Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA384502 Pinus sylvestris pollen transcriptome Höllbacher et al., 2017
1
Library Title Platform Total Base VCF File
SRR5486222 RNA-Seq of Pinus sylvestris: mature pollen, Pinus Pollen ILLUMINA 62686711945 bp
PRJNA631777 Transcriptome of wounding response in young Pinus sylvestris stems Lim et al., 2021
16
Library Title Platform Total Base VCF File
SRR11791362 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 3 hours after wounding treatment from Finland: Leppavirta, T426-WND-3H ABI_SOLID 2996981425 bp
SRR11791363 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with Control treatment from Finland: Leppavirta, T426-WND-0H ABI_SOLID 3451602565 bp
SRR11791364 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 96 hours after wounding treatment from Finland: Leppavirta, T413-WND-4D ABI_SOLID 6236312980 bp
SRR11791365 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 24 hours after wounding treatment from Finland: Leppavirta, T413-WND-1D ABI_SOLID 7136523585 bp
SRR11791366 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 3 hours after wounding treatment from Finland: Leppavirta, T413-WND-3H ABI_SOLID 5148879165 bp
SRR11791367 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with Control treatment from Finland: Leppavirta, T413-WND-0H ABI_SOLID 4849290290 bp
SRR11791368 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 96 hours after wounding treatment from Finland: Leppavirta, T395-WND-4D ABI_SOLID 4854040260 bp
SRR11791369 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 24 hours after wounding treatment from Finland: Leppavirta, T395-WND-1D ABI_SOLID 6460443615 bp
SRR11791370 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 96 hours after wounding treatment from Finland: Leppavirta, T547-WND-4D ABI_SOLID 10702937180 bp
SRR11791371 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 24 hours after wounding treatment from Finland: Leppavirta, T547-WND-1D ABI_SOLID 3397195765 bp
SRR11791372 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 3 hours after wounding treatment from Finland: Leppavirta, T547-WND-3H ABI_SOLID 4416212485 bp
SRR11791373 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with Control treatment from Finland: Leppavirta, T547-WND-0H ABI_SOLID 3133451900 bp
SRR11791374 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 96 hours after wounding treatment from Finland: Leppavirta, T426-WND-4D ABI_SOLID 3522435785 bp
SRR11791375 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 24 hours after wounding treatment from Finland: Leppavirta, T426-WND-1D ABI_SOLID 4004266870 bp
SRR11791376 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with 3 hours after wounding treatment from Finland: Leppavirta, T395-WND-3H ABI_SOLID 4539438515 bp
SRR11791377 RNA-Seq of Pinus sylvestris: 5 yearsplant with stem with Control treatment from Finland: Leppavirta, T395-WND-0H ABI_SOLID 4514708870 bp
PRJNA635551 UV response in Scots pine needles of 6 week old seedlings Paasela et al., 2023
24
Library Title Platform Total Base VCF File
SRR11862645 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 2 hours after UV-C treatment treatment from Finland: Leppavirta, L89-UVC-2H ABI_SOLID 729330580 bp
SRR11862646 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with Control treatment from Finland: Leppavirta, L89-UVC-0H ABI_SOLID 766451830 bp
SRR11862647 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 24 hours after UV-C treatment treatment from Finland: Leppavirta, H473-UVC-24H ABI_SOLID 716620055 bp
SRR11862648 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 6 hours after UV-C treatment treatment from Finland: Leppavirta, H473-UVC-6H ABI_SOLID 762423450 bp
SRR11862649 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 2 hours after UV-C treatment treatment from Finland: Leppavirta, H473-UVC-2H ABI_SOLID 687619785 bp
SRR11862650 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with Control treatment from Finland: Leppavirta, H473-UVC-0H ABI_SOLID 791369570 bp
SRR11862651 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 24 hours after UV-C treatment treatment from Finland: Leppavirta, H434-UVC-24H ABI_SOLID 618783260 bp
SRR11862652 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 24 hours after CHX treatment treatment from Finland: Leppavirta, L392-CHX-24H ABI_SOLID 1221302830 bp
SRR11862653 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 8 hours after CHX treatment treatment from Finland: Leppavirta, L392-CHX-8H ABI_SOLID 1236758050 bp
SRR11862654 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 2 hours after CHX treatment treatment from Finland: Leppavirta, L392-CHX-2H ABI_SOLID 1030155610 bp
SRR11862655 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with Control treatment from Finland: Leppavirta, L392-CHX-0H ABI_SOLID 994848360 bp
SRR11862656 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 6 hours after UV-C treatment treatment from Finland: Leppavirta, H434-UVC-6H ABI_SOLID 523252590 bp
SRR11862657 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 24 hours after CHX treatment treatment from Finland: Leppavirta, H432-CHX-24H ABI_SOLID 1410060300 bp
SRR11862658 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 8 hours after CHX treatment treatment from Finland: Leppavirta, H432-CHX-8H ABI_SOLID 1092097820 bp
SRR11862659 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 2 hours after CHX treatment treatment from Finland: Leppavirta, H432-CHX-2H ABI_SOLID 1140019320 bp
SRR11862660 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with Control treatment from Finland: Leppavirta, H432-CHX-0H ABI_SOLID 1226147450 bp
SRR11862661 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 24 hours after UV-C treatment treatment from Finland: Leppavirta, L170-UVC-24H ABI_SOLID 705387255 bp
SRR11862662 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 6 hours after UV-C treatment treatment from Finland: Leppavirta, L170-UVC-6H ABI_SOLID 726299320 bp
SRR11862663 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 2 hours after UV-C treatment treatment from Finland: Leppavirta, L170-UVC-2H ABI_SOLID 763647905 bp
SRR11862664 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with Control treatment from Finland: Leppavirta, L170-UVC-0H ABI_SOLID 760566010 bp
SRR11862665 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 24 hours after UV-C treatment treatment from Finland: Leppavirta, L89-UVC-24H ABI_SOLID 731717930 bp
SRR11862666 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 6 hours after UV-C treatment treatment from Finland: Leppavirta, L89-UVC-6H ABI_SOLID 770310255 bp
SRR11862667 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with 2 hours after UV-C treatment treatment from Finland: Leppavirta, H434-UVC-2H ABI_SOLID 777628865 bp
SRR11862668 RNA-Seq of Pinus sylvestris: 6 weekplant with needles with Control treatment from Finland: Leppavirta, H434-UVC-0H ABI_SOLID 592786225 bp
PRJNA703422 Transcriptomes of Pinus sylvestris Jin et al., 2021
2
Library Title Platform Total Base VCF File
SRR13823420 RNA-Seq of Pinus sylvestris: megagametophytes from France, Pinus_sylvestris_W294 ILLUMINA 8159374320 bp
SRR13823421 RNA-Seq of Pinus sylvestris: megagametophytes from United Kingdom, Pinus_sylvestris_W188 ILLUMINA 7062336216 bp
PRJNA795839 Pinus sylvestris var. mongolica Raw sequence reads -
18
Library Title Platform Total Base VCF File
SRR17542248 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 6857756808 bp
SRR17542249 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 8306154848 bp
SRR17542250 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 7609471048 bp
SRR17542251 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 7173355264 bp
SRR17542252 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 8056281860 bp
SRR17542253 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 7324393316 bp
SRR17542254 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 7168564638 bp
SRR17542255 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 6639317792 bp
SRR17542256 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_CK ILLUMINA 7935001076 bp
SRR17579115 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7933293568 bp
SRR17579116 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7404379828 bp
SRR17579117 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7176764844 bp
SRR17579118 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7000406810 bp
SRR17579119 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 6807002688 bp
SRR17579120 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7107968036 bp
SRR17579121 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7087565520 bp
SRR17579122 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 6833013344 bp
SRR17579123 RNA-Seq of Pinus sylvestris var. mongolica: 10 years plant with needle under drought treatment from China: Inner Mongolia, Z_Wounding ILLUMINA 7108164940 bp
PRJNA989562 RNA-seq clean data under drought treatment in Pinus sylvestris var. mongolica -
18
Library Title Platform Total Base VCF File
SRR25109194 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 11435118600 bp
SRR25109195 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9146095200 bp
SRR25109196 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9922921500 bp
SRR25109197 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 6782349300 bp
SRR25109198 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 7370409600 bp
SRR25109199 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9879064800 bp
SRR25109200 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9364063500 bp
SRR25109201 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 8754183000 bp
SRR25109202 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 8388252600 bp
SRR25109203 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 7789694100 bp
SRR25109204 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 7929093900 bp
SRR25109205 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9566854500 bp
SRR25109206 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 10196085300 bp
SRR25109207 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9235286700 bp
SRR25109208 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 10987527000 bp
SRR25109209 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9071942700 bp
SRR25109210 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 6986298300 bp
SRR25109211 RNA-Seq of Pinus sylvestris var. mongolica: 2 month plant with needle from China: Beijing, Pinus sylvestris var. mongolica, The needle under drought treatment DNBSEQ 9833398200 bp

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