| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJDB16051 |
We performed transcriptome analysis comparing SLs, or mock-treated Day 14 axillary buds in addition to Day 0 axillary buds by RNA-seq using MGISEQ-2000 platform. |
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 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| DRR484503 |
RNA-Seq of Ginkgo biloba: 0day axillary bud during no treatment from Japan:Miyagi\, Sendai, Day0 ab-1 |
BGISEQ |
4809079200 bp |
|
| DRR484504 |
RNA-Seq of Ginkgo biloba: 0day axillary bud during no treatment from Japan:Miyagi\, Sendai, Day0 ab-2 |
BGISEQ |
4817580600 bp |
|
| DRR484505 |
RNA-Seq of Ginkgo biloba: 0day axillary bud during no treatment from Japan:Miyagi\, Sendai, Day0 ab-3 |
BGISEQ |
4810860400 bp |
|
| DRR484506 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during mock treatment from Japan:Miyagi\, Sendai, Day14 ab_mock-1 |
BGISEQ |
4810720600 bp |
|
| DRR484507 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during mock treatment from Japan:Miyagi\, Sendai, Day14 ab_mock-2 |
BGISEQ |
4805443000 bp |
|
| DRR484508 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during mock treatment from Japan:Miyagi\, Sendai, Day14 ab_mock-3 |
BGISEQ |
4819118600 bp |
|
| DRR484509 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during GR24+ treatment from Japan:Miyagi\, Sendai, Day14 ab_(+)-GR24-1 |
BGISEQ |
4827981200 bp |
|
| DRR484510 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during GR24+ treatment from Japan:Miyagi\, Sendai, Day14 ab_(+)-GR24-2 |
BGISEQ |
4825522600 bp |
|
| DRR484511 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during GR24+ treatment from Japan:Miyagi\, Sendai, Day14 ab_(+)-GR24-3 |
BGISEQ |
4815428600 bp |
|
| DRR484512 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during GR24- treatment from Japan:Miyagi\, Sendai, Day14 ab_(-)-GR24-1 |
BGISEQ |
4820716400 bp |
|
| DRR484513 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during GR24- treatment from Japan:Miyagi\, Sendai, Day14 ab_(-)-GR24-2 |
BGISEQ |
4829392800 bp |
|
| DRR484514 |
RNA-Seq of Ginkgo biloba: 14days axillary bud during GR24- treatment from Japan:Miyagi\, Sendai, Day14 ab_(-)-GR24-3 |
BGISEQ |
4813027400 bp |
|
|
| PRJNA485059 |
Full-length transcriptome sequences of ginkgo |
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|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR7948405 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 3-6K_C01_1 |
PACBIO_SMRT |
3856280822 bp |
|
| SRR7948407 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 3-6K_A05_1 |
PACBIO_SMRT |
3952434525 bp |
|
| SRR7948408 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 2-3K_G04_1 |
PACBIO_SMRT |
6198808268 bp |
|
| SRR7948411 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 2-3K_B01_1 |
PACBIO_SMRT |
4099399745 bp |
|
| SRR7948406 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 3-6K_A04_1 |
PACBIO_SMRT |
3283693376 bp |
|
| SRR7948409 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 2-3K_H04_1 |
PACBIO_SMRT |
6979013100 bp |
|
| SRR7948410 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 1-2K_F04_1 |
PACBIO_SMRT |
6448703115 bp |
|
| SRR7948412 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 1-2K_A01_1 |
PACBIO_SMRT |
3294542040 bp |
|
| SRR7948413 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 1-2K_E04_1 |
PACBIO_SMRT |
8793497719 bp |
|
| SRR7658691 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 3-6K_C01_1 |
PACBIO_SMRT |
3856280822 bp |
|
| SRR7658692 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 1-2K_A01_1 |
PACBIO_SMRT |
538569196 bp |
|
| SRR7658693 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 1-2K_E04_1 |
PACBIO_SMRT |
8793497719 bp |
|
| SRR7658694 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 1-2K_F04_1 |
PACBIO_SMRT |
2239188274 bp |
|
| SRR7658695 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 2-3K_B01_1 |
PACBIO_SMRT |
4099399745 bp |
|
| SRR7658696 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 2-3K_G04_1 |
PACBIO_SMRT |
6198808268 bp |
|
| SRR7658697 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 2-3K_H04_1 |
PACBIO_SMRT |
6979013100 bp |
|
| SRR7658698 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 3-6K_A04_1 |
PACBIO_SMRT |
3283693376 bp |
|
| SRR7658699 |
RNA-Seq of Ginkgo biloba: 31 years old old mature all plant from China:Hubei, Jiafoshou, 3-6K_A05_1 |
PACBIO_SMRT |
3952434525 bp |
|
|
| PRJNA678125 |
In the present study, we used RNA-seq to investigate the molecular mechanisms of sexual differences in response to drought stress at the transcriptome level. |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR13052379 |
RNA-Seq of Ginkgo biloba: female-1 leaf full expanded stage during water stop treatment from China:Nanjing, Dafozhi, FD-1 |
ILLUMINA |
6700350590 bp |
|
| SRR13052380 |
RNA-Seq of Ginkgo biloba: female-3 leaf full expanded stage during water well treatment from China:Nanjing, Dafozhi, FC-3 |
ILLUMINA |
9293219348 bp |
|
| SRR13052381 |
RNA-Seq of Ginkgo biloba: female-2 leaf full expanded stage during water well treatment from China:Nanjing, Dafozhi, FC-2 |
ILLUMINA |
9020519706 bp |
|
| SRR13052382 |
RNA-Seq of Ginkgo biloba: female-1 leaf full expanded stage during water well treatment from China:Nanjing, Dafozhi, FC-1 |
ILLUMINA |
8377720036 bp |
|
| SRR13052383 |
RNA-Seq of Ginkgo biloba: male-3 leaf full expanded stage during water stop treatment from China:Nanjing, Dafozhi, MD-3 |
ILLUMINA |
9384417996 bp |
|
| SRR13052384 |
RNA-Seq of Ginkgo biloba: male-2 leaf full expanded stage during water stop treatment from China:Nanjing, Dafozhi, MD-2 |
ILLUMINA |
8413978586 bp |
|
| SRR13052385 |
RNA-Seq of Ginkgo biloba: male-1 leaf full expanded stage during water stop treatment from China:Nanjing, Dafozhi, MD-1 |
ILLUMINA |
7197082252 bp |
|
| SRR13052386 |
RNA-Seq of Ginkgo biloba: male-3 leaf full expanded stage during water well treatment from China:Nanjing, Dafozhi, MC-3 |
ILLUMINA |
6488216124 bp |
|
| SRR13052387 |
RNA-Seq of Ginkgo biloba: female-3 leaf full expanded stage during water stop treatment from China:Nanjing, Dafozhi, FD-3 |
ILLUMINA |
6095891416 bp |
|
| SRR13052388 |
RNA-Seq of Ginkgo biloba: female-2 leaf full expanded stage during water stop treatment from China:Nanjing, Dafozhi, FD-2 |
ILLUMINA |
6503883964 bp |
|
| SRR13052389 |
RNA-Seq of Ginkgo biloba: male-2 leaf full expanded stage during water well treatment from China:Nanjing, Dafozhi, MC-2 |
ILLUMINA |
7175679212 bp |
|
| SRR13052390 |
RNA-Seq of Ginkgo biloba: male-1 leaf full expanded stage during water well treatment from China:Nanjing, Dafozhi, MC-1 |
ILLUMINA |
7047483208 bp |
|
|
| PRJNA896381 |
The transcriptomic analysis of apical buds of branches with normal and abnormal leaves Ginkgo biloba SongZhen. |
Tang et al., 2022 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR22163727 |
RNA-Seq of Ginkgo biloba: 4 years old plant with buds from China: Tai'an\, Shandong province, abnormal-type leaf, rep3 |
ILLUMINA |
12304302554 bp |
|
| SRR22163728 |
RNA-Seq of Ginkgo biloba: 4 years old plant with buds from China: Tai'an\, Shandong province, abnormal-type leaf, rep2 |
ILLUMINA |
10965489838 bp |
|
| SRR22163729 |
RNA-Seq of Ginkgo biloba: 4 years old plant with buds from China: Tai'an\, Shandong province, abnormal-type leaf, rep1 |
ILLUMINA |
8268147650 bp |
|
| SRR22163730 |
RNA-Seq of Ginkgo biloba: 4 years old plant with buds from China: Tai'an\, Shandong province, normal-type leaf, rep3 |
ILLUMINA |
8260933048 bp |
|
| SRR22163731 |
RNA-Seq of Ginkgo biloba: 4 years old plant with buds from China: Tai'an\, Shandong province, normal-type leaf, rep2 |
ILLUMINA |
9041681260 bp |
|
| SRR22163732 |
RNA-Seq of Ginkgo biloba: 4 years old plant with buds from China: Tai'an\, Shandong province, normal-type leaf, rep1 |
ILLUMINA |
17056674460 bp |
|
|
| PRJNA942080 |
Transcriptome Regulation of the Secondary Trunk of Ginkgo biloba L. |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR23730288 |
RNA-Seq of Ginkgo biloba: stem biological replicate 1 from China:Shandong, CS1 |
ILLUMINA |
6743339700 bp |
|
| SRR23730289 |
RNA-Seq of Ginkgo biloba: stem biological replicate 2 from China:Shandong, CS2 |
ILLUMINA |
7056376500 bp |
|
| SRR23730290 |
RNA-Seq of Ginkgo biloba: stem biological replicate 1 from China:Shandong, CF1 |
ILLUMINA |
6978031200 bp |
|
| SRR23730291 |
RNA-Seq of Ginkgo biloba: stem biological replicate 2 from China:Shandong, CF2 |
ILLUMINA |
6829084500 bp |
|
| SRR23730292 |
RNA-Seq of Ginkgo biloba: stem biological replicate 2 from China:Shandong, TS2 |
ILLUMINA |
7088802900 bp |
|
| SRR23730293 |
RNA-Seq of Ginkgo biloba: stem biological replicate 3 from China:Shandong, TS3 |
ILLUMINA |
6396311100 bp |
|
| SRR23730294 |
RNA-Seq of Ginkgo biloba: stem biological replicate 3 from China:Shandong, CF3 |
ILLUMINA |
6889745400 bp |
|
| SRR23730295 |
RNA-Seq of Ginkgo biloba: stem biological replicate 3 from China:Shandong, CS3 |
ILLUMINA |
6537014100 bp |
|
| SRR23730296 |
RNA-Seq of Ginkgo biloba: stem biological replicate 1 from China:Shandong, TF1 |
ILLUMINA |
6773562300 bp |
|
| SRR23730297 |
RNA-Seq of Ginkgo biloba: stem biological replicate 2 from China:Shandong, TF2 |
ILLUMINA |
7179634500 bp |
|
| SRR23730298 |
RNA-Seq of Ginkgo biloba: stem biological replicate 3 from China:Shandong, TF3 |
ILLUMINA |
7098195000 bp |
|
| SRR23730299 |
RNA-Seq of Ginkgo biloba: stem biological replicate 1 from China:Shandong, TS1 |
ILLUMINA |
7112794800 bp |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
12