Species Info.

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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA150657 Transcriptional profiling analysis in Populus yunnanensis provides insights into the molecular mechanisms of sexual differences in plant salinity tolerance Jiang et al., 2012
4
Library Title Platform Total Base VCF File
SRR400597 RNA-Seq of Populus yunnanensis: male none treatment plant with fourth fully expanded and intact young leaf near the shoot apex of each plant, none, GSM864075 ILLUMINA 126231525 bp
SRR400598 RNA-Seq of Populus yunnanensis: male salinity stress treatment plant with fourth fully expanded and intact young leaf near the shoot apex of each plant, salinity stress, GSM864076 ILLUMINA 103135445 bp
SRR400599 RNA-Seq of Populus yunnanensis: female none treatment plant with fourth fully expanded and intact young leaf near the shoot apex of each plant, none, GSM864077 ILLUMINA 87811640 bp
SRR400600 RNA-Seq of Populus yunnanensis: female salinity stress treatment plant with fourth fully expanded and intact young leaf near the shoot apex of each plant, salinity stress, GSM864078 ILLUMINA 123319875 bp
PRJNA506110 Perform transcriptome profiling in upright and inverted cuttings of Populu yunnanensis and reveal the main changes induced by inversion -
24
Library Title Platform Total Base VCF File
SRR8208618 RNA-Seq of Populus yunnanensis: Position B of inverted sample 1 one year old vegetative growth plant with bark from China: Kunming, BI1 ILLUMINA 6680057400 bp
SRR8208619 RNA-Seq of Populus yunnanensis: Position B of upright sample 3 one year old vegetative growth plant with bark from China: Kunming, BU3 ILLUMINA 7002141000 bp
SRR8208620 RNA-Seq of Populus yunnanensis: Position B of upright sample 2 one year old vegetative growth plant with bark from China: Kunming, BU2 ILLUMINA 6565112100 bp
SRR8208621 RNA-Seq of Populus yunnanensis: Position B of upright sample 1 one year old vegetative growth plant with bark from China: Kunming, BU1 ILLUMINA 8490571800 bp
SRR8208622 RNA-Seq of Populus yunnanensis: Position C of upright sample 2 one year old vegetative growth plant with bark from China: Kunming, CU2 ILLUMINA 6905329800 bp
SRR8208623 RNA-Seq of Populus yunnanensis: Position C of upright sample 1 one year old vegetative growth plant with bark from China: Kunming, CU1 ILLUMINA 6138000000 bp
SRR8208624 RNA-Seq of Populus yunnanensis: Position B of inverted sample 3 one year old vegetative growth plant with bark from China: Kunming, BI3 ILLUMINA 6351574800 bp
SRR8208625 RNA-Seq of Populus yunnanensis: Position B of inverted sample 2 one year old vegetative growth plant with bark from China: Kunming, BI2 ILLUMINA 6474206700 bp
SRR8208626 RNA-Seq of Populus yunnanensis: Position C of inverted sample 1 one year old vegetative growth plant with bark from China: Kunming, CI1 ILLUMINA 6666507000 bp
SRR8208627 RNA-Seq of Populus yunnanensis: Position C of upright sample 3 one year old vegetative growth plant with bark from China: Kunming, CU3 ILLUMINA 6332019300 bp
SRR8208628 RNA-Seq of Populus yunnanensis: Position E of upright sample 3 one year old vegetative growth plant with bark from China: Kunming, EU3 ILLUMINA 7249383300 bp
SRR8208629 RNA-Seq of Populus yunnanensis: Position E of inverted sample 1 one year old vegetative growth plant with bark from China: Kunming, EI1 ILLUMINA 7475991000 bp
SRR8208630 RNA-Seq of Populus yunnanensis: Position E of inverted sample 2 one year old vegetative growth plant with bark from China: Kunming, EI2 ILLUMINA 7074638100 bp
SRR8208631 RNA-Seq of Populus yunnanensis: Position E of inverted sample 3 one year old vegetative growth plant with bark from China: Kunming, EI3 ILLUMINA 6938789100 bp
SRR8208632 RNA-Seq of Populus yunnanensis: Position C of inverted sample 3 one year old vegetative growth plant with bark from China: Kunming, CI3 ILLUMINA 7253083800 bp
SRR8208633 RNA-Seq of Populus yunnanensis: Position C of inverted sample 2 one year old vegetative growth plant with bark from China: Kunming, CI2 ILLUMINA 6543190500 bp
SRR8208634 RNA-Seq of Populus yunnanensis: Position D of upright sample 2 one year old vegetative growth plant with bark from China: Kunming, DU2 ILLUMINA 7940320800 bp
SRR8208635 RNA-Seq of Populus yunnanensis: Position D of upright sample 1 one year old vegetative growth plant with bark from China: Kunming, DU1 ILLUMINA 7636686900 bp
SRR8208636 RNA-Seq of Populus yunnanensis: Position D of inverted sample 1 one year old vegetative growth plant with bark from China: Kunming, DI1 ILLUMINA 6934245300 bp
SRR8208637 RNA-Seq of Populus yunnanensis: Position D of upright sample 3 one year old vegetative growth plant with bark from China: Kunming, DU3 ILLUMINA 7108965900 bp
SRR8208638 RNA-Seq of Populus yunnanensis: Position D of inverted sample 3 one year old vegetative growth plant with bark from China: Kunming, DI3 ILLUMINA 6235079400 bp
SRR8208639 RNA-Seq of Populus yunnanensis: Position D of inverted sample 2 one year old vegetative growth plant with bark from China: Kunming, DI2 ILLUMINA 6706369500 bp
SRR8208640 RNA-Seq of Populus yunnanensis: Position E of upright sample 2 one year old vegetative growth plant with bark from China: Kunming, EU2 ILLUMINA 6922133700 bp
SRR8208641 RNA-Seq of Populus yunnanensis: Position E of upright sample 1 one year old vegetative growth plant with bark from China: Kunming, EU1 ILLUMINA 7771936200 bp
PRJNA505895 Perform transcriptome profiling in upright and inverted cuttings of Populu yunnanensis and reveal the main changes induced by inversion -
6
Library Title Platform Total Base VCF File
SRR8204175 RNA-Seq of Populus yunnanensis: Upright sample 1 one year old vegetative growth plant with leaf from China: Kunming, LC1 ILLUMINA 6713087400 bp
SRR8204176 RNA-Seq of Populus yunnanensis: Upright sample 2 one year old vegetative growth plant with leaf from China: Kunming, LC2 ILLUMINA 6659226300 bp
SRR8204177 RNA-Seq of Populus yunnanensis: Upright sample 3 one year old vegetative growth plant with leaf from China: Kunming, LC3 ILLUMINA 6719390700 bp
SRR8204178 RNA-Seq of Populus yunnanensis: Inverted sample 1 one year old vegetative growth plant with leaf from China: Kunming, LI1 ILLUMINA 6728454000 bp
SRR8204179 RNA-Seq of Populus yunnanensis: Inverted sample 2 one year old vegetative growth plant with leaf from China: Kunming, LI2 ILLUMINA 6775662000 bp
SRR8204180 RNA-Seq of Populus yunnanensis: Inverted sample 3 one year old vegetative growth plant with leaf from China: Kunming, LI3 ILLUMINA 6646372500 bp
PRJNA542544 Bark tissue transcriptome changes induced by inversion in Populus yunnanensis cuttings -
6
Library Title Platform Total Base VCF File
SRR9046742 RNA-Seq of Populus yunnanensis: Inverted sample 2 one year old vegetative growth plant with bark from China: Kunming, BI2 ILLUMINA 6660406200 bp
SRR9046743 RNA-Seq of Populus yunnanensis: Inverted sample 3 one year old vegetative growth plant with bark from China: Kunming, BI3 ILLUMINA 6638320500 bp
SRR9046744 RNA-Seq of Populus yunnanensis: Upright sample 3 one year old vegetative growth plant with bark from China: Kunming, BU3 ILLUMINA 6623523600 bp
SRR9046745 RNA-Seq of Populus yunnanensis: Inverted sample 1 one year old vegetative growth plant with bark from China: Kunming, BI1 ILLUMINA 6658591800 bp
SRR9046746 RNA-Seq of Populus yunnanensis: Upright sample 1 one year old vegetative growth plant with bark from China: Kunming, BU1 ILLUMINA 6761784300 bp
SRR9046747 RNA-Seq of Populus yunnanensis: Upright sample 2 one year old vegetative growth plant with bark from China: Kunming, BU2 ILLUMINA 6642818100 bp
PRJNA589596 Genome-wide Analysis of Transcription Factors among Differentially Expressed Genes Induced by Adding Exogenous Nitrogen in Poplar Plants under Cadmium Stress Huang et al., 2019
9
Library Title Platform Total Base VCF File
SRR10446638 RNA-Seq of Populus yunnanensis: none\, control treatment 4months seedlings with leaf from China: Liangshan, GSM4160634 ILLUMINA 4096735200 bp
SRR10446639 RNA-Seq of Populus yunnanensis: none\, control treatment 4months seedlings with leaf from China: Liangshan, GSM4160635 ILLUMINA 6830895900 bp
SRR10446640 RNA-Seq of Populus yunnanensis: none\, control treatment 4months seedlings with leaf from China: Liangshan, GSM4160636 ILLUMINA 7317576300 bp
SRR10446641 RNA-Seq of Populus yunnanensis: Cd up to a final concentration of 480 mg· kg-1 (480 mg Cd2+·kg -1 dry weight soil). treatment 4months seedlings with leaf from China: Liangshan, GSM4160637 ILLUMINA 6668516100 bp
SRR10446642 RNA-Seq of Populus yunnanensis: Cd up to a final concentration of 480 mg· kg-1 (480 mg Cd2+·kg -1 dry weight soil). treatment 4months seedlings with leaf from China: Liangshan, GSM4160638 ILLUMINA 7093272600 bp
SRR10446643 RNA-Seq of Populus yunnanensis: Cd up to a final concentration of 480 mg· kg-1 (480 mg Cd2+·kg -1 dry weight soil). treatment 4months seedlings with leaf from China: Liangshan, GSM4160639 ILLUMINA 7247508600 bp
SRR10446644 RNA-Seq of Populus yunnanensis: Cd and N (up to a final concentration of 480 mg Cd2+·kg-1 and 360 mg N·kg-1 dry weight soil). treatment 4months seedlings with leaf from China: Liangshan, GSM4160640 ILLUMINA 7032880200 bp
SRR10446645 RNA-Seq of Populus yunnanensis: Cd and N (up to a final concentration of 480 mg Cd2+·kg-1 and 360 mg N·kg-1 dry weight soil). treatment 4months seedlings with leaf from China: Liangshan, GSM4160641 ILLUMINA 7697489400 bp
SRR10446646 RNA-Seq of Populus yunnanensis: Cd and N (up to a final concentration of 480 mg Cd2+·kg-1 and 360 mg N·kg-1 dry weight soil). treatment 4months seedlings with leaf from China: Liangshan, GSM4160642 ILLUMINA 3962408550 bp

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