Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA1052697 To investigate the genes and the regulatory elements involved in the biosynthesis of phenolic compound in Japanese plum fruits, we compared the RNA-seq data of two cultivars (Angeleno and 98-99) with contrasting phenolic profiles in two developmental stages (stone hardening and ripe fruit). -
12
Library Title Platform Total Base VCF File
SRR27282270 RNA-Seq of Prunus salicina: ripe fruit (s4) stage plant with fruit from Chile: Melipilla, Angeleno, Ang_S4_R1 ILLUMINA 11282945292 bp
SRR27282271 RNA-Seq of Prunus salicina: stone hardening (s1) stage plant with fruit from Chile: Melipilla, Angeleno, Ang_S1_R3 ILLUMINA 11948717882 bp
SRR27282272 RNA-Seq of Prunus salicina: stone hardening (s1) stage plant with fruit from Chile: Melipilla, Angeleno, Ang_S1_R2 ILLUMINA 11342613546 bp
SRR27282273 RNA-Seq of Prunus salicina: stone hardening (s1) stage plant with fruit from Chile: Melipilla, Angeleno, Ang_S1_R1 ILLUMINA 11432673872 bp
SRR27282274 RNA-Seq of Prunus salicina: ripe fruit (s4) stage plant with fruit from Chile: Maipu, 98-99, 98_S4_R3 ILLUMINA 11063571284 bp
SRR27282275 RNA-Seq of Prunus salicina: ripe fruit (s4) stage plant with fruit from Chile: Maipu, 98-99, 98_S4_R2 ILLUMINA 13057858484 bp
SRR27282276 RNA-Seq of Prunus salicina: ripe fruit (s4) stage plant with fruit from Chile: Maipu, 98-99, 98_S4_R1 ILLUMINA 13057882342 bp
SRR27282277 RNA-Seq of Prunus salicina: stone hardening (s1) stage plant with fruit from Chile: Maipu, 98-99, 98_S1_R3 ILLUMINA 11822368330 bp
SRR27282278 RNA-Seq of Prunus salicina: ripe fruit (s4) stage plant with fruit from Chile: Melipilla, Angeleno, Ang_S4_R3 ILLUMINA 10896449316 bp
SRR27282279 RNA-Seq of Prunus salicina: ripe fruit (s4) stage plant with fruit from Chile: Melipilla, Angeleno, Ang_S4_R2 ILLUMINA 11519627826 bp
SRR27282280 RNA-Seq of Prunus salicina: stone hardening (s1) stage plant with fruit from Chile: Maipu, 98-99, 98_S1_R2 ILLUMINA 11859658988 bp
SRR27282281 RNA-Seq of Prunus salicina: stone hardening (s1) stage plant with fruit from Chile: Maipu, 98-99, 98_S1_R1 ILLUMINA 11237869376 bp
PRJNA384370 We investigated mechanisms associated with sugar metabolism in two Japanese plum (Prunus salicina Lindl.) cultivars, the climacteric Santa Rosa and the non-climacteric Sweet Miriam. -
12
Library Title Platform Total Base VCF File
SRR5504030 RNA-Seq of Prunus salicina: stage 4 (fully-ripe) plant with flesh from USA: California, Santa Rosa, PS_SR_S4_R3 ILLUMINA 5392329400 bp
SRR5504031 RNA-Seq of Prunus salicina: stage 4 (fully-ripe) plant with flesh from USA: California, Santa Rosa, PS_SR_S4_R2 ILLUMINA 4429640000 bp
SRR5504032 RNA-Seq of Prunus salicina: stage 4 (fully-ripe) plant with flesh from USA: California, Santa Rosa, PS_SR_S4_R1 ILLUMINA 4395914600 bp
SRR5504033 RNA-Seq of Prunus salicina: stage 2 (pit hardening) plant with flesh from USA: California, Santa Rosa, PS_SR_S2_R3 ILLUMINA 4465274000 bp
SRR5504034 RNA-Seq of Prunus salicina: stage 2 (pit hardening) plant with flesh from USA: California, Santa Rosa, PS_SR_S2_R2 ILLUMINA 4549719600 bp
SRR5504035 RNA-Seq of Prunus salicina: stage 2 (pit hardening) plant with flesh from USA: California, Santa Rosa, PS_SR_S2_R1 ILLUMINA 4636964000 bp
SRR5504036 RNA-Seq of Prunus salicina: stage 4 (fully-ripe) plant with flesh from USA: California, Sweet Miriam, PS_SM_S4_R3 ILLUMINA 4086700600 bp
SRR5504037 RNA-Seq of Prunus salicina: stage 4 (fully-ripe) plant with flesh from USA: California, Sweet Miriam, PS_SM_S4_R2 ILLUMINA 3681382600 bp
SRR5504038 RNA-Seq of Prunus salicina: stage 4 (fully-ripe) plant with flesh from USA: California, Sweet Miriam, PS_SM_S4_R1 ILLUMINA 4247578400 bp
SRR5504039 RNA-Seq of Prunus salicina: s2 plant with flesh from USA: California, Sweet Miriam, PS_SM_S2_R3 ILLUMINA 4229474000 bp
SRR5504040 RNA-Seq of Prunus salicina: s2 plant with flesh from USA: California, Sweet Miriam, PS_SM_S2_R2 ILLUMINA 4307959000 bp
SRR5504041 RNA-Seq of Prunus salicina: s2 plant with flesh from USA: California, Sweet Miriam, PS_SM_S2_R1 ILLUMINA 4216079200 bp
PRJNA576011 Transcriptome data for the different tissues of Prunus sacilina cv Sanyueli -
6
Library Title Platform Total Base VCF File
SRR10235674 RNA-Seq of Prunus salicina: 5 years plant with matured fruit from China: Guangdong , Sanyueli, FRAS190035285-1a ILLUMINA 7500363000 bp
SRR10235675 RNA-Seq of Prunus salicina: 5 years plant with young fruit pulp from China: Guangdong , Sanyueli, FRAS190035284-1a ILLUMINA 7397691000 bp
SRR10235676 RNA-Seq of Prunus salicina: 5 years plant with young fruit pericarp from China: Guangdong , Sanyueli, FRAS190035283-1a ILLUMINA 8671776600 bp
SRR10235677 RNA-Seq of Prunus salicina: 5 years plant with branch from China: Guangdong , Sanyueli, FRAS190035281-1a ILLUMINA 7754837700 bp
SRR10235678 RNA-Seq of Prunus salicina: 5 years plant with flower from China: Guangdong , Sanyueli, FRAS190035280-1a ILLUMINA 7205596200 bp
SRR10235679 RNA-Seq of Prunus salicina: 5 years plant with leaf from China: Guangdong , Sanyueli, FRAS190035282-1a ILLUMINA 8183934900 bp
PRJNA645255 To investigate the molecular processes and genes involved in the regulation of flower bud dormancy, we compared the RNA-seq data derived from flower buds of 'Sanyueli' plum (low-chill) and 'Furongli' plum (high-chill) during chilling treatment. -
18
Library Title Platform Total Base VCF File
SRR12234088 RNA-Seq of Prunus salicina: dormant stage 0h after low temperature treatment plant with flower bud from China, Sanyueli, S1-1 ILLUMINA 9016464552 bp
SRR12234089 RNA-Seq of Prunus salicina: dormant stage 530h after low temperature treatment plant with flower bud from China, Furongli, F3-3 ILLUMINA 9638595732 bp
SRR12234090 RNA-Seq of Prunus salicina: dormant stage 530h after low temperature treatment plant with flower bud from China, Furongli, F3-2 ILLUMINA 10313859732 bp
SRR12234091 RNA-Seq of Prunus salicina: dormant stage 530h after low temperature treatment plant with flower bud from China, Furongli, F3-1 ILLUMINA 9436455514 bp
SRR12234092 RNA-Seq of Prunus salicina: dormant stage 290h after low temperature treatment plant with flower bud from China, Furongli, F2-3 ILLUMINA 6601611796 bp
SRR12234093 RNA-Seq of Prunus salicina: dormant stage 290h after low temperature treatment plant with flower bud from China, Furongli, F2-2 ILLUMINA 6786443274 bp
SRR12234094 RNA-Seq of Prunus salicina: dormant stage 290h after low temperature treatment plant with flower bud from China, Furongli, F2-1 ILLUMINA 7347842438 bp
SRR12234095 RNA-Seq of Prunus salicina: dormant stage 0h after low temperature treatment plant with flower bud from China, Furongli, F1-3 ILLUMINA 7232624308 bp
SRR12234096 RNA-Seq of Prunus salicina: dormant stage 450h after low temperature treatment plant with flower bud from China, Sanyueli, S3-3 ILLUMINA 9154574926 bp
SRR12234097 RNA-Seq of Prunus salicina: dormant stage 450h after low temperature treatment plant with flower bud from China, Sanyueli, S3-2 ILLUMINA 8293811078 bp
SRR12234098 RNA-Seq of Prunus salicina: dormant stage 450h after low temperature treatment plant with flower bud from China, Sanyueli, S3-1 ILLUMINA 9157149396 bp
SRR12234099 RNA-Seq of Prunus salicina: dormant stage 170h after low temperature treatment plant with flower bud from China, Sanyueli, S2-3 ILLUMINA 9533497708 bp
SRR12234100 RNA-Seq of Prunus salicina: dormant stage 170h after low temperature treatment plant with flower bud from China, Sanyueli, S2-2 ILLUMINA 9176677726 bp
SRR12234101 RNA-Seq of Prunus salicina: dormant stage 170h after low temperature treatment plant with flower bud from China, Sanyueli, S2-1 ILLUMINA 8822610440 bp
SRR12234102 RNA-Seq of Prunus salicina: dormant stage 0h after low temperature treatment plant with flower bud from China, Sanyueli, S1-3 ILLUMINA 9988548996 bp
SRR12234103 RNA-Seq of Prunus salicina: dormant stage 0h after low temperature treatment plant with flower bud from China, Sanyueli, S1-2 ILLUMINA 8390332670 bp
SRR12234104 RNA-Seq of Prunus salicina: dormant stage 0h after low temperature treatment plant with flower bud from China, Furongli, F1-2 ILLUMINA 7103943388 bp
SRR12234105 RNA-Seq of Prunus salicina: dormant stage 0h after low temperature treatment plant with flower bud from China, Furongli, F1-1 ILLUMINA 7602477962 bp
PRJNA752255 Prunus sp. cultivar:Santa Rosa and Goldrich Raw sequence reads -
9
Library Title Platform Total Base VCF File
SRR15369154 RNA-Seq of Prunus salicina: postharvest day 4 stage ethrel treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T2-C_1 ILLUMINA 9025719062 bp
SRR15369155 RNA-Seq of Prunus salicina: postharvest day 4 stage ethrel treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T2-B_1 ILLUMINA 10276368420 bp
SRR15369156 RNA-Seq of Prunus salicina: postharvest day 4 stage ethrel treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T2-A_1 ILLUMINA 8329130240 bp
SRR15369157 RNA-Seq of Prunus salicina: postharvest day 4 stage 1-MCP treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T1-B_1 ILLUMINA 7903112292 bp
SRR15369158 RNA-Seq of Prunus salicina: postharvest day 4 stage 1-MCP treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T1-C_1 ILLUMINA 8869491454 bp
SRR15369159 RNA-Seq of Prunus salicina: postharvest day 4 stage 1-MCP treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T1-A_1 ILLUMINA 5819385225 bp
SRR15369160 RNA-Seq of Prunus salicina: postharvest day 4 stage control treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T0-C_1 ILLUMINA 8521170996 bp
SRR15369161 RNA-Seq of Prunus salicina: postharvest day 4 stage control treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T0-B_1 ILLUMINA 1399639838 bp
SRR15369163 RNA-Seq of Prunus salicina: postharvest day 4 stage control treatment plant with fruit from Spain: Murcia, Santa Rosa, SNR-T0-A_1 ILLUMINA 4618073509 bp

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