Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
PRJNA754480 |
to understand the mechanisms of flower female sterile in pomegranate |
Zhao et al., 2022 |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR15447081 |
RNA-Seq of Punica granatum: 6 years 13.1-18.0 mm stage plant with functional male flowers pistil from China, Taishanhong, MF3 |
ILLUMINA |
21615269700 bp |
|
SRR15447082 |
RNA-Seq of Punica granatum: 6 years 10.1-13.0mm stage plant with functional male flowers pistil from China, Taishanhong, MF2 |
ILLUMINA |
22305617400 bp |
|
SRR15447083 |
RNA-Seq of Punica granatum: 6 years 5.0-10.0mm stage plant with functional male flowers pistil from China, Taishanhong, MF1 |
ILLUMINA |
19441784400 bp |
|
SRR15447084 |
RNA-Seq of Punica granatum: 6 years 13.1-18.0 mm stage plant with bisexual flowers pistil from China, Taishanhong, BF3 |
ILLUMINA |
22625595600 bp |
|
SRR15447085 |
RNA-Seq of Punica granatum: 6 years 10.1-13.0mm stage plant with bisexual flowers pistil from China, Taishanhong, BF2 |
ILLUMINA |
22242601200 bp |
|
SRR15447086 |
RNA-Seq of Punica granatum: 6 years 5.0-10.0mm stage plant with bisexual flowers pistil from China, Taishanhong, BF1 |
ILLUMINA |
19655619900 bp |
|
|
PRJNA773212 |
RNA-seq analysis of fruit cracking in pomegranate |
Wang et al., 2022 |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR16509471 |
RNA-Seq of Punica granatum: mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 2 |
ILLUMINA |
12946561340 bp |
|
SRR16509472 |
RNA-Seq of Punica granatum: mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 2 |
ILLUMINA |
12976670042 bp |
|
SRR16509473 |
RNA-Seq of Punica granatum: fruit bagging treatment mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 1 |
ILLUMINA |
11619557995 bp |
|
SRR16509474 |
RNA-Seq of Punica granatum: fruit bagging treatment mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 1 |
ILLUMINA |
12792519570 bp |
|
SRR16509475 |
RNA-Seq of Punica granatum: fruit bagging treatment mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 1 |
ILLUMINA |
13012094875 bp |
|
SRR16509476 |
RNA-Seq of Punica granatum: mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 3 |
ILLUMINA |
12648490332 bp |
|
SRR16509477 |
RNA-Seq of Punica granatum: mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 3 |
ILLUMINA |
12695360658 bp |
|
SRR16509478 |
RNA-Seq of Punica granatum: mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 3 |
ILLUMINA |
13146411189 bp |
|
SRR16509479 |
RNA-Seq of Punica granatum: mature fruit with pericarp from China: Zaozhuang\,Shandong Province, Daqingpitian, 2 |
ILLUMINA |
12792988429 bp |
|
|
PRJNA802023 |
Molecular dissection unveiling dwarfing effects of plant growth retardants on pomegranate (pomegranate) |
Qian et al., 2022 |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR17828925 |
RNA-Seq of Punica granatum: 90 days mannitol_15g/L treatment plant with leaf, Hongmanao, GSM5848847 |
ILLUMINA |
7639772520 bp |
|
SRR17828926 |
RNA-Seq of Punica granatum: 90 days mannitol_15g/L treatment plant with leaf, Hongmanao, GSM5848846 |
ILLUMINA |
7823477912 bp |
|
SRR17828927 |
RNA-Seq of Punica granatum: 90 days mannitol_2.5g/L treatment plant with leaf, Hongmanao, GSM5848845 |
ILLUMINA |
7456218128 bp |
|
SRR17828928 |
RNA-Seq of Punica granatum: 90 days mannitol_2.5g/L treatment plant with leaf, Hongmanao, GSM5848844 |
ILLUMINA |
7723467290 bp |
|
SRR17828929 |
RNA-Seq of Punica granatum: 90 days B9_8mg/L treatment plant with leaf, Hongmanao, GSM5848843 |
ILLUMINA |
8303427300 bp |
|
SRR17828930 |
RNA-Seq of Punica granatum: 90 days B9_8mg/L treatment plant with leaf, Hongmanao, GSM5848842 |
ILLUMINA |
9200881800 bp |
|
SRR17828931 |
RNA-Seq of Punica granatum: 90 days B9_6mg/L treatment plant with leaf, Hongmanao, GSM5848841 |
ILLUMINA |
6999299400 bp |
|
SRR17828932 |
RNA-Seq of Punica granatum: 90 days B9_6mg/L treatment plant with leaf, Hongmanao, GSM5848840 |
ILLUMINA |
7104269400 bp |
|
SRR17828937 |
RNA-Seq of Punica granatum: 90 days CK treatment plant with leaf, Hongmanao, GSM5848835 |
ILLUMINA |
7539802800 bp |
|
SRR17828938 |
RNA-Seq of Punica granatum: 90 days CK treatment plant with leaf, Hongmanao, GSM5848834 |
ILLUMINA |
8110506900 bp |
|
SRR18050790 |
RNA-Seq of Punica granatum: 90 days paclobutrazol_6mg/L treatment plant with leaf, Hongmanao, GSM5848836 |
ILLUMINA |
7361299528 bp |
|
SRR18050791 |
RNA-Seq of Punica granatum: 90 days paclobutrazol_6mg/L treatment plant with leaf, Hongmanao, GSM5848837 |
ILLUMINA |
6534291554 bp |
|
SRR18050792 |
RNA-Seq of Punica granatum: 90 days paclobutrazol_8mg/L treatment plant with leaf, Hongmanao, GSM5848838 |
ILLUMINA |
6586638600 bp |
|
SRR18050793 |
RNA-Seq of Punica granatum: 90 days paclobutrazol_8mg/L treatment plant with leaf, Hongmanao, GSM5848839 |
ILLUMINA |
5134751400 bp |
|
|
PRJNA806846 |
The transcriptome data from tissues of anther and petal in pomegranate. |
Wu et al., 2022 |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR18014066 |
RNA-Seq of Punica granatum: anthesis stage plant with petal from China: Shanghai, Wonderful ,Pg_petal9 |
ILLUMINA |
6439587374 bp |
|
SRR18014067 |
RNA-Seq of Punica granatum: anthesis stage plant with petal from China: Shanghai, Wonderful ,Pg_petal4 |
ILLUMINA |
7016287480 bp |
|
SRR18014068 |
RNA-Seq of Punica granatum: anthesis stage plant with petal from China: Shanghai, Wonderful ,Pg_petal2 |
ILLUMINA |
6782389084 bp |
|
SRR18014069 |
RNA-Seq of Punica granatum: anthesis stage plant with anther from China: Shanghai, Wonderful ,Pg_anther9 |
ILLUMINA |
6846381978 bp |
|
SRR18014070 |
RNA-Seq of Punica granatum: anthesis stage plant with anther from China: Shanghai, Wonderful ,Pg_anther4 |
ILLUMINA |
6298049034 bp |
|
SRR18014071 |
RNA-Seq of Punica granatum: anthesis stage plant with anther from China: Shanghai, Wonderful ,Pg_anther2 |
ILLUMINA |
6394866006 bp |
|
|
PRJNA846358 |
Transcriptome analysis of pomegranate leaves in response to salt stress |
- |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR19568829 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, H24_1 |
ILLUMINA |
10285814700 bp |
|
SRR19568830 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, L48_3 |
ILLUMINA |
9993860100 bp |
|
SRR19568831 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, L48_2 |
ILLUMINA |
10035508200 bp |
|
SRR19568832 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, L48_1 |
ILLUMINA |
9351920700 bp |
|
SRR19568833 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, L24_3 |
ILLUMINA |
8869788300 bp |
|
SRR19568834 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, L24_2 |
ILLUMINA |
9332654400 bp |
|
SRR19568835 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, L24_1 |
ILLUMINA |
12123234000 bp |
|
SRR19568836 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, CK_3 |
ILLUMINA |
10105084500 bp |
|
SRR19568837 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, H48_3 |
ILLUMINA |
10087569000 bp |
|
SRR19568838 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, H48_2 |
ILLUMINA |
9435854400 bp |
|
SRR19568839 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, H48_1 |
ILLUMINA |
11032791600 bp |
|
SRR19568840 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, H24_3 |
ILLUMINA |
10376736900 bp |
|
SRR19568841 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, H24_2 |
ILLUMINA |
9478638000 bp |
|
SRR19568842 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, CK_2 |
ILLUMINA |
10095271500 bp |
|
SRR19568843 |
RNA-Seq of Punica granatum: 1 year plant with leaf, Taishanhong, CK_1 |
ILLUMINA |
11554043700 bp |
|
|
PRJNA914887 |
Transcriptome data of pomegranate fruits of different cultivars at different periods. (hongyushizi, baiyushizi, Tunisia) |
Hu et al., 2022 |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR22859650 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW1_40 |
ILLUMINA |
7300145700 bp |
|
SRR22859651 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR3_120 |
ILLUMINA |
6400417200 bp |
|
SRR22859652 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR2_120 |
ILLUMINA |
8029576800 bp |
|
SRR22859653 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR1_120 |
ILLUMINA |
6036097500 bp |
|
SRR22859654 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR3_80 |
ILLUMINA |
7396236300 bp |
|
SRR22859655 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR2_80 |
ILLUMINA |
7379644200 bp |
|
SRR22859656 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR1_80 |
ILLUMINA |
7346886300 bp |
|
SRR22859657 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR3-2_120 |
ILLUMINA |
6278231400 bp |
|
SRR22859658 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR2-2_120 |
ILLUMINA |
6558724500 bp |
|
SRR22859659 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR1-2_120 |
ILLUMINA |
6411079800 bp |
|
SRR22859660 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR3-1_120 |
ILLUMINA |
6554791500 bp |
|
SRR22859661 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR2-1_120 |
ILLUMINA |
6415606200 bp |
|
SRR22859662 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR1-1_120 |
ILLUMINA |
6560520600 bp |
|
SRR22859663 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR3_80 |
ILLUMINA |
7297541400 bp |
|
SRR22859664 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR2_80 |
ILLUMINA |
5818296300 bp |
|
SRR22859665 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR1_80 |
ILLUMINA |
7336953900 bp |
|
SRR22859666 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR3_40 |
ILLUMINA |
6208482600 bp |
|
SRR22859667 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR3_40 |
ILLUMINA |
7720997400 bp |
|
SRR22859668 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR2_40 |
ILLUMINA |
5921526600 bp |
|
SRR22859669 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Hongyushizi, HSR1_40 |
ILLUMINA |
7235186100 bp |
|
SRR22859670 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW3_120 |
ILLUMINA |
6871164000 bp |
|
SRR22859671 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW2_120 |
ILLUMINA |
6429283800 bp |
|
SRR22859672 |
RNA-Seq of Punica granatum: 120 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW1_120 |
ILLUMINA |
6005560800 bp |
|
SRR22859673 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW3_80 |
ILLUMINA |
5935672500 bp |
|
SRR22859674 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW2_80 |
ILLUMINA |
6178410600 bp |
|
SRR22859675 |
RNA-Seq of Punica granatum: 80 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW1_80 |
ILLUMINA |
5402514900 bp |
|
SRR22859676 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW3_40 |
ILLUMINA |
7139071800 bp |
|
SRR22859677 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Baiyushizi, HSW2_40 |
ILLUMINA |
7122983100 bp |
|
SRR22859678 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR2_40 |
ILLUMINA |
7125406500 bp |
|
SRR22859679 |
RNA-Seq of Punica granatum: 40 days after flower stage plant with seeds from China: Anhui, Tunisia, SSR1_40 |
ILLUMINA |
5822474100 bp |
|
|