339 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 cotyledon from China: Fujian, S4cotyledon-3 ILLUMINA 5328601740 bp
SRR11788340 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 cotyledon from China: Fujian, S4cotyledon-2 ILLUMINA 5648864760 bp
SRR11788341 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 cotyledon from China: Fujian, S4cotyledon-1 ILLUMINA 5159940156 bp
SRR11788342 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 seed coat from China: Fujian, S4seed coat-3 ILLUMINA 4760259084 bp
SRR11788343 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 seed coat from China: Fujian, S4seed coat-2 ILLUMINA 4663861524 bp
SRR11788344 RNA-Seq of Kandelia obovata: embryo germinate out of seed coat with stage4 seed coat from China: Fujian, S4seed coat-1 ILLUMINA 5287563540 bp
SRR11788345 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 axis from China: Fujian, S3axis-3 ILLUMINA 7097468364 bp
SRR11788346 RNA-Seq of Kandelia obovata: unfertilized stage flowering plant with ovule from China: Fujian, S1ovule-3 ILLUMINA 2999833704 bp
SRR11788347 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 axis from China: Fujian, S3axis-2 ILLUMINA 8073001188 bp
SRR11788348 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 axis from China: Fujian, S3axis-1 ILLUMINA 5925239208 bp
SRR11788349 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 cotyledon from China: Fujian, S3cotyledon-3 ILLUMINA 5552772624 bp
SRR11788350 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 cotyledon from China: Fujian, S3cotyledon-2 ILLUMINA 6505949016 bp
SRR11788351 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 cotyledon from China: Fujian, S3cotyledon-1 ILLUMINA 6532792560 bp
SRR11788352 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 seed coat from China: Fujian, S3seed coat-3 ILLUMINA 6305236080 bp
SRR11788353 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 seed coat from China: Fujian, S3seed coat-2 ILLUMINA 6016513140 bp
SRR11788354 RNA-Seq of Kandelia obovata: embryo enclosed in seed coat with stage3 seed coat from China: Fujian, S3seed coat-1 ILLUMINA 6210574920 bp
SRR11788355 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with stage2 embryo from China: Fujian, S2embryo-3 ILLUMINA 4409594028 bp
SRR11788356 RNA-Seq of Kandelia obovata: seeds fertilized for 2 weeks or so with stage2 embryo from China: Fujian, S2embryo-2 ILLUMINA 7415128728 bp
SRR11788357 RNA-Seq of Kandelia obovata: unfertilized stage flowering plant with ovule from China: Fujian, S1ovule-2 ILLUMINA 5251969044 bp
SRR11788358 RNA-Seq of Kandelia obovata: unfertilized stage flowering plant with ovule from China: Fujian, S1ovule-1 ILLUMINA 4878192564 bp
PRJNA631086 Kandelia obovata Genome sequencing and assembly Qiao et al., 2020
921
Library Title Platform Total Base VCF File
SRR12158670 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 11830224226 bp
SRR12158671 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 12225341833 bp
SRR12158672 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 4340766065 bp
SRR12158673 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 4156282216 bp
SRR12158674 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 4213244136 bp
SRR12158675 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 6313066800 bp
SRR12158676 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 7740516600 bp
SRR12158677 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 5710415351 bp
SRR12158678 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 7659638700 bp
SRR12158679 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 8121541800 bp
SRR12158680 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 2072476338 bp
SRR12158681 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 7884745500 bp
SRR12158682 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 8391215400 bp
SRR12158683 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 7279845300 bp
SRR12158684 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 1444852152 bp
SRR12158685 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 2786342582 bp
SRR12158686 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 3044754372 bp
SRR12158687 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 3442339954 bp
SRR12158688 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 7419532500 bp
SRR12158689 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 8298859612 bp
SRR12158690 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 7936632193 bp
SRR12158691 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 8510061693 bp
SRR12158692 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 12109364873 bp
SRR12158693 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 1439893248 bp
SRR12158694 RNA-Seq of Kandelia obovata: 3 years old plant with root from China:Fujian, Kandelia obovata, RNA ILLUMINA 8522912400 bp
PRJNA678025 Cold acclimation in Kandelia obovata seedlings Du et al., 2022
922
Library Title Platform Total Base VCF File
SRR13052572 RNA-Seq of Kandelia obovata: 1 year old seedling under second time cold treatment with leave from China: Fujian, COLD-2_1 ILLUMINA 7765499100 bp
SRR13052573 RNA-Seq of Kandelia obovata: 1 year old seedling under recovery treatment after first time cold treatment with leave from China: Fujian, REC-1_3 ILLUMINA 9733766400 bp
SRR13052574 RNA-Seq of Kandelia obovata: 1 year old seedling under recovery treatment after first time cold treatment with leave from China: Fujian, REC-1_2 ILLUMINA 9179280600 bp
SRR13052575 RNA-Seq of Kandelia obovata: 1 year old seedling under recovery treatment after first time cold treatment with leave from China: Fujian, REC-1_1 ILLUMINA 8071912800 bp
SRR13052576 RNA-Seq of Kandelia obovata: 1 year old seedling under first time cold treatment with leave from China: Fujian, COLD-1_3 ILLUMINA 7685729100 bp
SRR13052577 RNA-Seq of Kandelia obovata: 1 year old seedling under first time cold treatment with leave from China: Fujian, COLD-1_2 ILLUMINA 6611901600 bp
SRR13052578 RNA-Seq of Kandelia obovata: 1 year old seedling under first time cold treatment with leave from China: Fujian, COLD-1_1 ILLUMINA 8653866000 bp
SRR13052579 RNA-Seq of Kandelia obovata: 1 year old seedling under untreated with leave from China: Fujian, CTR_3 ILLUMINA 8497143300 bp
SRR13052580 RNA-Seq of Kandelia obovata: 1 year old seedling under fourth time cold treatmnt with leave from China: Fujian, COLD-4_3 ILLUMINA 7857737100 bp
SRR13052581 RNA-Seq of Kandelia obovata: 1 year old seedling under fourth time cold treatmnt with leave from China: Fujian, COLD-4_2 ILLUMINA 8051789700 bp
SRR13052582 RNA-Seq of Kandelia obovata: 1 year old seedling under fourth time cold treatmnt with leave from China: Fujian, COLD-4_1 ILLUMINA 10219815600 bp
SRR13052583 RNA-Seq of Kandelia obovata: 1 year old seedling under recovery treatment after second time cold treatment with leave from China: Fujian, REC-2_3 ILLUMINA 6852846600 bp
SRR13052584 RNA-Seq of Kandelia obovata: 1 year old seedling under recovery treatment after second time cold treatment with leave from China: Fujian, REC-2_2 ILLUMINA 8398409700 bp
SRR13052585 RNA-Seq of Kandelia obovata: 1 year old seedling under recovery treatment after second time cold treatment with leave from China: Fujian, REC-2_1 ILLUMINA 7078209300 bp
SRR13052586 RNA-Seq of Kandelia obovata: 1 year old seedling under second time cold treatment with leave from China: Fujian, COLD-2_3 ILLUMINA 8415195900 bp
SRR13052587 RNA-Seq of Kandelia obovata: 1 year old seedling under second time cold treatment with leave from China: Fujian, COLD-2_2 ILLUMINA 8601729000 bp
SRR13052588 RNA-Seq of Kandelia obovata: 1 year old seedling under untreated with leave from China: Fujian, CTR_2 ILLUMINA 9049449600 bp
SRR13052589 RNA-Seq of Kandelia obovata: 1 year old seedling under untreated with leave from China: Fujian, CTR_1 ILLUMINA 8360204700 bp
PRJNA766543 Genome-wide association study and transcriptome analysis of Kandelia obovata -
923
Library Title Platform Total Base VCF File
SRR16378849 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Brown_L 1 ILLUMINA 7642443900 bp
SRR16378850 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Green_L 3 ILLUMINA 7002786900 bp
SRR16378851 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Green_L 2 ILLUMINA 7332682500 bp
SRR16378852 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Green_L 1 ILLUMINA 7039235100 bp
SRR16378853 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Chimeric_L 3 ILLUMINA 5930209500 bp
SRR16378859 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Chimeric_L 2 ILLUMINA 5730407700 bp
SRR16378870 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Chimeric_L 1 ILLUMINA 6126731700 bp
SRR16378881 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Albino_L 3 ILLUMINA 6078828600 bp
SRR16378887 RNA-Seq of Kandelia obovata: plant grown under dark with leaf from China, Kandelia obovata, Green_D 3 ILLUMINA 6168704700 bp
SRR16378888 RNA-Seq of Kandelia obovata: plant grown under dark with leaf from China, Kandelia obovata, Green_D 2 ILLUMINA 6445874400 bp
SRR16378889 RNA-Seq of Kandelia obovata: plant grown under dark with leaf from China, Kandelia obovata, Green_D 1 ILLUMINA 6580177200 bp
SRR16378890 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Brown_L 3 ILLUMINA 5885181300 bp
SRR16378891 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Brown_L 2 ILLUMINA 6668178000 bp
SRR16378892 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Albino_L 2 ILLUMINA 6576676200 bp
SRR16378893 RNA-Seq of Kandelia obovata: plant grown under light with leaf from China, Kandelia obovata, Albino_L 1 ILLUMINA 6743142300 bp
PRJNA907372 Genome-wide analysis in freezing tolerance of Kandelia obovata Liu et al., 2022
924
Library Title Platform Total Base VCF File
SRR22489048 RNA-Seq of Kandelia obovata: plant under ABA\, 9.7% treatment with leaf, GSM6775380 ILLUMINA 7348197258 bp
SRR22489049 RNA-Seq of Kandelia obovata: plant under ABA\, 9.7% treatment with leaf, GSM6775379 ILLUMINA 7481253324 bp
SRR22489050 RNA-Seq of Kandelia obovata: plant under ABA\, 9.7% treatment with leaf, GSM6775378 ILLUMINA 8119091216 bp
SRR22489051 RNA-Seq of Kandelia obovata: plant under ABA\, -5.3% treatment with leaf, GSM6775377 ILLUMINA 7795674584 bp
SRR22489052 RNA-Seq of Kandelia obovata: plant under ABA\, -5.3% treatment with leaf, GSM6775376 ILLUMINA 6931523932 bp
SRR22489053 RNA-Seq of Kandelia obovata: plant under ABA\, -5.3% treatment with leaf, GSM6775375 ILLUMINA 6960891922 bp
SRR22489054 RNA-Seq of Kandelia obovata: plant under ABA\, -4.1% treatment with leaf, GSM6775374 ILLUMINA 7916428076 bp
SRR22489055 RNA-Seq of Kandelia obovata: plant under ABA\, -4.1% treatment with leaf, GSM6775373 ILLUMINA 7980522442 bp
SRR22489056 RNA-Seq of Kandelia obovata: plant under ABA\, -4.1% treatment with leaf, GSM6775372 ILLUMINA 7207973524 bp
SRR22489057 RNA-Seq of Kandelia obovata: plant under ABA\,10.2% treatment with leaf, GSM6775371 ILLUMINA 8131372348 bp
SRR22489058 RNA-Seq of Kandelia obovata: plant under ABA\,10.2% treatment with leaf, GSM6775370 ILLUMINA 7301182502 bp
SRR22489059 RNA-Seq of Kandelia obovata: plant under ABA\,10.2% treatment with leaf, GSM6775369 ILLUMINA 7298283302 bp
SRR22489060 RNA-Seq of Kandelia obovata: plant under 0.097 treatment with leaf, GSM6775368 ILLUMINA 8488347824 bp
SRR22489061 RNA-Seq of Kandelia obovata: plant under 0.097 treatment with leaf, GSM6775367 ILLUMINA 8074534136 bp
SRR22489062 RNA-Seq of Kandelia obovata: plant under 0.097 treatment with leaf, GSM6775366 ILLUMINA 7330745282 bp
SRR22489063 RNA-Seq of Kandelia obovata: plant under -0.053 treatment with leaf, GSM6775365 ILLUMINA 7358871448 bp
SRR22489064 RNA-Seq of Kandelia obovata: plant under -0.053 treatment with leaf, GSM6775364 ILLUMINA 7714566444 bp
SRR22489065 RNA-Seq of Kandelia obovata: plant under -0.053 treatment with leaf, GSM6775363 ILLUMINA 8009326598 bp
SRR22489066 RNA-Seq of Kandelia obovata: plant under -0.041 treatment with leaf, GSM6775362 ILLUMINA 7631032942 bp
SRR22489067 RNA-Seq of Kandelia obovata: plant under -0.041 treatment with leaf, GSM6775361 ILLUMINA 7698875430 bp
SRR22489068 RNA-Seq of Kandelia obovata: plant under -0.041 treatment with leaf, GSM6775360 ILLUMINA 6971121568 bp
SRR22489069 RNA-Seq of Kandelia obovata: plant under 0.102 treatment with leaf, GSM6775359 ILLUMINA 7391223802 bp
SRR22489070 RNA-Seq of Kandelia obovata: plant under 0.102 treatment with leaf, GSM6775358 ILLUMINA 6841452130 bp
SRR22489071 RNA-Seq of Kandelia obovata: plant under 0.102 treatment with leaf, GSM6775357 ILLUMINA 7525574542 bp
PRJNA927281 normal RNA-seq of Kandelia obovata Kuo et al., 2023
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Library Title Platform Total Base VCF File
SRR23237668 RNA-Seq of Kandelia obovata: seedling with root from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., R-18-1 ILLUMINA 6688890666 bp
SRR23237670 RNA-Seq of Kandelia obovata: seedling with root from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., R-1-2 ILLUMINA 7381315854 bp
SRR23237673 RNA-Seq of Kandelia obovata: seedling with leaf from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., L-18-2 ILLUMINA 6304459710 bp
SRR23237676 RNA-Seq of Kandelia obovata: seedling with stem from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., S-18-3 ILLUMINA 7569236680 bp
SRR23237679 RNA-Seq of Kandelia obovata: seedling with stem from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., S-1-3 ILLUMINA 6458989638 bp
SRR23237683 RNA-Seq of Kandelia obovata: seedling with root from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., R-18-2 ILLUMINA 5950653772 bp
SRR23237684 RNA-Seq of Kandelia obovata: seedling with leaf from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., L-1-2 ILLUMINA 6163687540 bp
SRR23237685 RNA-Seq of Kandelia obovata: seedling with leaf from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., L-1-1 ILLUMINA 5793191698 bp
SRR23237669 RNA-Seq of Kandelia obovata: seedling with root from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., R-1-3 ILLUMINA 6582513718 bp
SRR23237671 RNA-Seq of Kandelia obovata: seedling with root from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., R-1-1 ILLUMINA 6732827236 bp
SRR23237672 RNA-Seq of Kandelia obovata: seedling with leaf from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., L-18-3 ILLUMINA 6978343290 bp
SRR23237674 RNA-Seq of Kandelia obovata: seedling with leaf from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., L-18-1 ILLUMINA 6435690856 bp
SRR23237675 RNA-Seq of Kandelia obovata: seedling with leaf from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., L-1-3 ILLUMINA 5814221512 bp
SRR23237677 RNA-Seq of Kandelia obovata: seedling with stem from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., S-18-2 ILLUMINA 6190199082 bp
SRR23237678 RNA-Seq of Kandelia obovata: seedling with stem from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., S-18-1 ILLUMINA 6957880242 bp
SRR23237680 RNA-Seq of Kandelia obovata: seedling with stem from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., S-1-2 ILLUMINA 5931146460 bp
SRR23237681 RNA-Seq of Kandelia obovata: seedling with stem from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., S-1-1 ILLUMINA 6614658340 bp
SRR23237682 RNA-Seq of Kandelia obovata: seedling with root from China: zhejiang\,zhoushan, Seeds from Guangxi Province are planted in Zhoushan City., R-18-3 ILLUMINA 6825544416 bp

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