Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
Others

Project

Bioproject Description Publication GVCF File Library Num.
PRJNA498605 The comprehensive variations among three Taxaceae trees, including one taxol-producing (TP) and two non-taxol producing (NTP) trees, were compared -
337
Library Title Platform Total Base VCF File
SRR8113476 RNA-Seq of Torreya grandis: three years non-taxol producing (NTP) tree with fresh twigs (wood+needles), GSM3447570 ILLUMINA 7136219786 bp
SRR8113477 RNA-Seq of Torreya grandis: three years non-taxol producing (NTP) tree with fresh twigs (wood+needles), GSM3447573 ILLUMINA 6477398513 bp
SRR8113478 RNA-Seq of Torreya grandis: three years non-taxol producing (NTP) tree with fresh twigs (wood+needles), GSM3447575 ILLUMINA 6130224503 bp
PRJNA672806 Transcriptome data from three typical stages of Torreya grandis seed development Zhang et al., 2022
338
Library Title Platform Total Base VCF File
SRR12964406 RNA-Seq of Torreya grandis: the late stage of material transformation seed from China, Merrillii, Stage2-1 ILLUMINA 8208003600 bp
SRR12964411 RNA-Seq of Torreya grandis: the mature stage seed from China, Merrillii, Stage3-2 ILLUMINA 8771940300 bp
SRR12964412 RNA-Seq of Torreya grandis: the mature stage seed from China, Merrillii, Stage3-1 ILLUMINA 9188593800 bp
SRR12964413 RNA-Seq of Torreya grandis: the late stage of material transformation seed from China, Merrillii, Stage2-3 ILLUMINA 8866301400 bp
SRR12964407 RNA-Seq of Torreya grandis: early stage of material transformation seed from China, Merrillii, Stage1-3 ILLUMINA 8575797000 bp
SRR12964408 RNA-Seq of Torreya grandis: early stage of material transformation seed from China, Merrillii, Stage1-2 ILLUMINA 8760990600 bp
SRR12964409 RNA-Seq of Torreya grandis: early stage of material transformation seed from China, Merrillii, Stage1-1 ILLUMINA 8752442700 bp
SRR12964410 RNA-Seq of Torreya grandis: the mature stage seed from China, Merrillii, Stage3-3 ILLUMINA 8788404000 bp
SRR12964414 RNA-Seq of Torreya grandis: the late stage of material transformation seed from China, Merrillii, Stage2-2 ILLUMINA 9065566500 bp
PRJNA687396 Transcriptomics combined with physiological approaches was used to explore the mechanism of the yellow leaf mutant Torreya grandis ‘Merrillii’. Shen et al., 2022
339
Library Title Platform Total Base VCF File
SRR13307831 RNA-Seq of Torreya grandis: 2 years mutant plant with yellow leaves from China: Zhejiang, Y2 ILLUMINA 11240269200 bp
SRR13307832 RNA-Seq of Torreya grandis: 2 years mutant plant with yellow leaves from China: Zhejiang, Y1 ILLUMINA 11609429700 bp
SRR13307833 RNA-Seq of Torreya grandis: 2 years wild plant with green leaves from China: Zhejiang, G3 ILLUMINA 11274171300 bp
SRR13307834 RNA-Seq of Torreya grandis: 2 years wild plant with green leaves from China: Zhejiang, G2 ILLUMINA 11412141900 bp
SRR13307835 RNA-Seq of Torreya grandis: 2 years wild plant with green leaves from China: Zhejiang, G1 ILLUMINA 11437615200 bp
SRR13307836 RNA-Seq of Torreya grandis: 2 years mutant plant with yellow leaves from China: Zhejiang, Y3 ILLUMINA 11425175100 bp
PRJNA765927 Torreya grandis Raw sequence reads -
340
Library Title Platform Total Base VCF File
SRR16069247 RNA-Seq of Torreya grandis: 141 days after seeds protrusion plant with aril, Merrillii, 141DASP-3 ILLUMINA 11275771886 bp
SRR16069248 RNA-Seq of Torreya grandis: 141 days after seeds protrusion plant with aril, Merrillii, 141DASP-2 ILLUMINA 12177819310 bp
SRR16069249 RNA-Seq of Torreya grandis: 141 days after seeds protrusion plant with aril, Merrillii, 141DASP-1 ILLUMINA 11484463248 bp
SRR16069250 RNA-Seq of Torreya grandis: 96 days after seeds protrusion plant with aril, Merrillii, 96DASP-3 ILLUMINA 13670120902 bp
SRR16069251 RNA-Seq of Torreya grandis: 96 days after seeds protrusion plant with aril, Merrillii, 96DASP-2 ILLUMINA 12557611792 bp
SRR16069252 RNA-Seq of Torreya grandis: 96 days after seeds protrusion plant with aril, Merrillii, 96DASP-1 ILLUMINA 13500582632 bp
PRJNA815869 The effects of strigolactone on genetic responses of Torreya grandis, under simulated nitrogen deposition were explored using high-throughput sequencing techniques Yu et al., 2022
341
Library Title Platform Total Base VCF File
SRR18320943 RNA-Seq of Torreya grandis: control replicate3 treatment treatment 1 year plant with leaves from China: linan, Merrillii, CK3 ILLUMINA 6963049800 bp
SRR18320944 RNA-Seq of Torreya grandis: nitrogen+GR24 treated for 72h replicate3 treatment 1 year plant with leaves from China: linan, Merrillii, N+GR72_3 ILLUMINA 6043980600 bp
SRR18320945 RNA-Seq of Torreya grandis: nitrogen treated for 24h replicate1 treatment 1 year plant with leaves from China: linan, Merrillii, N24_1 ILLUMINA 6818433000 bp
SRR18320946 RNA-Seq of Torreya grandis: nitrogen treated for 24h replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, N24_2 ILLUMINA 6773355300 bp
SRR18320947 RNA-Seq of Torreya grandis: nitrogen treated for 24h replicate3 treatment 1 year plant with leaves from China: linan, Merrillii, N24_3 ILLUMINA 6927167100 bp
SRR18320948 RNA-Seq of Torreya grandis: GR24treated for 24h replicate1 treatment 1 year plant with leaves from China: linan, Merrillii, GR24_1 ILLUMINA 6314249100 bp
SRR18320949 RNA-Seq of Torreya grandis: GR24treated for 24h replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, GR24_2 ILLUMINA 6439705500 bp
SRR18320950 RNA-Seq of Torreya grandis: nitrogen+GR24 treated for 24h replicate1 treatment 1 year plant with leaves from China: linan, Merrillii, N+GR24_1 ILLUMINA 6164249100 bp
SRR18320951 RNA-Seq of Torreya grandis: GR24treated for 24h replicate3 treatment 1 year plant with leaves from China: linan, Merrillii, GR24_3 ILLUMINA 6787231800 bp
SRR18320952 RNA-Seq of Torreya grandis: nitrogen+GR24 treated for 72h replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, N+GR72_2 ILLUMINA 6331219500 bp
SRR18320953 RNA-Seq of Torreya grandis: nitrogen+GR24 treated for 72h replicate1 treatment 1 year plant with leaves from China: linan, Merrillii, N+GR72_1 ILLUMINA 6411328800 bp
SRR18320954 RNA-Seq of Torreya grandis: GR24treated for 72h replicate3 treatment 1 year plant with leaves from China: linan, Merrillii, GR72_3 ILLUMINA 6792469800 bp
SRR18320955 RNA-Seq of Torreya grandis: GR24treated for 72h replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, GR72_2 ILLUMINA 6707294100 bp
SRR18320956 RNA-Seq of Torreya grandis: GR24treated for 72h replicate1 treatment 1 year plant with leaves from China: linan, Merrillii, GR72_1 ILLUMINA 6086581200 bp
SRR18320957 RNA-Seq of Torreya grandis: nitrogen treated for 72h replicate3 treatment 1 year plant with leaves from China: linan, Merrillii, N72_3 ILLUMINA 6711111900 bp
SRR18320958 RNA-Seq of Torreya grandis: nitrogen treated for 72h replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, N72_2 ILLUMINA 6950114400 bp
SRR18320959 RNA-Seq of Torreya grandis: nitrogen treated for 72h replicate1 treatment 1 year plant with leaves from China: linan, Merrillii, N72_1 ILLUMINA 6139903800 bp
SRR18320960 RNA-Seq of Torreya grandis: nitrogen+GR24 treated for 24h replicate3 treatment 1 year plant with leaves from China: linan, Merrillii, N+GR24_3 ILLUMINA 6540613200 bp
SRR18320961 RNA-Seq of Torreya grandis: nitrogen+GR24 treated for 24h replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, N+GR24_2 ILLUMINA 6415764000 bp
SRR18320962 RNA-Seq of Torreya grandis: control replicate2 treatment 1 year plant with leaves from China: linan, Merrillii, CK2 ILLUMINA 6678320400 bp
PRJNA924964 Transcriptome data of Torreya grandis seedlings -
342
Library Title Platform Total Base VCF File
SRR23105320 RNA-Seq of Torreya grandis: leaf, D60-3 ILLUMINA 6898422300 bp
SRR23105321 RNA-Seq of Torreya grandis: leaf, D60-2 ILLUMINA 7120742100 bp
SRR23105322 RNA-Seq of Torreya grandis: leaf, D60-1 ILLUMINA 6591408600 bp
SRR23105323 RNA-Seq of Torreya grandis: leaf, D40-3 ILLUMINA 7201698600 bp
SRR23105324 RNA-Seq of Torreya grandis: leaf, D40-2 ILLUMINA 6798465000 bp
SRR23105325 RNA-Seq of Torreya grandis: leaf, D40-1 ILLUMINA 7088107500 bp
SRR23105326 RNA-Seq of Torreya grandis: leaf, CK-3 ILLUMINA 6940029600 bp
SRR23105327 RNA-Seq of Torreya grandis: leaf, CK-2 ILLUMINA 7032613950 bp
SRR23105328 RNA-Seq of Torreya grandis: leaf, CK-1 ILLUMINA 6338467500 bp

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