Omics-Seq

Project

Bioproject

Description

Publication

GVCF File

Library Num.

PRJEB21674

Generated transcriptome data from Metasequoia glyptostroboides

Library	Title	Platform	Total Base	VCF File
ERR2040817	RNA-Seq of Metasequoia glyptostroboides: plant with leaves from , NRXL	ILLUMINA	2775141540 bp

PRJNA271247

Analyzed using 24 digital gene expression (DGE) tag profiles using Illumina, generating a total of 69,520 putative transcripts.

Zhao et all., 2015

Library	Title	Platform	Total Base
SRR1736585	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control11	ILLUMINA	294614136 bp
SRR1736586	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control12	ILLUMINA	381715344 bp
SRR1736587	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control13	ILLUMINA	250532280 bp
SRR1736588	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control21	ILLUMINA	669431304 bp
SRR1736589	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control22	ILLUMINA	514352304 bp
SRR1736590	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control23	ILLUMINA	301967676 bp
SRR1736592	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control31	ILLUMINA	166044420 bp
SRR1736593	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control32	ILLUMINA	229998816 bp
SRR1736595	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control33	ILLUMINA	610331436 bp
SRR1736596	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control41	ILLUMINA	380864628 bp
SRR1736597	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control42	ILLUMINA	438170904 bp
SRR1736599	RNA-Seq of Metasequoia glyptostroboides: naturally growing 5 years plant with buds with the current years's stems, Control43	ILLUMINA	499505400 bp
SRR1736600	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated11	ILLUMINA	354706776 bp
SRR1736602	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated12	ILLUMINA	189827424 bp
SRR1736603	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated13	ILLUMINA	391580244 bp
SRR1736606	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated21	ILLUMINA	863085420 bp
SRR1736607	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated22	ILLUMINA	430233444 bp
SRR1736608	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated23	ILLUMINA	516634308 bp
SRR1736610	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated31	ILLUMINA	236868336 bp
SRR1736611	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated32	ILLUMINA	481981356 bp
SRR1736615	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated33	ILLUMINA	624233196 bp
SRR1736618	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated41	ILLUMINA	426812328 bp
SRR1736619	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated42	ILLUMINA	582350148 bp
SRR1736620	RNA-Seq of Metasequoia glyptostroboides: Hormone treated 5 years plant with buds with the current years's stems, Treated43	ILLUMINA	728568360 bp

PRJNA872838

To analyze lncRNA changes during M. glyptostroboides seed aging.

Luo et all., 2022

Library	Title	Platform	Total Base	VCF File
SRR21186137	RNA-Seq of Metasequoia glyptostroboides: 300 years plant with seed from China, Sa'm'pleA	PACBIO_SMRT	1069385575 bp

PRJNA999065

Transcriptome analysis of differentially expressed genes during adventitious root formation of Metasequoia glyptostroboides plantlets

Library	Title	Platform	Total Base
SRR25434627	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK16 replicate 1	ILLUMINA	7459125180 bp
SRR25434628	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK12 replicate 3	ILLUMINA	9869581064 bp
SRR25434629	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK12 replicate 2	ILLUMINA	8090392760 bp
SRR25434630	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK12 replicate 1	ILLUMINA	9861132312 bp
SRR25434631	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK10 replicate 3	ILLUMINA	8213676408 bp
SRR25434632	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK10 replicate 2	ILLUMINA	8479797298 bp
SRR25434633	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK10 replicate 1	ILLUMINA	8630555396 bp
SRR25434634	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG20 replicate 3	ILLUMINA	8673532412 bp
SRR25434635	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG20 replicate 2	ILLUMINA	8267660116 bp
SRR25434636	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG20 replicate 1	ILLUMINA	8336279952 bp
SRR25434637	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG16 replicate 3	ILLUMINA	7423348146 bp
SRR25434638	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG16 replicate 2	ILLUMINA	8643280468 bp
SRR25434639	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG16 replicate 1	ILLUMINA	8311107648 bp
SRR25434640	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG12 replicate 3	ILLUMINA	8250825428 bp
SRR25434641	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG12 replicate 2	ILLUMINA	8097795686 bp
SRR25434642	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG12 replicate 1	ILLUMINA	9475072726 bp
SRR25434643	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG10 replicate 3	ILLUMINA	8398228004 bp
SRR25434644	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK8 replicate 3	ILLUMINA	8707333460 bp
SRR25434645	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG10 replicate 2	ILLUMINA	8237586352 bp
SRR25434646	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG10 replicate 1	ILLUMINA	7901713730 bp
SRR25434647	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG8 replicate 3	ILLUMINA	8865190974 bp
SRR25434648	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG8 replicate 2	ILLUMINA	8580898744 bp
SRR25434649	RNA-Seq of Metasequoia glyptostroboides: stem from China, MG8 replicate 1	ILLUMINA	7417121812 bp
SRR25434650	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK20 replicate 3	ILLUMINA	9594162198 bp
SRR25434651	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK20 replicate 2	ILLUMINA	8882885758 bp
SRR25434652	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK20 replicate 1	ILLUMINA	8768330212 bp
SRR25434653	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK16 replicate 3	ILLUMINA	8448000322 bp
SRR25434654	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK16 replicate 2	ILLUMINA	10589851970 bp
SRR25434655	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK8 replicate 2	ILLUMINA	8776051446 bp
SRR25434656	RNA-Seq of Metasequoia glyptostroboides: stem from China, CK8 replicate 1	ILLUMINA	9072430018 bp

Species Info.

Omics Data

Omics Analysis

Seq. Analysis

Omics Analysis

Others

Project