Omics-Seq

Bioproject

Description

Publication

GVCF File

Library Num.

The degradome sequencing of Pepper Fruit to enable identification of cleavage, sites from the miRNAs targets

Library	Title	Platform	Total Base	VCF File
SRR21494653	RNA-Seq of Piper nigrum: fruit development stage 120 days plant with unripe fruit from India: Thiruvananthapuram, Panniyur-1, pepper_fruit	ILLUMINA	3269975240 bp

Fruit transcriptome was done in order to understand the genes involved in the natural product biosynthesis.

Library	Title	Platform	Total Base	VCF File
SRR21197322	RNA-Seq of Piper nigrum: 120 days fruit development stage plant with unripe fruit from India: Thiruvananthapuram, Panniyur-1, Pepper_unripe_fruit	ILLUMINA	9368882098 bp

Piper nigrum cultivar: IISR Thevam Transcriptome or Gene expression

Library	Title	Platform	Total Base	VCF File
SRR12518068	RNA-Seq of Piper nigrum: half matured berry from India: Kerala\, Kozhikode, Thevam, PNTIISR	ILLUMINA	318419488 bp

Black pepper (Piper nigrum L.) leaf transcriptome from India

Library	Title	Platform	Total Base	VCF File
SRR8446741	RNA-Seq of Piper nigrum: six-month-old cutting plant with leaf from India:Kerala, Genotype 4226, BP-T, BP-T	ILLUMINA	4016410238 bp
SRR8446742	RNA-Seq of Piper nigrum: six-month-old cutting plant with leaf from India:Kerala, Genotype 4226, BP-C, BP-C	ILLUMINA	3312114614 bp