Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
Others

Project

Bioproject Description Publication GVCF File Library Num.
PRJNA432798 Constant conflict between Gypsy LTR retrotransposons and CHH methylation within a stress-adapted mangrove genome Wang et al., 2018
2
Library Title Platform Total Base VCF File
SRR6957493 RNA-Seq of Rhizophora apiculata: leaf bud from China: Qinlan Harbour\, Hainan, ra_RNA ILLUMINA 4484209200 bp
SRR6957523 RNA-Seq of Rhizophora apiculata: leaf bud from China: Qinlan Harbour\, Hainan, ra_RNA_2 ILLUMINA 4473681600 bp
PRJNA706926 Gene body methylation confers transcription robustness in mangroves during long-term stress adaptation Wang et al., 2021
6
Library Title Platform Total Base VCF File
SRR13876880 RNA-Seq of Rhizophora apiculata: salt treatment plant with leaf from China: Hainan\,Qinglan harbor, Rap_RNA_seq_salt_3 ILLUMINA 5871731100 bp
SRR13876881 RNA-Seq of Rhizophora apiculata: salt treatment plant with leaf from China: Hainan\,Qinglan harbor, Rap_RNA_seq_salt_2 ILLUMINA 5830570500 bp
SRR13876882 RNA-Seq of Rhizophora apiculata: salt treatment plant with leaf from China: Hainan\,Qinglan harbor, Rap_RNA_seq_salt_1 ILLUMINA 5876273400 bp
SRR13876884 RNA-Seq of Rhizophora apiculata: control plant with leaf from China: Hainan\,Qinglan harbor, Rap_RNA_seq_control_3 ILLUMINA 5699145000 bp
SRR13876885 RNA-Seq of Rhizophora apiculata: control plant with leaf from China: Hainan\,Qinglan harbor, Rap_RNA_seq_control_2 ILLUMINA 5507502900 bp
SRR13876886 RNA-Seq of Rhizophora apiculata: control plant with leaf from China: Hainan\,Qinglan harbor, Rap_RNA_seq_control_1 ILLUMINA 5696636100 bp
PRJNA817364 Mangrove Genome Project He et al., 2022
2
Library Title Platform Total Base VCF File
SRR18449575 RNA-Seq of Rhizophora apiculata: mature plant with root ILLUMINA 7239848784 bp
SRR18449586 RNA-Seq of Rhizophora apiculata: mature plant with leaf ILLUMINA 8366646374 bp
PRJNA880605 transcriptomics of the chilling stress response in Rhizophora apiculata -
16
Library Title Platform Total Base VCF File
SRR21625708 RNA-Seq of Rhizophora apiculata: post-chilling recovery at 28℃ treatment seedling with leaf from China: Hainan, RA_R5 ILLUMINA 7776796500 bp
SRR21625709 RNA-Seq of Rhizophora apiculata: post-chilling recovery at 28℃ treatment seedling with leaf from China: Hainan, RA_R4 ILLUMINA 7522498800 bp
SRR21625710 RNA-Seq of Rhizophora apiculata: post-chilling recovery at 28℃ treatment seedling with leaf from China: Hainan, RA_R3 ILLUMINA 7313062500 bp
SRR21625711 RNA-Seq of Rhizophora apiculata: post-chilling recovery at 28℃ treatment seedling with leaf from China: Hainan, RA_R2 ILLUMINA 7128776700 bp
SRR21625712 RNA-Seq of Rhizophora apiculata: post-chilling recovery at 28℃ treatment seedling with leaf from China: Hainan, RA_R1 ILLUMINA 7193673900 bp
SRR21617260 RNA-Seq of Rhizophora apiculata: chilling at 5℃ treatment seedling with leaf from China: Hainan, RA_C3 ILLUMINA 7268263200 bp
SRR21617261 RNA-Seq of Rhizophora apiculata: chilling at 5℃ treatment seedling with leaf from China: Hainan, RA_C2 ILLUMINA 9096783900 bp
SRR21617262 RNA-Seq of Rhizophora apiculata: chilling at 5℃ treatment seedling with leaf from China: Hainan, RA_C1 ILLUMINA 7805527800 bp
SRR21617263 RNA-Seq of Rhizophora apiculata: chilling at 15℃ treatment seedling with leaf from China: Hainan, RA_LT3 ILLUMINA 7284673800 bp
SRR21617264 RNA-Seq of Rhizophora apiculata: chilling at 15℃ treatment seedling with leaf from China: Hainan, RA_LT2 ILLUMINA 6659327100 bp
SRR21617265 RNA-Seq of Rhizophora apiculata: chilling at 15℃ treatment seedling with leaf from China: Hainan, RA_LT1 ILLUMINA 7339714200 bp
SRR21610970 RNA-Seq of Rhizophora apiculata: pre-chilling acclimation temperature of 28℃ treatment seedling with leaf from China: Hainan, RA_P5 ILLUMINA 7298628600 bp
SRR21610971 RNA-Seq of Rhizophora apiculata: pre-chilling acclimation temperature of 28℃ treatment seedling with leaf from China: Hainan, RA_P4 ILLUMINA 7617947400 bp
SRR21610972 RNA-Seq of Rhizophora apiculata: pre-chilling acclimation temperature of 28℃ treatment seedling with leaf from China: Hainan, RA_P3 ILLUMINA 7588739400 bp
SRR21610973 RNA-Seq of Rhizophora apiculata: pre-chilling acclimation temperature of 28℃ treatment seedling with leaf from China: Hainan, RA_P2 ILLUMINA 7672043400 bp
SRR21610974 RNA-Seq of Rhizophora apiculata: pre-chilling acclimation temperature of 28℃ treatment seedling with leaf from China: Hainan, RA_P1 ILLUMINA 7445204400 bp

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