Omics-Seq

Project

Bioproject

Description

Publication

GVCF File

Library Num.

PRJNA255452

The goal of this project is to identify sweet cherry fruit transcripts using de novo assembly of RNA-seq.

Wei et al., 2015

Library	Title	Platform	Total Base
SRR1523288	RNA-Seq of Prunus avium: 35 DAF stage fruit, Tieton, RD-2	ILLUMINA	996419600 bp
SRR1523289	RNA-Seq of Prunus avium: 45 DAF stage fruit, Tieton, RD-3	ILLUMINA	1154127800 bp
SRR1523290	RNA-Seq of Prunus avium: 55 DAF stage fruit, Tieton, RD-4	ILLUMINA	1046560100 bp
SRR1523293	RNA-Seq of Prunus avium: 25 DAF stage fruit, 13-33, YD-1	ILLUMINA	763377600 bp
SRR1523294	RNA-Seq of Prunus avium: 35 DAF stage fruit, 13-33, YD-2	ILLUMINA	901654000 bp
SRR1523295	RNA-Seq of Prunus avium: 45 DAF stage fruit, 13-33, YD-3	ILLUMINA	889969100 bp
SRR1523296	RNA-Seq of Prunus avium: 55 DAF stage fruit, 13-33, YD-4	ILLUMINA	744916700 bp
SRR1532588	RNA-Seq of Prunus avium: mix 25-55 DAF stage fruit, Tieton, RTR	ILLUMINA	7044630800 bp
SRR1532598	RNA-Seq of Prunus avium: mix 25-55 DAF stage fruit, 13-33, YTR	ILLUMINA	6713340400 bp
SRR1518291	RNA-Seq of Prunus avium: 25 DAF stage fruit, Tieton, RD-1	ILLUMINA	731195800 bp

PRJNA329134

Prunus avium pedicel-fruit abscission zone transcriptome.

Hewitt et al., 2021

Library	Title	Platform	Total Base
SRR4343380	RNA-Seq of Prunus avium: mature plant young leaf from USA: Washington, Stella, Bing_transciptome	ILLUMINA	54288774000 bp
SRR4343381	RNA-Seq of Prunus avium: mature plant young leaf from USA: Washington, Chelan, Chelan_transciptome	ILLUMINA	55756415600 bp
SRR4343382	RNA-Seq of Prunus avium: mature plant young leaf from USA: Washington, Skeena, Skeena_transciptome	ILLUMINA	45360987800 bp

PRJNA369332

A hydrogen cyanamide-responsive transcriptome of sweet cherry flower buds from endodormancy to flowering.

Ionescu et al., 2017

Library	Title	Platform	Total Base
SRR5219258	RNA-Seq of Prunus avium: before treatment day 0 flower buds, GSM2472386	ILLUMINA	4127457516 bp
SRR5219259	RNA-Seq of Prunus avium: before treatment day 0 flower buds, GSM2472387	ILLUMINA	3916612946 bp
SRR5219260	RNA-Seq of Prunus avium: before treatment day 0 flower buds, GSM2472388	ILLUMINA	3740876986 bp
SRR5219261	RNA-Seq of Prunus avium: water-treated (control) day 1 flower buds, GSM2472389	ILLUMINA	3668278792 bp
SRR5219262	RNA-Seq of Prunus avium: water-treated (control) day 1 flower buds, GSM2472390	ILLUMINA	4088945408 bp
SRR5219263	RNA-Seq of Prunus avium: water-treated (control) day 1 flower buds, GSM2472391	ILLUMINA	3874782180 bp
SRR5219264	RNA-Seq of Prunus avium: water-treated (control) day 3 flower buds, GSM2472392	ILLUMINA	3625579830 bp
SRR5219265	RNA-Seq of Prunus avium: water-treated (control) day 3 flower buds, GSM2472393	ILLUMINA	4723769798 bp
SRR5219266	RNA-Seq of Prunus avium: water-treated (control) day 3 flower buds, GSM2472394	ILLUMINA	4386699064 bp
SRR5219267	RNA-Seq of Prunus avium: water-treated (control) day 6 flower buds, GSM2472395	ILLUMINA	4812312660 bp
SRR5219268	RNA-Seq of Prunus avium: water-treated (control) day 6 flower buds, GSM2472396	ILLUMINA	4503624542 bp
SRR5219269	RNA-Seq of Prunus avium: water-treated (control) day 6 flower buds, GSM2472397	ILLUMINA	4851081308 bp
SRR5219270	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 1 flower buds, GSM2472398	ILLUMINA	3944914358 bp
SRR5219271	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 1 flower buds, GSM2472399	ILLUMINA	4115518508 bp
SRR5219272	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 1 flower buds, GSM2472400	ILLUMINA	4315254290 bp
SRR5219273	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 3 flower buds, GSM2472401	ILLUMINA	4203678176 bp
SRR5219274	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 3 flower buds, GSM2472402	ILLUMINA	4212009060 bp
SRR5219275	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 3 flower buds, GSM2472403	ILLUMINA	3992957836 bp
SRR5219276	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 6 flower buds, GSM2472404	ILLUMINA	3705834026 bp
SRR5219277	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 6 flower buds, GSM2472405	ILLUMINA	4159755498 bp
SRR5219278	RNA-Seq of Prunus avium: hydrogen cyanamide-treated day 6 flower buds, GSM2472406	ILLUMINA	3402440530 bp

PRJNA474253

To reveal the transcriptional mechanisms regulating light-dependent anthocyanin accumulation in bicolored ‘Rainier’ cherries, we sequenced the transcriptomes of fruits grown in light or in darkness.

Library	Title	Platform	Total Base
SRR7250829	RNA-Seq of Prunus avium: 50 DPA stage grown in dark treatment fruit, Rainier, RD50	ILLUMINA	18274732700 bp
SRR7250830	RNA-Seq of Prunus avium: 50 DPA stage grown in light treatment fruit, Rainier, RL50	ILLUMINA	21770776300 bp
SRR7250831	RNA-Seq of Prunus avium: 27 DPA stage grown in light treatment fruit, Hongdeng, HL27	ILLUMINA	18104148250 bp
SRR7250832	RNA-Seq of Prunus avium: 27 DPA stage grown in dark treatment fruit, Hongdeng, HD27	ILLUMINA	14398557250 bp
SRR7250833	RNA-Seq of Prunus avium: 33 DPA stage grown in light treatment fruit, Hongdeng, HL33	ILLUMINA	17473855750 bp
SRR7250834	RNA-Seq of Prunus avium: 33 DPA stage grown in dark treatment fruit, Hongdeng, HD33	ILLUMINA	17904011050 bp

PRJNA503752

Assembled a high-quality reference genome of the diploid sweet cherry (Prunus avium, 2n=2x=16) cv. Tieton using the linked reads sequencing platform.

Wang et al., 2020

Library	Title	Platform	Total Base	VCF File
SRR8157066	RNA-Seq of Prunus avium: 5 years PLANT WITH leaf FROM China: Shandong, Tieton, Lane2	ILLUMINA	11898266426 bp

PRJNA529517

Identification and characterization of cherry (Cerasus pseudocerasus G. Don) genes responding to parthenocarpy induced by GA3 through transcriptome analysis.

Wen et al., 2019

Library	Title	Platform	Total Base
SRR8797227	RNA-Seq of Prunus avium: anthesis stage plant with fruit from China, Meizao, Cherry_T1	ILLUMINA	7164102300 bp
SRR8797228	RNA-Seq of Prunus avium: hard-core stage plant with fruit from China, Meizao, Cherry_T2	ILLUMINA	6787781100 bp
SRR8797229	RNA-Seq of Prunus avium: hard-core stage plant with fruit from China, Meizao, Cherry_CK2	ILLUMINA	6664840200 bp
SRR8797230	RNA-Seq of Prunus avium: hard-core stage plant with fruit from China, Meizao, Cherry_CK2	ILLUMINA	6789474600 bp
SRR8797231	RNA-Seq of Prunus avium: anthesis stage plant with fruit from China, Meizao, Cherry_T1	ILLUMINA	6783792900 bp
SRR8797232	RNA-Seq of Prunus avium: anthesis stage plant with fruit from China, Meizao, Cherry_T1	ILLUMINA	7154138700 bp
SRR8797233	RNA-Seq of Prunus avium: anthesis stage plant with fruit from China, Meizao, Cherry_CK1	ILLUMINA	6858538200 bp
SRR8797234	RNA-Seq of Prunus avium: anthesis stage plant with fruit from China, Meizao, Cherry_CK1	ILLUMINA	6794694300 bp
SRR8797235	RNA-Seq of Prunus avium: anthesis stage plant with fruit from China, Meizao, Cherry_CK1	ILLUMINA	6995506500 bp
SRR8797236	RNA-Seq of Prunus avium: hard-core stage plant with fruit from China, Meizao, Cherry_CK2	ILLUMINA	6749055900 bp
SRR8797237	RNA-Seq of Prunus avium: hard-core stage plant with fruit from China, Meizao, Cherry_T2	ILLUMINA	7121655000 bp
SRR8797238	RNA-Seq of Prunus avium: hard-core stage plant with fruit from China, Meizao, Cherry_T2	ILLUMINA	6877429200 bp

PRJNA540235

Trancriptomic analysis of flower bud dormancy in sweet cherry (sweet cherry).

Vimont et al., 2019

Library	Title	Platform	Total Base
SRR8984342	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, Cristobalina, GSM3738439	ILLUMINA	2679934562 bp
SRR8984343	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, Cristobalina, GSM3738440	ILLUMINA	4351935006 bp
SRR8984344	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, Cristobalina, GSM3738441	ILLUMINA	2791805136 bp
SRR8984345	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, GARNET, GSM3738442	ILLUMINA	3155194922 bp
SRR8984346	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, GARNET, GSM3738443	ILLUMINA	2592337479 bp
SRR8984347	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, GARNET, GSM3738444	ILLUMINA	2179360709 bp
SRR8984348	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, Regina, GSM3738445	ILLUMINA	3415779628 bp
SRR8984349	RNA-Seq of Prunus avium: collected on July 7\, 2015 flower buds, Regina, GSM3738446	ILLUMINA	3613889661 bp
SRR8984350	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, Cristobalina, GSM3738447	ILLUMINA	4372994156 bp
SRR8984351	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, Cristobalina, GSM3738448	ILLUMINA	2436212729 bp
SRR8984352	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, Cristobalina, GSM3738449	ILLUMINA	3469494233 bp
SRR8984353	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, GARNET, GSM3738450	ILLUMINA	5270309655 bp
SRR8984354	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, GARNET, GSM3738451	ILLUMINA	5635152248 bp
SRR8984355	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, GARNET, GSM3738452	ILLUMINA	3574265425 bp
SRR8984356	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, Regina, GSM3738453	ILLUMINA	4305651773 bp
SRR8984357	RNA-Seq of Prunus avium: collected on August 4\, 2015 flower buds, Regina, GSM3738454	ILLUMINA	7771999493 bp
SRR8984358	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, Cristobalina, GSM3738455	ILLUMINA	5577875253 bp
SRR8984359	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, Cristobalina, GSM3738456	ILLUMINA	3763079633 bp
SRR8984360	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, Cristobalina, GSM3738457	ILLUMINA	4894048729 bp
SRR8984361	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, GARNET, GSM3738458	ILLUMINA	4605872470 bp
SRR8984362	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, GARNET, GSM3738459	ILLUMINA	3796345715 bp
SRR8984363	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, GARNET, GSM3738460	ILLUMINA	4209907030 bp
SRR8984364	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, Regina, GSM3738461	ILLUMINA	4449393174 bp
SRR8984365	RNA-Seq of Prunus avium: collected on September 1\, 2015 flower buds, Regina, GSM3738462	ILLUMINA	3819768948 bp
SRR8984366	RNA-Seq of Prunus avium: collected on October 6\, 2015 flower buds, Cristobalina, GSM3738463	ILLUMINA	4733927878 bp
SRR8984367	RNA-Seq of Prunus avium: collected on October 6\, 2015 flower buds, Cristobalina, GSM3738464	ILLUMINA	4201001161 bp
SRR8984368	RNA-Seq of Prunus avium: collected on October 6\, 2015 flower buds, GARNET, GSM3738465	ILLUMINA	3946012291 bp
SRR8984369	RNA-Seq of Prunus avium: collected on October 6\, 2015 flower buds, GARNET, GSM3738466	ILLUMINA	3659164237 bp
SRR8984370	RNA-Seq of Prunus avium: collected on October 6\, 2015 flower buds, Regina, GSM3738467	ILLUMINA	4372773173 bp
SRR8984371	RNA-Seq of Prunus avium: collected on October 6\, 2015 flower buds, Regina, GSM3738468	ILLUMINA	4660763041 bp
SRR8984372	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, Cristobalina, GSM3738469	ILLUMINA	4052068128 bp
SRR8984373	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, Cristobalina, GSM3738470	ILLUMINA	4198762897 bp
SRR8984374	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, Cristobalina, GSM3738471	ILLUMINA	3226906111 bp
SRR8984375	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, GARNET, GSM3738472	ILLUMINA	3662130787 bp
SRR8984376	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, GARNET, GSM3738473	ILLUMINA	4345404421 bp
SRR8984377	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, GARNET, GSM3738474	ILLUMINA	5264505530 bp
SRR8984378	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, Regina, GSM3738475	ILLUMINA	3653532285 bp
SRR8984379	RNA-Seq of Prunus avium: collected on November 3\, 2015 flower buds, Regina, GSM3738476	ILLUMINA	3685736525 bp
SRR8984380	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, Cristobalina, GSM3738477	ILLUMINA	4209767353 bp
SRR8984381	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, Cristobalina, GSM3738478	ILLUMINA	3769738138 bp
SRR8984382	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, Cristobalina, GSM3738479	ILLUMINA	4027143371 bp
SRR8984383	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, GARNET, GSM3738480	ILLUMINA	4024882533 bp
SRR8984384	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, GARNET, GSM3738481	ILLUMINA	3680863090 bp
SRR8984385	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, GARNET, GSM3738482	ILLUMINA	3801159291 bp
SRR8984386	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, Regina, GSM3738483	ILLUMINA	4273908283 bp
SRR8984387	RNA-Seq of Prunus avium: collected on December 1\, 2015 flower buds, Regina, GSM3738484	ILLUMINA	4396021223 bp
SRR8984388	RNA-Seq of Prunus avium: collected on December 15\, 2015 flower buds, Cristobalina, GSM3738485	ILLUMINA	4272369973 bp
SRR8984389	RNA-Seq of Prunus avium: collected on December 15\, 2015 flower buds, Cristobalina, GSM3738486	ILLUMINA	4837537191 bp
SRR8984390	RNA-Seq of Prunus avium: collected on December 15\, 2015 flower buds, Cristobalina, GSM3738487	ILLUMINA	5216988359 bp
SRR8984391	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, Cristobalina, GSM3738488	ILLUMINA	4746681890 bp
SRR8984392	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, Cristobalina, GSM3738489	ILLUMINA	4664661148 bp
SRR8984393	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, Cristobalina, GSM3738490	ILLUMINA	4320382883 bp
SRR8984394	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, GARNET, GSM3738491	ILLUMINA	4703688098 bp
SRR8984395	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, GARNET, GSM3738492	ILLUMINA	4778924933 bp
SRR8984396	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, Regina, GSM3738493	ILLUMINA	3783565412 bp
SRR8984397	RNA-Seq of Prunus avium: collected on December 29\, 2015 flower buds, Regina, GSM3738494	ILLUMINA	4476104213 bp
SRR8984398	RNA-Seq of Prunus avium: collected on January 13\, 2016 flower buds, GARNET, GSM3738495	ILLUMINA	4398088628 bp
SRR8984399	RNA-Seq of Prunus avium: collected on January 13\, 2016 flower buds, GARNET, GSM3738496	ILLUMINA	5070403544 bp
SRR8984400	RNA-Seq of Prunus avium: collected on January 13\, 2016 flower buds, GARNET, GSM3738497	ILLUMINA	4059087587 bp
SRR8984401	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, Cristobalina, GSM3738498	ILLUMINA	4416950776 bp
SRR8984402	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, Cristobalina, GSM3738499	ILLUMINA	4451451977 bp
SRR8984403	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, Cristobalina, GSM3738500	ILLUMINA	4731823577 bp
SRR8984404	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, GARNET, GSM3738501	ILLUMINA	4138393461 bp
SRR8984405	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, GARNET, GSM3738502	ILLUMINA	4368243890 bp
SRR8984406	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, GARNET, GSM3738503	ILLUMINA	4166472215 bp
SRR8984407	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, Regina, GSM3738504	ILLUMINA	4115471152 bp
SRR8984408	RNA-Seq of Prunus avium: collected on January 26\, 2016 flower buds, Regina, GSM3738505	ILLUMINA	4241194569 bp
SRR8984409	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, Cristobalina, GSM3738506	ILLUMINA	4286855213 bp
SRR8984410	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, Cristobalina, GSM3738507	ILLUMINA	4087378596 bp
SRR8984411	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, Cristobalina, GSM3738508	ILLUMINA	4488935435 bp
SRR8984412	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, GARNET, GSM3738509	ILLUMINA	3947746417 bp
SRR8984413	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, GARNET, GSM3738510	ILLUMINA	4281330131 bp
SRR8984414	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, GARNET, GSM3738511	ILLUMINA	4296807068 bp
SRR8984415	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, Regina, GSM3738512	ILLUMINA	4573991765 bp
SRR8984416	RNA-Seq of Prunus avium: collected on February 23\, 2016 flower buds, Regina, GSM3738513	ILLUMINA	4205458330 bp
SRR8984417	RNA-Seq of Prunus avium: collected on March 8\, 2016 flower buds, Regina, GSM3738514	ILLUMINA	4691552098 bp
SRR8984418	RNA-Seq of Prunus avium: collected on March 8\, 2016 flower buds, Regina, GSM3738515	ILLUMINA	4642362922 bp
SRR8984419	RNA-Seq of Prunus avium: collected on March 22\, 2016 flower buds, GARNET, GSM3738516	ILLUMINA	3929083838 bp
SRR8984420	RNA-Seq of Prunus avium: collected on March 22\, 2016 flower buds, GARNET, GSM3738517	ILLUMINA	4033996955 bp
SRR8984421	RNA-Seq of Prunus avium: collected on March 22\, 2016 flower buds, GARNET, GSM3738518	ILLUMINA	3923903666 bp
SRR8984422	RNA-Seq of Prunus avium: collected on March 22\, 2016 flower buds, Regina, GSM3738519	ILLUMINA	4373596834 bp
SRR8984423	RNA-Seq of Prunus avium: collected on March 22\, 2016 flower buds, Regina, GSM3738520	ILLUMINA	4308419663 bp

PRJNA550274

omparative transcriptomic analysis reveals novel roles of transcription factors and hormones during the flowering induction and floral bud differentiation in sweet cherry trees (Prunus avium L. cv. Bing).

Villar et al., 2020

Library	Title	Platform	Total Base
SRR10189790	RNA-Seq of Prunus avium: root from Chile, F-12, R_03, F-12 root	ILLUMINA	5565277928 bp
SRR10189791	RNA-Seq of Prunus avium: root from Chile, F-12, R_02, F-12 root	ILLUMINA	5407632826 bp
SRR10189792	RNA-Seq of Prunus avium: root from Chile, F-12, R_01, F-12 root	ILLUMINA	4298301636 bp
SRR9588936	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S4_01, Pavium_buds	ILLUMINA	4093156230 bp
SRR9588937	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S3_03, Pavium_buds	ILLUMINA	4989883608 bp
SRR9588938	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S4_03, Pavium_buds	ILLUMINA	4807775308 bp
SRR9588939	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S4_02, Pavium_buds	ILLUMINA	4083989630 bp
SRR9588940	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S1_02, Pavium_buds	ILLUMINA	6269808558 bp
SRR9588941	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S1_01, Pavium_buds	ILLUMINA	7882914014 bp
SRR9588942	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S2_01, Pavium_buds	ILLUMINA	6649827890 bp
SRR9588943	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S1_03, Pavium_buds	ILLUMINA	3953723200 bp
SRR9588944	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S2_03, Pavium_buds	ILLUMINA	5015259756 bp
SRR9588945	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S2_02, Pavium_buds	ILLUMINA	7322777988 bp
SRR9588946	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S3_02, Pavium_buds	ILLUMINA	6752958282 bp
SRR9588947	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, S3_01, Pavium_buds	ILLUMINA	6855726214 bp
SRR9598553	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, D_03, Pavium_buds	ILLUMINA	4950710152 bp
SRR9598554	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, D_01, Pavium_buds	ILLUMINA	4084636724 bp
SRR9598555	RNA-Seq of Prunus avium: floral buds from Chile: Rengo, Bing, D_02, Pavium_buds	ILLUMINA	4610852190 bp
SRR9594985	RNA-Seq of Prunus avium: leaf from Chile: Rengo, Bing, leafd-03, Plant sample from Prunus avium	ILLUMINA	4792653904 bp
SRR9594986	RNA-Seq of Prunus avium: leaf from Chile: Rengo, Bing, leafd-01, Plant sample from Prunus avium	ILLUMINA	4708510228 bp
SRR9594987	RNA-Seq of Prunus avium: leaf from Chile: Rengo, Bing, leafd-02, Plant sample from Prunus avium	ILLUMINA	4754023388 bp

PRJNA595502

ChIP-seq and RNA-seq for complex and low-abundance tree buds reveal chromatin and expression co-dynamics during sweet cherry bud dormancy (sweet cherry).

Vimont et al., 2019

Library	Title	Platform	Total Base
SRR10689777	RNA-Seq of Prunus avium: dormant flower buds, Burlat, GSM4217386	ILLUMINA	2878269394 bp
SRR10689778	RNA-Seq of Prunus avium: dormant flower buds, Burlat, GSM4217387	ILLUMINA	2337615033 bp
SRR10689779	RNA-Seq of Prunus avium: dormant flower buds, Burlat, GSM4217388	ILLUMINA	2140041998 bp
SRR10689780	RNA-Seq of Prunus avium: dormant flower buds, Burlat, GSM4217389	ILLUMINA	5244691322 bp
SRR10689781	RNA-Seq of Prunus avium: dormant flower buds, Burlat, GSM4217390	ILLUMINA	2107543079 bp
SRR10689782	RNA-Seq of Prunus avium: dormant flower buds, Burlat, GSM4217391	ILLUMINA	3500141556 bp
SRR10689783	RNA-Seq of Prunus avium: non-dormant flower buds, Burlat, GSM4217392	ILLUMINA	2936983856 bp
SRR10689784	RNA-Seq of Prunus avium: non-dormant flower buds, Burlat, GSM4217393	ILLUMINA	6084344014 bp
SRR10689785	RNA-Seq of Prunus avium: non-dormant flower buds, Burlat, GSM4217394	ILLUMINA	3933288944 bp

PRJNA611731

Raw data from RNA-seq to study transcriptomic changes during chilling accumulation in dormant buds.

Rothkegel et al., 2020

Library	Title	Platform	Total Base
SRR11291057	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 516CH	ILLUMINA	10274943110 bp
SRR11291058	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 516CH	ILLUMINA	11456053068 bp
SRR11291059	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 516CH	ILLUMINA	10882607388 bp
SRR11291060	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 348CH	ILLUMINA	7889320484 bp
SRR11291061	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 348CH	ILLUMINA	8958903616 bp
SRR11291062	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 348CH	ILLUMINA	8801804378 bp
SRR11291063	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 0CH	ILLUMINA	8799634898 bp
SRR11291064	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 0CH	ILLUMINA	9380510340 bp
SRR11291065	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: San Francisco de Mostazal, Royal Dawn, Royal Dawn 0CH	ILLUMINA	9520493108 bp

PRJNA611733

Raw data from RNA-seq to study transcriptomic changes during chilling accumulation in dormant buds.

Rothkegel et al., 2020

Library	Title	Platform	Total Base
SRR11300630	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 1637CH	ILLUMINA	7280174334 bp
SRR11300631	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 1295CH	ILLUMINA	6814078322 bp
SRR11300632	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 1295CH	ILLUMINA	7229195998 bp
SRR11300633	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 1295CH	ILLUMINA	6095698248 bp
SRR11300634	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 443CH	ILLUMINA	6462746388 bp
SRR11300635	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 443CH	ILLUMINA	6873880826 bp
SRR11300636	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 443CH	ILLUMINA	8147372656 bp
SRR11300637	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 0CH	ILLUMINA	7771345818 bp
SRR11300638	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 1637CH	ILLUMINA	7825098018 bp
SRR11300639	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 1637CH	ILLUMINA	8530955304 bp
SRR11300640	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 0CH	ILLUMINA	6660487016 bp
SRR11300641	RNA-Seq of Prunus avium: dormancy stage floral bud from Chile: Quillota, Kordia, Kordia 0CH	ILLUMINA	6983841546 bp

PRJNA624546

Temporal and spatial changes in gene expression of sweet cherry after changing abiotic parameters.

Michailidis et al., 2022

Library	Title	Platform	Total Base
SRR16772052	RNA-Seq of Prunus avium: 9 years harvest stage foliar CaCl2 applications _1 treatment plant with flesh from Greece: Edessa, Tragana Edessis, P_avium_MM22	ILLUMINA	2765434480 bp
SRR16772053	RNA-Seq of Prunus avium: 9 years harvest stage untreated_3 treatment plant with flesh from Greece: Edessa, Tragana Edessis, P_avium_MM21	ILLUMINA	3393418548 bp
SRR16772054	RNA-Seq of Prunus avium: 9 years harvest stage untreated_2 treatment plant with flesh from Greece: Edessa, Tragana Edessis, P_avium_MM20	ILLUMINA	3435627449 bp
SRR16772055	RNA-Seq of Prunus avium: 9 years harvest stage untreated_1 treatment plant with flesh from Greece: Edessa, Tragana Edessis, P_avium_MM19	ILLUMINA	2712437938 bp
SRR16772056	RNA-Seq of Prunus avium: 9 years harvest stage foliar CaCl2 applications_3 treatment plant with skin from Greece: Edessa, Tragana Edessis, P_avium_MM18	ILLUMINA	2804593751 bp
SRR16772057	RNA-Seq of Prunus avium: 9 years harvest stage foliar CaCl2 applications_2 treatment plant with skin from Greece: Edessa, Tragana Edessis, P_avium_MM17	ILLUMINA	2317389728 bp
SRR16772058	RNA-Seq of Prunus avium: 9 years harvest stage foliar CaCl2 applications _1 treatment plant with skin from Greece: Edessa, Tragana Edessis, P_avium_MM16	ILLUMINA	2312663116 bp
SRR16772059	RNA-Seq of Prunus avium: 9 years harvest stage untreated_3 treatment plant with skin from Greece: Edessa, Tragana Edessis, P_avium_MM15	ILLUMINA	2867005793 bp
SRR16772060	RNA-Seq of Prunus avium: 9 years harvest stage foliar CaCl2 applications_3 treatment plant with flesh from Greece: Edessa, Tragana Edessis, P_avium_MM24	ILLUMINA	3973941587 bp
SRR16772061	RNA-Seq of Prunus avium: 9 years harvest stage foliar CaCl2 applications_2 treatment plant with flesh from Greece: Edessa, Tragana Edessis, P_avium_MM23	ILLUMINA	2513268585 bp
SRR16772062	RNA-Seq of Prunus avium: 9 years harvest stage untreated_2 treatment plant with skin from Greece: Edessa, Tragana Edessis, P_avium_MM14	ILLUMINA	3026266994 bp
SRR16772063	RNA-Seq of Prunus avium: 9 years harvest stage untreated_1 treatment plant with skin from Greece: Edessa, Tragana Edessis, P_avium_MM13	ILLUMINA	2652312699 bp
SRR11525162	RNA-Seq of Prunus avium: 10 years s5 stage foliar CaCl2 applications _1 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM10	ILLUMINA	2446763923 bp
SRR11525163	RNA-Seq of Prunus avium: 10 years s5 stage untreated_3 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM9	ILLUMINA	4579979738 bp
SRR11525164	RNA-Seq of Prunus avium: 10 years s5 stage untreated_2 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM8	ILLUMINA	3384257074 bp
SRR11525165	RNA-Seq of Prunus avium: 10 years s5 stage untreated_1 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM7	ILLUMINA	1551303494 bp
SRR11525166	RNA-Seq of Prunus avium: 10 years s4 stage foliar CaCl2 applications_3 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM6	ILLUMINA	1796460093 bp
SRR11525167	RNA-Seq of Prunus avium: 10 years s4 stage foliar CaCl2 applications_2 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM5	ILLUMINA	2015792863 bp
SRR11525168	RNA-Seq of Prunus avium: 10 years s4 stage foliar CaCl2 applications _1 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM4	ILLUMINA	2706243567 bp
SRR11525169	RNA-Seq of Prunus avium: 10 years s4 stage untreated_3 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM3	ILLUMINA	2575962817 bp
SRR11525170	RNA-Seq of Prunus avium: 10 years s5 stage foliar CaCl2 applications_3 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM12	ILLUMINA	3035984276 bp
SRR11525171	RNA-Seq of Prunus avium: 10 years s5 stage foliar CaCl2 applications_2 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM11	ILLUMINA	2241749189 bp
SRR11525172	RNA-Seq of Prunus avium: 10 years s4 stage untreated_2 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM2	ILLUMINA	2773425133 bp
SRR11525173	RNA-Seq of Prunus avium: 10 years s4 stage untreated_1 treatment plant with fruit from Greece: Edessa, Tsolakeika, P_avium_MM1	ILLUMINA	2760121238 bp

PRJNA636209

Study on the abscission mechanism of prunus avium carpopodium.

Qiu et al., 2021

Library	Title	Platform	Total Base
SRR11886206	RNA-Seq of Prunus avium: 7 years fruitlet stage non-abscising carpopodium phenotype plant with carpopodium from China, santina, tissue sample6, CN3	ILLUMINA	8855632800 bp
SRR11886207	RNA-Seq of Prunus avium: 7 years fruitlet stage non-abscising carpopodium phenotype plant with carpopodium from China, santina, tissue sample5, CN2	ILLUMINA	7825045500 bp
SRR11886208	RNA-Seq of Prunus avium: 7 years fruitlet stage non-abscising carpopodium phenotype plant with carpopodium from China, santina, tissue sample4, CN1	ILLUMINA	7552457700 bp
SRR11886209	RNA-Seq of Prunus avium: 7 years fruitlet stage abscising carpopodium phenotype plant with carpopodium from China, santina, tissue sample3, CA3	ILLUMINA	8307522000 bp
SRR11886210	RNA-Seq of Prunus avium: 7 years fruitlet stage abscising carpopodium phenotype plant with carpopodium from China, santina, tissue sample2, CA2	ILLUMINA	7170493500 bp
SRR11886211	RNA-Seq of Prunus avium: 7 years fruitlet stage abscising carpopodium phenotype plant with carpopodium from China, santina, tissue sample1, CA1	ILLUMINA	6485314800 bp

PRJNA637927

Raw data from RNA-seq to study abscission mechanism of sweet cherry fruitlet.

Library	Title	Platform	Total Base
SRR11946735	RNA-Seq of Prunus avium: 6 years plant with 27 days after flowering stage fruit from China, Santina, tissue sample10, SN1-1	ILLUMINA	8305778100 bp
SRR11946736	RNA-Seq of Prunus avium: 6 years plant with 27 days after flowering stage fruit from China, Santina, tissue sample9, SA1-3	ILLUMINA	8071603200 bp
SRR11946737	RNA-Seq of Prunus avium: 6 years plant with 27 days after flowering stage fruit from China, Santina, tissue sample8, SA1-2	ILLUMINA	8561176200 bp
SRR11946738	RNA-Seq of Prunus avium: 6 years plant with 27 days after flowering stage fruit from China, Santina, tissue sample7, SA1-1	ILLUMINA	7809392100 bp
SRR11946739	RNA-Seq of Prunus avium: 6 years plant with 15 days after flowering stage fruit from China, Santina, tissue sample6, FN1-3	ILLUMINA	7711842300 bp
SRR11946740	RNA-Seq of Prunus avium: 6 years plant with 15 days after flowering stage fruit from China, Santina, tissue sample5, FN1-2	ILLUMINA	7267701000 bp
SRR11946741	RNA-Seq of Prunus avium: 6 years plant with 15 days after flowering stage fruit from China, Santina, tissue sample4, FN1-1	ILLUMINA	6773837700 bp
SRR11946742	RNA-Seq of Prunus avium: 6 years plant with 15 days after flowering stage fruit from China, Santina, tissue sample3, FA1-3	ILLUMINA	8465945100 bp
SRR11946743	RNA-Seq of Prunus avium: 6 years plant with 27 days after flowering stage fruit from China, Santina, tissue sample12, SN1-3	ILLUMINA	6528316800 bp
SRR11946744	RNA-Seq of Prunus avium: 6 years plant with 27 days after flowering stage fruit from China, Santina, tissue sample11, SN1-2	ILLUMINA	7113791400 bp
SRR11946745	RNA-Seq of Prunus avium: 6 years plant with 15 days after flowering stage fruit from China, Santina, tissue sample2, FA1-2	ILLUMINA	7716575400 bp
SRR11946746	RNA-Seq of Prunus avium: 6 years plant with 15 days after flowering stage fruit from China, Santina, tissue sample1, FA1-1	ILLUMINA	8784379800 bp

PRJNA678548

Transcription integrated with metabolism.

Library	Title	Platform	Total Base
SRR13069806	RNA-Seq of Prunus avium: 10 years 17 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T9	ILLUMINA	8183902722 bp
SRR13069807	RNA-Seq of Prunus avium: 10 years 15 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T8	ILLUMINA	8495315266 bp
SRR13069808	RNA-Seq of Prunus avium: 10 years 13 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T7	ILLUMINA	9664149528 bp
SRR13069809	RNA-Seq of Prunus avium: 10 years 11 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T6	ILLUMINA	9353501500 bp
SRR13069810	RNA-Seq of Prunus avium: 10 years 9 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T5	ILLUMINA	9097670320 bp
SRR13069811	RNA-Seq of Prunus avium: 10 years 7 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T4	ILLUMINA	10247313860 bp
SRR13069812	RNA-Seq of Prunus avium: 10 years 5 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T3	ILLUMINA	8782478376 bp
SRR13069813	RNA-Seq of Prunus avium: 10 years 4 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T2	ILLUMINA	8750262034 bp
SRR13069814	RNA-Seq of Prunus avium: 10 years 1 disease stage plant with coloring period stage fruit with pericarp from China: shandong\,taian, Meizao, Cherry T1	ILLUMINA	7275252448 bp

PRJNA678716

To investigate the spatial and temporal mechanism underlying sweet cherry fruit cracking, skin and flesh tissue from the cracking susceptible Early Bigi and the cracking tolerant Regina cultivars were sampled prior and just after water dipping treatment for 1 hour to characterize water-affected metabolic networks that putatively involved in fruit cracking.

Michailidis et al., 2021

Library	Title	Platform	Total Base
SRR13091159	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit flesh from Greece, Regina, 4430_J, Reg_D_F_1_raw	ILLUMINA	1987429257 bp
SRR13091160	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit skin from Greece, Regina, 4430_I, Reg_D_S_3_raw	ILLUMINA	2226711951 bp
SRR13091161	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit skin from Greece, Regina, 4430_H, Reg_D_S_2_raw	ILLUMINA	2149205019 bp
SRR13091162	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit skin from Greece, Regina, 4430_G, Reg_D_S_1_raw	ILLUMINA	2059941934 bp
SRR13091163	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit flesh from Greece, Regina, 4430_F, Reg_H_F_3_raw	ILLUMINA	2219405545 bp
SRR13091164	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit flesh from Greece, Regina, 4430_E, Reg_H_F_2_raw	ILLUMINA	1880577388 bp
SRR13091165	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit flesh from Greece, Regina, 4430_D, Reg_H_F_1_raw	ILLUMINA	2116701330 bp
SRR13091166	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit flesh from Greece, Early Bigi, 4500_B, EB_D_F_3_raw	ILLUMINA	2199752342 bp
SRR13091167	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit flesh from Greece, Early Bigi, 4430_W, EB_D_F_2_raw	ILLUMINA	2094858581 bp
SRR13091168	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit flesh from Greece, Early Bigi, 4430_V, EB_D_F_1_raw	ILLUMINA	2076867337 bp
SRR13091169	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit skin from Greece, Early Bigi, 4430_U, EB_D_S_3_raw	ILLUMINA	1966255927 bp
SRR13091170	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit skin from Greece, Regina, 4430_C, Reg_H_S_3_raw	ILLUMINA	2064451992 bp
SRR13091171	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit skin from Greece, Early Bigi, 4430_T, EB_D_S_2_raw	ILLUMINA	2290571097 bp
SRR13091172	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit skin from Greece, Early Bigi, 4500_A, EB_D_S_1_raw	ILLUMINA	2013067547 bp
SRR13091173	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit flesh from Greece, Early Bigi, 4430_R, EB_H_F_3_raw	ILLUMINA	1976004023 bp
SRR13091174	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit flesh from Greece, Early Bigi, 4430_Q, EB_H_F_2_raw	ILLUMINA	2116116886 bp
SRR13091175	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit flesh from Greece, Early Bigi, 4430_P, EB_H_F_1_raw	ILLUMINA	2109534174 bp
SRR13091176	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit skin from Greece, Early Bigi, 4430_O, EB_H_S_3_raw	ILLUMINA	2116276680 bp
SRR13091177	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit skin from Greece, Early Bigi, 4430_N, EB_H_S_2_raw	ILLUMINA	1936625019 bp
SRR13091178	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit skin from Greece, Early Bigi, 4430_M, EB_H_S_1_raw	ILLUMINA	2084735984 bp
SRR13091179	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit flesh from Greece, Regina, 4430_L, Reg_D_F_3_raw	ILLUMINA	2109185979 bp
SRR13091180	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with water dipping treatment for 1 hour fruit with fruit flesh from Greece, Regina, 4430_K, Reg_D_F_2_raw	ILLUMINA	2313307142 bp
SRR13091181	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit skin from Greece, Regina, 4430_B, Reg_H_S_2_raw	ILLUMINA	2007819467 bp
SRR13091182	RNA-Seq of Prunus avium: 10 years commercial harvest stage plant with no treatment fruit with fruit skin from Greece, Regina, 4430_A, Reg_H_S_1_raw	ILLUMINA	2214345901 bp

PRJNA681747

The aim of the study is to find out key genes and regulators of sweet cherry anthocyanin biosynthesis.

Yang et al., 2021

Library	Title	Platform	Total Base
SRR13171767	RNA-Seq of Prunus avium: peel from China: Shandong, Hong deng, peel 2 repeat1, color10, PHD25A	ILLUMINA	6994496700 bp
SRR13171768	RNA-Seq of Prunus avium: peel from China: Shandong, Hong deng, peel 1 repeat3, color9, PHD11C	ILLUMINA	6963212100 bp
SRR13171769	RNA-Seq of Prunus avium: peel from China: Shandong, Hong deng, peel 1 repeat2, color8, PHD11B	ILLUMINA	6956760600 bp
SRR13171770	RNA-Seq of Prunus avium: peel from China: Shandong, Hong deng, peel 1 repeat1, color7, PHD11A	ILLUMINA	7142307600 bp
SRR13171771	RNA-Seq of Prunus avium: flesh from China: Shandong, Hong deng, flesh 2 repeat3, color6, FHD25C	ILLUMINA	8614369200 bp
SRR13171772	RNA-Seq of Prunus avium: flesh from China: Shandong, Hong deng, flesh 2 repeat2, color5, FHD25B	ILLUMINA	6522610200 bp
SRR13171773	RNA-Seq of Prunus avium: flesh from China: Shandong, Hong deng, flesh 2 repeat1, color4, FHD25A	ILLUMINA	7297238400 bp
SRR13171774	RNA-Seq of Prunus avium: flesh from China: Shandong, Hong deng, flesh 1 repeat3, color3, FHD11C	ILLUMINA	6718791000 bp
SRR13171775	RNA-Seq of Prunus avium: peel from China: Shandong, Hong deng, peel 2 repeat3, color12, PHD25C	ILLUMINA	7845481500 bp
SRR13171776	RNA-Seq of Prunus avium: peel from China: Shandong, Hong deng, peel 2 repeat2, color11, PHD25B	ILLUMINA	7092121800 bp
SRR13171777	RNA-Seq of Prunus avium: flesh from China: Shandong, Hong deng, flesh 1 repeat2, color2, FHD11B	ILLUMINA	6534650400 bp
SRR13171778	RNA-Seq of Prunus avium: flesh from China: Shandong, Hong deng, flesh 1 repeat1, color1, FHD11A	ILLUMINA	8277404400 bp

PRJNA701044

Sequencing of sweet cherry tissues.

Library	Title	Platform	Total Base
SRR13686248	RNA-Seq of Prunus avium: leaves from Greece, sweet cherry, leaves	ILLUMINA	12915217800 bp
SRR13686249	RNA-Seq of Prunus avium: fourth stage fruit from Greece, sweet cherry, fruit_4th_stage	ILLUMINA	11831658400 bp
SRR13686250	RNA-Seq of Prunus avium: third stage fruit from Greece, sweet cherry, fruit_3rd_stage	ILLUMINA	10516501400 bp
SRR13686251	RNA-Seq of Prunus avium: second stage fruit from Greece, sweet cherry, fruit_2nd_stage	ILLUMINA	11883459600 bp
SRR13686252	RNA-Seq of Prunus avium: first stage flower from Greece, sweet cherry, flower_1st _stage	ILLUMINA	12570887200 bp
SRR13686253	RNA-Seq of Prunus avium: flower buds from Greece, sweet cherry, flower_buds	ILLUMINA	12676357800 bp
SRR13686254	RNA-Seq of Prunus avium: flower from Greece, sweet cherry, flower	ILLUMINA	12362873000 bp
SRR13686255	RNA-Seq of Prunus avium: dormancy buds from Greece, sweet cherry, dormancy_buds	ILLUMINA	12892467200 bp
SRR13686256	RNA-Seq of Prunus avium: young leaves from Greece, sweet cherry, young_leaves	ILLUMINA	12677132000 bp
SRR13686257	RNA-Seq of Prunus avium: fourth stage stem from Greece, sweet cherry, stem_4th_stage	ILLUMINA	12386094200 bp
SRR13686258	RNA-Seq of Prunus avium: third stage stem from Greece, sweet cherry, stem_3rd_stage	ILLUMINA	12603936400 bp
SRR13686259	RNA-Seq of Prunus avium: second stage stem from Greece, sweet cherry, stem_2nd_stage	ILLUMINA	12649328800 bp
SRR13686260	RNA-Seq of Prunus avium: first stage stem from Greece, sweet cherry, stem_1st_stage	ILLUMINA	12698453600 bp
SRR13686261	RNA-Seq of Prunus avium: first years shoot from Greece, sweet cherry, first_years_shoot	ILLUMINA	10300221200 bp
SRR13686262	RNA-Seq of Prunus avium: first bloom from Greece, sweet cherry, first_bloom	ILLUMINA	12768398800 bp

PRJNA701868

Sequence analysis of 21 Greeksweet cherry cultivars.

Library	Title	Platform	Total Base
SRR13710459	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Proimo_kolindrou, prkld	ILLUMINA	9944169292 bp
SRR13710460	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Mieza, mie	ILLUMINA	9940064726 bp
SRR13710461	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Lemonidi, lem	ILLUMINA	9929651148 bp
SRR13710462	RNA-Seq of Prunus avium: mature plant with leaves from Greece, hgxs30, hgxs30	ILLUMINA	9992800170 bp
SRR13710463	RNA-Seq of Prunus avium: mature plant with leaves from Greece, hgxs11, hgxs11	ILLUMINA	9911493714 bp
SRR13710464	RNA-Seq of Prunus avium: mature plant with leaves from Greece, gxt7, gxt7	ILLUMINA	9964356514 bp
SRR13710465	RNA-Seq of Prunus avium: mature plant with leaves from Greece, chiou, chi	ILLUMINA	10029026182 bp
SRR13710466	RNA-Seq of Prunus avium: mature plant with leaves from Greece, bxs21, bxs21	ILLUMINA	9906787100 bp
SRR13710467	RNA-Seq of Prunus avium: mature plant with leaves from Greece, bxs33, bxs33	ILLUMINA	9300352042 bp
SRR13710468	RNA-Seq of Prunus avium: mature plant with leaves from Greece, bxs14, bxs14	ILLUMINA	9948643490 bp
SRR13710469	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Bakirtzeika, bak	ILLUMINA	9955311580 bp
SRR13710470	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Wild, wild	ILLUMINA	9546478878 bp
SRR13710471	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Achaias, vas	ILLUMINA	10004681108 bp
SRR13710472	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Tsolakeika, tsol	ILLUMINA	9965309656 bp
SRR13710473	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Tragana_rodochoriou, trrd	ILLUMINA	10017080994 bp
SRR13710474	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Tragana_edessis_naousis, tredna	ILLUMINA	9987692962 bp
SRR13710475	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Tragana_edessis, tred	ILLUMINA	9970582196 bp
SRR13710476	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Samou, sam	ILLUMINA	9939082204 bp
SRR13710477	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Petrokeraso_tragano, ptrtrach	ILLUMINA	6081813638 bp
SRR13710478	RNA-Seq of Prunus avium: mature plant with leaves from Greece, bxs22, bxs22	ILLUMINA	9968639762 bp
SRR13710479	RNA-Seq of Prunus avium: mature plant with leaves from Greece, Agiorgitika_lalantiou, agld	ILLUMINA	9945975460 bp

PRJNA746102

The aim of the study is to find out key genes of sweet cherry quality formation.

Yang et al., 2021

Library	Title	Platform	Total Base
SRR15112546	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 4 repeat1, quality10, HZZ604A	ILLUMINA	6917311200 bp
SRR15112547	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 3 repeat3, quality9, HZZ528C	ILLUMINA	7352343600 bp
SRR15112548	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 3 repeat2, quality8, HZZ528B	ILLUMINA	7015885200 bp
SRR15112549	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 3 repeat1, quality7, HZZ528A	ILLUMINA	7397815500 bp
SRR15112550	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 2 repeat3, quality6, HZZ520C	ILLUMINA	7763892300 bp
SRR15112551	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 2 repeat2, quality5, HZZ520B	ILLUMINA	7791481200 bp
SRR15112552	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 2 repeat1, quality4, HZZ520A	ILLUMINA	7611819000 bp
SRR15112553	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 1 repeat3, quality3, HZZ505C	ILLUMINA	7818379800 bp
SRR15112554	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 4 repeat3, quality12, HZZ604C	ILLUMINA	7552241100 bp
SRR15112555	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 4 repeat2, quality11, HZZ604B	ILLUMINA	7325008500 bp
SRR15112556	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 1 repeat2, quality2, HZZ505B	ILLUMINA	8167741800 bp
SRR15112557	RNA-Seq of Prunus avium: flesh from China: Shandong, Black Pearl, flesh 1 repeat1, quality1, HZZ505A	ILLUMINA	7160009100 bp

PRJNA756935

A transcriptome comparison between two different sweet cherry genotypes at three different dormancy stages to identify candidate genes associated to dormancy control.

Branchereau et al., 2022

Library	Title	Platform	Total Base
SRR15564979	RNA-Seq of Prunus avium: endodormancy stage flower bud from France, Regina, Regina_Stage1_Rep1	ILLUMINA	3751146767 bp
SRR15564980	RNA-Seq of Prunus avium: ecodormancy stage flower bud from France, Garnet, Garnet_Stage3_Rep3	ILLUMINA	2311222491 bp
SRR15564981	RNA-Seq of Prunus avium: ecodormancy stage flower bud from France, Garnet, Garnet_Stage3_Rep2	ILLUMINA	2173790781 bp
SRR15564982	RNA-Seq of Prunus avium: ecodormancy stage flower bud from France, Garnet, Garnet_Stage3_Rep1	ILLUMINA	2281719785 bp
SRR15564983	RNA-Seq of Prunus avium: endodormancy release stage flower bud from France, Garnet, Garnet_Stage2_Rep3	ILLUMINA	2220856983 bp
SRR15564984	RNA-Seq of Prunus avium: endodormancy release stage flower bud from France, Garnet, Garnet_Stage2_Rep2	ILLUMINA	1922714881 bp
SRR15564985	RNA-Seq of Prunus avium: endodormancy release stage flower bud from France, Garnet, Garnet_Stage2_Rep1	ILLUMINA	2569310922 bp
SRR15564986	RNA-Seq of Prunus avium: endodormancy stage flower bud from France, Garnet, Garnet_Stage1_Rep3	ILLUMINA	2057701381 bp
SRR15564987	RNA-Seq of Prunus avium: ecodormancy stage flower bud from France, Regina, Regina_Stage3_Rep3	ILLUMINA	5187345860 bp
SRR15564988	RNA-Seq of Prunus avium: ecodormancy stage flower bud from France, Regina, Regina_Stage3_Rep2	ILLUMINA	3768893275 bp
SRR15564989	RNA-Seq of Prunus avium: ecodormancy stage flower bud from France, Regina, Regina_Stage3_Rep1	ILLUMINA	1732395127 bp
SRR15564990	RNA-Seq of Prunus avium: endodormancy release stage flower bud from France, Regina, Regina_Stage2_Rep3	ILLUMINA	3039231602 bp
SRR15564991	RNA-Seq of Prunus avium: endodormancy release stage flower bud from France, Regina, Regina_Stage2_Rep2	ILLUMINA	4881369794 bp
SRR15564992	RNA-Seq of Prunus avium: endodormancy release stage flower bud from France, Regina, Regina_Stage2_Rep1	ILLUMINA	3487294872 bp
SRR15564993	RNA-Seq of Prunus avium: endodormancy stage flower bud from France, Regina, Regina_Stage1_Rep3	ILLUMINA	2540867807 bp
SRR15564994	RNA-Seq of Prunus avium: endodormancy stage flower bud from France, Regina, Regina_Stage1_Rep2	ILLUMINA	3190128430 bp
SRR15564995	RNA-Seq of Prunus avium: endodormancy stage flower bud from France, Garnet, Garnet_Stage1_Rep2	ILLUMINA	2211119674 bp
SRR15564996	RNA-Seq of Prunus avium: endodormancy stage flower bud from France, Garnet, Garnet_Stage1_Rep1	ILLUMINA	3427268148 bp

PRJNA761531

Sweet cherry fruit anthocyanin regulation.

Library	Title	Platform	Total Base
SRR15860004	RNA-Seq of Prunus avium: young fruit from China: Yantai, Bao6, YP5_1	ILLUMINA	6511743300 bp
SRR15860005	RNA-Seq of Prunus avium: young fruit from China: Yantai, Tieton, RP5_3	ILLUMINA	6740705700 bp
SRR15860006	RNA-Seq of Prunus avium: young fruit from China: Yantai, Tieton, RP5_2	ILLUMINA	6707787900 bp
SRR15860007	RNA-Seq of Prunus avium: young fruit from China: Yantai, Tieton, RP5_1	ILLUMINA	6490220400 bp
SRR15860008	RNA-Seq of Prunus avium: young fruit from China: Yantai, Bao6, YP4_3	ILLUMINA	6000188700 bp
SRR15860009	RNA-Seq of Prunus avium: young fruit from China: Yantai, Bao6, YP4_2	ILLUMINA	6584874600 bp
SRR15860010	RNA-Seq of Prunus avium: young fruit from China: Yantai, Bao6, YP4_1	ILLUMINA	6526971300 bp
SRR15860011	RNA-Seq of Prunus avium: young fruit from China: Yantai, Tieton, RP4_3	ILLUMINA	6733269600 bp
SRR15860012	RNA-Seq of Prunus avium: young fruit from China: Yantai, Bao6, YP5_3	ILLUMINA	7150676400 bp
SRR15860013	RNA-Seq of Prunus avium: young fruit from China: Yantai, Bao6, YP5_2	ILLUMINA	6793437900 bp
SRR15860014	RNA-Seq of Prunus avium: young fruit from China: Yantai, Tieton, RP4_2	ILLUMINA	6727271100 bp
SRR15860015	RNA-Seq of Prunus avium: young fruit from China: Yantai, Tieton, RP4_1	ILLUMINA	6054701100 bp

PRJNA814738

RNA-seq of sweet cherry fruit at different developmental stages provides important candidate genes that involved in fruit ripening.

Zhai et al., 2022

Library	Title	Platform	Total Base
SRR18306015	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ3_2_S74	ILLUMINA	7776604190 bp
SRR18306018	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ2_2_S71	ILLUMINA	8866559940 bp
SRR18306019	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ2_1_S70	ILLUMINA	8190134602 bp
SRR18306020	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ1_3_S69	ILLUMINA	8709560710 bp
SRR18306023	RNA-Seq of Prunus avium: fruit from China: Beijing, YM3_1_S64	ILLUMINA	8671013128 bp
SRR18306026	RNA-Seq of Prunus avium: fruit from China: Beijing, YM2_1_S61	ILLUMINA	7742687778 bp
SRR18306030	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ1_1_S67	ILLUMINA	8289720008 bp
SRR18306013	RNA-Seq of Prunus avium: fruit from China: Beijing, YM1_1_S58	ILLUMINA	7514914848 bp
SRR18306014	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ3_3_S75	ILLUMINA	8511564980 bp
SRR18306016	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ3_1_S73	ILLUMINA	9364318454 bp
SRR18306017	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ2_3_S72	ILLUMINA	8605945718 bp
SRR18306021	RNA-Seq of Prunus avium: fruit from China: Beijing, YM3_3_S66	ILLUMINA	8723614582 bp
SRR18306022	RNA-Seq of Prunus avium: fruit from China: Beijing, YM3_2_S65	ILLUMINA	8507236414 bp
SRR18306024	RNA-Seq of Prunus avium: fruit from China: Beijing, YM2_3_S63	ILLUMINA	8243167916 bp
SRR18306025	RNA-Seq of Prunus avium: fruit from China: Beijing, YM2_2_S62	ILLUMINA	8003425518 bp
SRR18306027	RNA-Seq of Prunus avium: fruit from China: Beijing, YM1_3_S60	ILLUMINA	9206222964 bp
SRR18306028	RNA-Seq of Prunus avium: fruit from China: Beijing, YM1_2_S59	ILLUMINA	8747257558 bp
SRR18306029	RNA-Seq of Prunus avium: fruit from China: Beijing, RZ1_2_S68	ILLUMINA	8921807820 bp

PRJNA824997

Conjoint Assessment of Metabolome and Transcriptome Unveils Candidate Genes and Metabolites Engaged in Flavonoid Biosynthesis in Sweet Cherry (Prunus avium L.) in the Processes of Fruit Development and Ripening.

Fu et al., 2022

Library	Title	Platform	Total Base
SRR18693369	RNA-Seq of Prunus avium: 15 years ripening plant with fruit from China, Hongmanao, C2_3	ILLUMINA	5511925422 bp
SRR18693370	RNA-Seq of Prunus avium: 15 years ripening plant with fruit from China, Hongmanao, C2_2	ILLUMINA	5677191383 bp
SRR18693371	RNA-Seq of Prunus avium: 15 years ripening plant with fruit from China, Hongmanao, C2_1	ILLUMINA	5654962913 bp
SRR18693372	RNA-Seq of Prunus avium: 15 years fruit development plant with fruit from China, Hongmanao, C1_3	ILLUMINA	5380065302 bp
SRR18693373	RNA-Seq of Prunus avium: 15 years fruit development plant with fruit from China, Hongmanao, C1_2	ILLUMINA	5811368000 bp
SRR18693374	RNA-Seq of Prunus avium: 15 years fruit development plant with fruit from China, Hongmanao, C1_1	ILLUMINA	5879588567 bp

PRJNA898489

Effects of Abscisic Acid treatment in the development of Sweet Cherry fruits.

Library	Title	Platform	Total Base
SRR22198150	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT11 biological replicate 1	ILLUMINA	4516228938 bp
SRR22198151	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT4 biological replicate 3	ILLUMINA	5858643774 bp
SRR22198152	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT4 biological replicate 2		6093179106 bp
SRR22198153	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT4 biological replicate 1	ILLUMINA	5196553626 bp
SRR22198154	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT2h biological replicate 3	ILLUMINA	4409268524 bp
SRR22198155	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT2h biological replicate 1	ILLUMINA	4267277472 bp
SRR22198156	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT11 biological replicate 3	ILLUMINA	5584805504 bp
SRR22198157	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT0 biological replicate 3	ILLUMINA	4197814520 bp
SRR22198158	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT2h biological replicate 2	ILLUMINA	4382467366 bp
SRR22198159	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT11 biological replicate 2	ILLUMINA	5050421978 bp
SRR22198160	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT11 biological replicate 1	ILLUMINA	4670159604 bp
SRR22198161	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT4 biological replicate 3		5414835634 bp
SRR22198162	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT4 biological replicate 2	ILLUMINA	4549800530 bp
SRR22198163	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT2h biological replicate 3	ILLUMINA	5158403502 bp
SRR22198164	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT2h biological replicate 2	ILLUMINA	4435164924 bp
SRR22198165	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT2h biological replicate 1	ILLUMINA	5760209174 bp
SRR22198166	RNA-Seq of Prunus avium: adult ABA treatment plant with fruit from Chile: Rengo, Lapins, LPT4 biological replicate 1	ILLUMINA	4283904900 bp
SRR22198167	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT11 biological replicate 3	ILLUMINA	4811011982 bp
SRR22198168	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT11 biological replicate 2	ILLUMINA	4846615694 bp
SRR22198169	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT0 biological replicate 2	ILLUMINA	5501443942 bp
SRR22198170	RNA-Seq of Prunus avium: adult control plant with fruit from Chile: Rengo, Lapins, LCT0 biological replicate 1	ILLUMINA	4390154274 bp

PRJNA905870

Researchers profiled the anthocyanin and carotenoid metabolites by LC-MS/MS and transcriptome analysis by RNA-seq, to investigate the most different pigments and the underlying regulatory mechanisms of differential expression genes (DEGs) between red and yellow fruits of sweet cherry.

Wang et al., 2023

Library	Title	Platform	Total Base
SRR22430798	RNA-Seq of Prunus avium: wild stage4 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 1', CY4A	BGISEQ	6413447400 bp
SRR22430799	RNA-Seq of Prunus avium: wild stage3 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 3', CY3C	BGISEQ	6427060200 bp
SRR22430800	RNA-Seq of Prunus avium: wild stage3 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 2', CY3B	BGISEQ	6518771700 bp
SRR22430801	RNA-Seq of Prunus avium: wild stage3 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 1', CY3A	BGISEQ	6337186500 bp
SRR22430802	RNA-Seq of Prunus avium: wild stage2 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 3', CY2C	BGISEQ	6351218700 bp
SRR22430803	RNA-Seq of Prunus avium: wild stage2 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 2', CY2B	BGISEQ	6431029500 bp
SRR22430804	RNA-Seq of Prunus avium: wild stage2 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 1', CY2A	BGISEQ	6531511500 bp
SRR22430805	RNA-Seq of Prunus avium: wild stage4 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 3', JNH4C	BGISEQ	6369671700 bp
SRR22430806	RNA-Seq of Prunus avium: wild stage4 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 2', JNH4B	BGISEQ	6313528200 bp
SRR22430807	RNA-Seq of Prunus avium: wild stage4 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 1', JNH4A	BGISEQ	6482601600 bp
SRR22430808	RNA-Seq of Prunus avium: wild stage3 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 3', JNH3C	BGISEQ	6308679900 bp
SRR22430809	RNA-Seq of Prunus avium: wild stage1 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 3', CY1C	BGISEQ	6381638400 bp
SRR22430810	RNA-Seq of Prunus avium: wild stage3 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 2', JNH3B	BGISEQ	6333839400 bp
SRR22430811	RNA-Seq of Prunus avium: wild stage3 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 1', JNH3A	BGISEQ	6412355100 bp
SRR22430812	RNA-Seq of Prunus avium: wild stage2 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 3', JNH2C	BGISEQ	6398277000 bp
SRR22430813	RNA-Seq of Prunus avium: wild stage2 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 2', JNH2B	BGISEQ	6418570800 bp
SRR22430814	RNA-Seq of Prunus avium: wild stage2 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 1', JNH2A	BGISEQ	6321706200 bp
SRR22430815	RNA-Seq of Prunus avium: wild stage1 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 3', JNH1C	BGISEQ	6429666600 bp
SRR22430816	RNA-Seq of Prunus avium: wild stage1 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 2', JNH1B	BGISEQ	6407930100 bp
SRR22430817	RNA-Seq of Prunus avium: wild stage1 plant with fruit from China, Red Sweet cherry, replicate = biological replicate 1', JNH1A	BGISEQ	6361220400 bp
SRR22430818	RNA-Seq of Prunus avium: wild stage4 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 3', CY4C	BGISEQ	6370943400 bp
SRR22430819	RNA-Seq of Prunus avium: wild stage4 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 2', CY4B	BGISEQ	6440823600 bp
SRR22430820	RNA-Seq of Prunus avium: wild stage1 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 2', CY1B	BGISEQ	6389299500 bp
SRR22430821	RNA-Seq of Prunus avium: wild stage1 plant with fruit from China, Yellow Sweet cherry, replicate = biological replicate 1', CY1A	BGISEQ	6362810100 bp

PRJNA905895

Expression levels of genes involved in dormancy stages of sweet cherry flower buds.

Library	Title	Platform	Total Base
SRR22425247	RNA-Seq of Prunus avium: dormancy release stage flower bud from China: Shanghai, Royal Lee, T14d	ILLUMINA	17420279529 bp
SRR22425248	RNA-Seq of Prunus avium: endo-dormancy stage flower bud from China: Shanghai, Royal Lee, T400h	ILLUMINA	19505381588 bp
SRR22425249	RNA-Seq of Prunus avium: para-dormancy stage flower bud from China: Shanghai, Royal Lee, T0h	ILLUMINA	19734306612 bp

PRJNA911149

Sweet cherry flower buds stages of para-dormancy, endo-dormancy, and dormancy release.

Library	Title	Platform	Total Base
SRR22681754	RNA-Seq of Prunus avium: dormancy release stage flower bud from China: Shanghai, RoyalLee, Pav_T14d	ILLUMINA	6482480962 bp
SRR22681755	RNA-Seq of Prunus avium: endo-dormancy stage flower bud from China: Shanghai, RoyalLee, Pav_T400h	ILLUMINA	7095853698 bp
SRR22681756	RNA-Seq of Prunus avium: para-dormancy stage flower bud from China: Shanghai, RoyalLee, Pav_T0h	ILLUMINA	6752887318 bp

PRJNA945231

Researchers examined the physiology of the impact of pre-flowering boron application on the initial set and early fruit growth coupled with a transcriptome and metabolomic analysis using the sweet cherry as an experimental model, which yields insight into the metabolic network associated with boron nutrition in fruit biology.

Library	Title	Platform	Total Base
SRR23875786	RNA-Seq of Prunus avium: S1 stage control treatment fruit, Skeena, replicate 2, MCB_2	ILLUMINA	6514458300 bp
SRR23875787	RNA-Seq of Prunus avium: S1 stage control treatment fruit, Skeena, replicate 1, MCB_1	ILLUMINA	6349382100 bp
SRR23875776	RNA-Seq of Prunus avium: S2 stage boric acid treatment fruit, Skeena, replicate 1, MCB_10	ILLUMINA	6375756300 bp
SRR23875777	RNA-Seq of Prunus avium: S2 stage control treatment fruit, Skeena, replicate 3, MCB_9	ILLUMINA	6061194000 bp
SRR23875778	RNA-Seq of Prunus avium: S2 stage control treatment fruit, Skeena, replicate 2, MCB_8	ILLUMINA	6358873500 bp
SRR23875779	RNA-Seq of Prunus avium: S2 stage control treatment fruit, Skeena, replicate 1, MCB_7	ILLUMINA	6065493300 bp
SRR23875780	RNA-Seq of Prunus avium: S1 stage boric acid treatment fruit, Skeena, replicate 3, MCB_6	ILLUMINA	6300516600 bp
SRR23875781	RNA-Seq of Prunus avium: S1 stage boric acid treatment fruit, Skeena, replicate 2, MCB_5	ILLUMINA	6636097200 bp
SRR23875782	RNA-Seq of Prunus avium: S1 stage boric acid treatment fruit, Skeena, replicate 1, MCB_4	ILLUMINA	6399914700 bp
SRR23875783	RNA-Seq of Prunus avium: S1 stage control treatment fruit, Skeena, replicate 3, MCB_3	ILLUMINA	5970746700 bp
SRR23875784	RNA-Seq of Prunus avium: S2 stage boric acid treatment fruit, Skeena, replicate 3, MCB_12	ILLUMINA	6010658700 bp
SRR23875785	RNA-Seq of Prunus avium: S2 stage boric acid treatment fruit, Skeena, replicate 2, MCB_11	ILLUMINA	6047723700 bp

PRJNA954419

In order to better understand the molecular mechanisms involved in the regulation of dormancy, researchers conducted a transcriptomic analysis of flower buds from the late flowering sweet cherry cultivar 'Fertard' during dormancy, from October 2017 to March 2018.

Library	Title	Platform	Total Base
SRR24135968	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163422	ILLUMINA	1597791600 bp
SRR24135970	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163427	ILLUMINA	1002955800 bp
SRR24135973	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163426	ILLUMINA	1066233000 bp
SRR24135976	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163425	ILLUMINA	1163775900 bp
SRR24135979	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163424	ILLUMINA	1009946700 bp
SRR24135982	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163423	ILLUMINA	1219185300 bp
SRR24135985	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163421	ILLUMINA	1109262000 bp
SRR24135988	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163420	ILLUMINA	2038551900 bp
SRR24135991	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163419	ILLUMINA	1548383100 bp
SRR24135994	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163418	ILLUMINA	1134176400 bp
SRR24135997	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163417	ILLUMINA	1321954200 bp
SRR24136000	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163416	ILLUMINA	1578714900 bp
SRR24136003	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163415	ILLUMINA	1071712500 bp
SRR24136006	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163414	ILLUMINA	1049455800 bp
SRR24136009	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163413	ILLUMINA	1625396100 bp
SRR24136012	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163412	ILLUMINA	1373880600 bp
SRR24136015	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163411	ILLUMINA	1544250000 bp
SRR24136018	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163410	ILLUMINA	1041918300 bp
SRR24135969	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163422	ILLUMINA	2012833500 bp
SRR24135971	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163427	ILLUMINA	1490692500 bp
SRR24135972	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163427	ILLUMINA	1218001800 bp
SRR24135974	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163426	ILLUMINA	1567704000 bp
SRR24135975	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163426	ILLUMINA	1356177600 bp
SRR24135977	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163425	ILLUMINA	1723098600 bp
SRR24135978	RNA-Seq of Prunus avium: sampled from 3/12/2018 flower bud, Fertard, GSM7163425	ILLUMINA	1438624200 bp
SRR24135980	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163424	ILLUMINA	1490996700 bp
SRR24135981	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163424	ILLUMINA	1226994000 bp
SRR24135983	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163423	ILLUMINA	1801099200 bp
SRR24135984	RNA-Seq of Prunus avium: sampled from 2/12/2018 flower bud, Fertard, GSM7163423	ILLUMINA	1502752800 bp
SRR24135986	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163421	ILLUMINA	1686732000 bp
SRR24135987	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163421	ILLUMINA	1382757000 bp
SRR24135989	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163420	ILLUMINA	3048699300 bp
SRR24135990	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163420	ILLUMINA	2591498400 bp
SRR24135992	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163419	ILLUMINA	2317174200 bp
SRR24135993	RNA-Seq of Prunus avium: sampled from 1/15/2018 flower bud, Fertard, GSM7163419	ILLUMINA	1898710500 bp
SRR24135995	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163418	ILLUMINA	1670154300 bp
SRR24135996	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163418	ILLUMINA	1434992100 bp
SRR24135998	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163417	ILLUMINA	1945824900 bp
SRR24135999	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163417	ILLUMINA	1634538000 bp
SRR24136001	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163416	ILLUMINA	2282209800 bp
SRR24136002	RNA-Seq of Prunus avium: sampled from 1/3/2018 flower bud, Fertard, GSM7163416	ILLUMINA	1992889800 bp
SRR24136004	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163415	ILLUMINA	1624749000 bp
SRR24136005	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163415	ILLUMINA	1248350700 bp
SRR24136007	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163414	ILLUMINA	1537785600 bp
SRR24136008	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163414	ILLUMINA	1324851000 bp
SRR24136010	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163413	ILLUMINA	2417586300 bp
SRR24136011	RNA-Seq of Prunus avium: sampled from 12/17/2012 flower bud, Fertard, GSM7163413	ILLUMINA	1979897700 bp
SRR24136013	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163412	ILLUMINA	2052840600 bp
SRR24136014	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163412	ILLUMINA	1778803200 bp
SRR24136016	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163411	ILLUMINA	2231241900 bp
SRR24136017	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163411	ILLUMINA	1920455700 bp
SRR24136019	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163410	ILLUMINA	1558975500 bp
SRR24136020	RNA-Seq of Prunus avium: sampled from 10/17/2017 flower bud, Fertard, GSM7163410	ILLUMINA	1271760600 bp

Species Info.

Omics Data

Omics Analysis

Seq. Analysis

Omics Analysis

Others

Project