Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA217841 Our study generated the first transcriptome data of Sophora japonica using RNA-seq, providing a valuable resource for future research in gene expression and genomics. -
1
Library Title Platform Total Base VCF File
SRR964825 RNA-Seq of Styphnolobium japonicum: tender shoots, young leaves and flower buds from China: Yangzhou\, Jiangsu Province, Sja ILLUMINA 8700105054 bp
PRJNA665329 Sophora japonica seedlings were exposed to short-term treatments with N starvation and 20% PEG-6000-induced drought stresses to explore the molecular response to abiotic stresses in S. japonica fine roots. Tian et al., 2021
12
Library Title Platform Total Base VCF File
SRR12701226 RNA-Seq of Styphnolobium japonicum: drought with nitrogen starvation treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, LL ILLUMINA 8669728260 bp
SRR12701227 RNA-Seq of Styphnolobium japonicum: nitrogen starvation treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, LN ILLUMINA 9535158096 bp
SRR12701228 RNA-Seq of Styphnolobium japonicum: nitrogen starvation treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, LN ILLUMINA 9388922048 bp
SRR12701229 RNA-Seq of Styphnolobium japonicum: nitrogen starvation treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, LN ILLUMINA 10354858864 bp
SRR12701230 RNA-Seq of Styphnolobium japonicum: drought treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, NL ILLUMINA 8654407208 bp
SRR12701231 RNA-Seq of Styphnolobium japonicum: drought treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, NL ILLUMINA 9134193658 bp
SRR12701232 RNA-Seq of Styphnolobium japonicum: drought treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, NL ILLUMINA 9220783524 bp
SRR12701233 RNA-Seq of Styphnolobium japonicum: control treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, NN ILLUMINA 8970575362 bp
SRR12701234 RNA-Seq of Styphnolobium japonicum: drought with nitrogen starvation treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, LL ILLUMINA 9242230120 bp
SRR12701235 RNA-Seq of Styphnolobium japonicum: drought with nitrogen starvation treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, LL ILLUMINA 9475069186 bp
SRR12701236 RNA-Seq of Styphnolobium japonicum: control treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, NN ILLUMINA 8690393084 bp
SRR12701237 RNA-Seq of Styphnolobium japonicum: control treatment and three months old and seedlings stage plant with fine roots from China:Yangling\,Shaanxi, NN ILLUMINA 7703963652 bp
PRJNA797104 Comparative transcriptomics analysis reveals the potential regulatory mechanisms of Sophora japonica Linn. flower development at different stages -
15
Library Title Platform Total Base VCF File
SRR17615056 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S4_1 ILLUMINA 8483760600 bp
SRR17615057 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S3_3 ILLUMINA 8835249000 bp
SRR17615058 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S3_2 ILLUMINA 7428102000 bp
SRR17615059 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S3_1 ILLUMINA 7719319800 bp
SRR17615060 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S2_3 ILLUMINA 8088182400 bp
SRR17615061 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S2_2 ILLUMINA 7354414500 bp
SRR17615062 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S2_1 ILLUMINA 8174968200 bp
SRR17615063 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S1_3 ILLUMINA 7991525400 bp
SRR17615064 RNA-Seq of Styphnolobium japonicum: 8-years old and blooming stage plant with flower from China:Chongqing, S5_3 ILLUMINA 7809592800 bp
SRR17615065 RNA-Seq of Styphnolobium japonicum: 8-years old and blooming stage plant with flower from China:Chongqing, S5_2 ILLUMINA 8144433000 bp
SRR17615066 RNA-Seq of Styphnolobium japonicum: 8-years old and blooming stage plant with flower from China:Chongqing, S5_1 ILLUMINA 8208502200 bp
SRR17615067 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S4_3 ILLUMINA 7531518000 bp
SRR17615068 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S4_2 ILLUMINA 7642503900 bp
SRR17615069 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S1_2 ILLUMINA 8062603200 bp
SRR17615070 RNA-Seq of Styphnolobium japonicum: 8-years old and bud stage plant with flower from China:Chongqing, S1_1 ILLUMINA 7737304200 bp
PRJNA998934 In this study, we sequenced the transcriptome of the root of Styphnolobium japonicum. We used the data here assist the study of characterization of UGTs in Styphnolobium japonicum. -
3
Library Title Platform Total Base VCF File
SRR25432827 RNA-Seq of Styphnolobium japonicum: growing stage plant with stem from China: Beijing, Sj_stem ILLUMINA 12338701500 bp
SRR25432828 RNA-Seq of Styphnolobium japonicum: growing stage plant with flower from China: Beijing, Sj_flower ILLUMINA 11323401900 bp
SRR25432829 RNA-Seq of Styphnolobium japonicum: growing stage plant with leaf from China: Beijing, Sj_leaf ILLUMINA 12390128100 bp

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