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Bioproject Description Publication GVCF File Library Num.
PRJNA273272 Sugar Maple transcriptome sequencing from a abiotic stress-exposed seedlings Harmon et al., 2017
52
Library Title Platform Total Base VCF File
SRR3486423 RNA-Seq of Acer saccharum: treated by ambient various abiotic stressors seedling plant with various provided by Scott Schlarbaum\, University of Tennessee, open pollinated seeds collected from campus tree at University of Missouri, SM1 ILLUMINA 482503555 bp
SRR3486425 RNA-Seq of Acer saccharum: treated by ambient ozone (80ppb) seedling plant with leaf provided by Scott Schlarbaum\, University of Tennessee, open pollinated seeds collected from campus tree at University of Missouri, SM80 ILLUMINA 1082886681 bp
SRR3486426 RNA-Seq of Acer saccharum: treated by ambient ozone (10ppb) seedling plant with leaf provided by Scott Schlarbaum\, University of Tennessee, open pollinated seeds collected from campus tree at University of Missouri, SMCO ILLUMINA 1160544940 bp
SRR3486438 RNA-Seq of Acer saccharum: treated by ambient ozone (125ppb) seedling plant with leaf provided by Scott Schlarbaum\, University of Tennessee, open pollinated seeds collected from campus tree at University of Missouri, SM125 ILLUMINA 1174821152 bp
SRR3486439 RNA-Seq of Acer saccharum: treated by ambient ozone (225ppb) seedling plant with leaf provided by Scott Schlarbaum\, University of Tennessee, open pollinated seeds collected from campus tree at University of Missouri, SM225 ILLUMINA 1245227243 bp
SRR1778869 RNA-Seq of Acer saccharum: treated by ambient ozone (125ppb) 14 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-125-14 ILLUMINA 523005674 bp
SRR1778870 RNA-Seq of Acer saccharum: treated by ambient ozone (125ppb) 28 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-125-28 ILLUMINA 710269774 bp
SRR1778871 RNA-Seq of Acer saccharum: treated by ambient ozone (125ppb) 7 hours seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-125-7 ILLUMINA 552734418 bp
SRR1778872 RNA-Seq of Acer saccharum: treated by ambient ozone (225ppb) 14 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-225-14 ILLUMINA 676390536 bp
SRR1778873 RNA-Seq of Acer saccharum: treated by ambient ozone (225ppb) 28 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-225-28 ILLUMINA 427517648 bp
SRR1778874 RNA-Seq of Acer saccharum: treated by ambient ozone (225ppb) 7 hours seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-225-7 ILLUMINA 555636754 bp
SRR1778875 RNA-Seq of Acer saccharum: treated by ambient ozone (80ppb) 14 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-80-14 ILLUMINA 463667568 bp
SRR1778876 RNA-Seq of Acer saccharum: treated by ambient ozone (80ppb) 28 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-80-28 ILLUMINA 529972856 bp
SRR1778877 RNA-Seq of Acer saccharum: treated by ambient ozone (80ppb) 7 hours seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-80-7 ILLUMINA 495799102 bp
SRR1778878 RNA-Seq of Acer saccharum: treated by ambient ozone (10ppb) 14 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-CO-14 ILLUMINA 545128108 bp
SRR1778879 RNA-Seq of Acer saccharum: treated by ambient ozone (10ppb) 28 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-CO-28 ILLUMINA 647321928 bp
SRR1778880 RNA-Seq of Acer saccharum: treated by ambient ozone (10ppb) 7 hours seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SM-CO-7 ILLUMINA 579180460 bp
SRR1778881 RNA-Seq of Acer saccharum: treated by 4C 24 hours cold (4C) seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCOLD24L ILLUMINA 494424694 bp
SRR1778882 RNA-Seq of Acer saccharum: treated by 4C 24 hours cold (4C) seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCOLD24P ILLUMINA 521298572 bp
SRR1778883 RNA-Seq of Acer saccharum: treated by 4C 24 hours cold (4C) seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCOLD24R ILLUMINA 412009906 bp
SRR1778884 RNA-Seq of Acer saccharum: treated by 4C 4 hours cold (4C) seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCOLD4L ILLUMINA 511436326 bp
SRR1778885 RNA-Seq of Acer saccharum: treated by 4C 4 hours cold (4C) seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCOLD4P ILLUMINA 492709310 bp
SRR1778886 RNA-Seq of Acer saccharum: treated by 4C 4 hours cold (4C) seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCOLD4R ILLUMINA 719744786 bp
SRR1778887 RNA-Seq of Acer saccharum: treated by ambient none (control 1) seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCTRLAL ILLUMINA 489118356 bp
SRR1778888 RNA-Seq of Acer saccharum: treated by ambient none (control 1) seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCTRLAP ILLUMINA 460169130 bp
SRR1778889 RNA-Seq of Acer saccharum: treated by ambient none (control 1) seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCTRLAR ILLUMINA 420075160 bp
SRR1778890 RNA-Seq of Acer saccharum: treated by ambient none (control 2) seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCTRLBL ILLUMINA 452283454 bp
SRR1778891 RNA-Seq of Acer saccharum: treated by ambient none (control 2) seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCTRLBP ILLUMINA 689057350 bp
SRR1778892 RNA-Seq of Acer saccharum: treated by ambient none (control 2) seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMCTRLBR ILLUMINA 512520460 bp
SRR1778893 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 21 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT21DL ILLUMINA 466567076 bp
SRR1778894 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 21 days seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT21DP ILLUMINA 539246070 bp
SRR1778895 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 21 days seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT21DR ILLUMINA 544900858 bp
SRR1778896 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 32 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT32DL ILLUMINA 476221868 bp
SRR1778897 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 32 days seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT32DP ILLUMINA 526461288 bp
SRR1778898 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 32 days seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT32DR ILLUMINA 570370028 bp
SRR1778899 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 7 days seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT7DL ILLUMINA 452090544 bp
SRR1778900 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 7 days seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT7DP ILLUMINA 479397308 bp
SRR1778901 RNA-Seq of Acer saccharum: treated by ambient drought (<1.0mpa) 7 days seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMDRHT7DR ILLUMINA 541128104 bp
SRR1778902 RNA-Seq of Acer saccharum: treated by 40C heat (40C) 24 hours seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMHEAT24L ILLUMINA 484717786 bp
SRR1778903 RNA-Seq of Acer saccharum: treated by 40C heat (40C) 24 hours seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMHEAT24P ILLUMINA 672064504 bp
SRR1778904 RNA-Seq of Acer saccharum: treated by 40C heat (40C) 24 hours seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMHEAT24R ILLUMINA 444231128 bp
SRR1778905 RNA-Seq of Acer saccharum: treated by 40C heat (40C) 4 hours seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMHEAT4L ILLUMINA 590659312 bp
SRR1778906 RNA-Seq of Acer saccharum: treated by 40C heat (40C) 4 hours seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMHEAT4P ILLUMINA 553875920 bp
SRR1778907 RNA-Seq of Acer saccharum: treated by 40C heat (40C) 4 hours seedling plant with root provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMHEAT4R ILLUMINA 661201752 bp
SRR1778908 RNA-Seq of Acer saccharum: treated by ambient 0 hours after hole punch wounding seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMWND0L ILLUMINA 537055582 bp
SRR1778909 RNA-Seq of Acer saccharum: treated by ambient 24 hours after hole punch wounding seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMWD24L ILLUMINA 611347344 bp
SRR1778910 RNA-Seq of Acer saccharum: treated by ambient 24 hours after hole punch wounding seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMW24P ILLUMINA 628486438 bp
SRR1778911 RNA-Seq of Acer saccharum: treated by ambient 3 hours after hole punch wounding seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMWND3L ILLUMINA 523374930 bp
SRR1778912 RNA-Seq of Acer saccharum: treated by ambient 3 hours after hole punch wounding seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMWND3P ILLUMINA 514613180 bp
SRR1778913 RNA-Seq of Acer saccharum: treated by ambient 5 hours after hole punch wounding seedling plant with leaf provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMWND5L ILLUMINA 483445994 bp
SRR1778914 RNA-Seq of Acer saccharum: treated by ambient 5 hours after hole punch wounding seedling plant with petiole provided by Mark Coggeshall\, University of Missouri, open pollinated seeds collected from campus tree at University of Missouri, SMWND5P ILLUMINA 572391644 bp
SRR3486424 RNA-Seq of Acer saccharum: treated by ambient various abiotic stressors seedling plant with various provided by Scott Schlarbaum\, University of Tennessee, open pollinated seeds collected from campus tree at University of Missouri, SM1 ILLUMINA 472201112 bp
PRJNA413418 Community Transcriptomics of Wabikon Lake Forest Dynamics Plot, Wisconsin, U.S.A. Zhang et al., 2021
9
Library Title Platform Total Base VCF File
SRR6134136 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII9A_2.fq.gz, NGS_WL_60 ILLUMINA 4383444600 bp
SRR6134138 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII49A_2.fq.gz, NGS_WL_56 ILLUMINA 4293013200 bp
SRR6134139 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII50A_2.fq.gz, NGS_WL_57 ILLUMINA 4242958000 bp
SRR6134140 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII6A_2.fq.gz, NGS_WL_58 ILLUMINA 4299797400 bp
SRR6134141 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII8A_2.fq.gz, NGS_WL_59 ILLUMINA 4294363800 bp
SRR6134142 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII13A_2.fq.gz, NGS_WL_52 ILLUMINA 4237844200 bp
SRR6134143 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII17A_2.fq.gz, NGS_WL_53 ILLUMINA 4285614000 bp
SRR6134144 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII25A_2.fq.gz, NGS_WL_54 ILLUMINA 3877709400 bp
SRR6134145 RNA-Seq of Acer saccharum: 1 year plant with leaf from USA: Michigan, ASII29A_2.fq.gz, NGS_WL_55 ILLUMINA 4228757400 bp
PRJNA751902 RNA-seq from trees grown in long-term calcium amended, aluminum amended, and control plots at the Hubbard Brook Experimental Forest McEvoy et al., 2021
16
Library Title Platform Total Base VCF File
SRR17316420 RNA-Seq of Acer saccharum: aluminum plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsAl1 ILLUMINA 2116186162 bp
SRR17316421 RNA-Seq of Acer saccharum: sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsCo3 ILLUMINA 1762410878 bp
SRR17316422 RNA-Seq of Acer saccharum: sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsCo2 ILLUMINA 1677933633 bp
SRR17316423 RNA-Seq of Acer saccharum: sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsCo1 ILLUMINA 2107673316 bp
SRR17316424 RNA-Seq of Acer saccharum: calcium plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsCa3 ILLUMINA 1719892389 bp
SRR17316425 RNA-Seq of Acer saccharum: calcium plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsCa2 ILLUMINA 1929295066 bp
SRR17316426 RNA-Seq of Acer saccharum: calcium plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsCa1 ILLUMINA 2076579406 bp
SRR17316427 RNA-Seq of Acer saccharum: aluminum plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsAl3 ILLUMINA 1734483338 bp
SRR17316428 RNA-Seq of Acer saccharum: sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsCo3 ILLUMINA 1888087960 bp
SRR17316429 RNA-Seq of Acer saccharum: sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsCo2 ILLUMINA 2076770363 bp
SRR17316430 RNA-Seq of Acer saccharum: sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsCo1 ILLUMINA 1857275766 bp
SRR17316431 RNA-Seq of Acer saccharum: calcium plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsCa2 ILLUMINA 1383959360 bp
SRR17316432 RNA-Seq of Acer saccharum: calcium plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsCa1 ILLUMINA 2776154364 bp
SRR17316433 RNA-Seq of Acer saccharum: aluminum plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, SpAsAl2 ILLUMINA 2117120511 bp
SRR17316434 RNA-Seq of Acer saccharum: aluminum plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsAl2 ILLUMINA 2178009520 bp
SRR17316435 RNA-Seq of Acer saccharum: aluminum plots sapling plant with stem from USA: New Hampshire located in Hubbard Brook Experimental Forest, FaAsAl1 ILLUMINA 1899474186 bp
PRJNA895722 Transcriptome, Physiological, and Biochemical Analyses of Sugar Maple (Acer saccharum Marshall) Saplings in Response to Drought Stress -
16
Library Title Platform Total Base VCF File
SRR22096743 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 14D-5 ILLUMINA 5427201000 bp
SRR22096744 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 14D-3 ILLUMINA 5615189700 bp
SRR22096745 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 7D-7 ILLUMINA 4726668300 bp
SRR22096746 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 7D-6 ILLUMINA 6616429800 bp
SRR22096747 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 7D-3 ILLUMINA 6321992400 bp
SRR22096748 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 7D-2 ILLUMINA 9048208800 bp
SRR22096749 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, C-6 ILLUMINA 5235448800 bp
SRR22096750 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, C-5 ILLUMINA 5707929000 bp
SRR22096751 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 21D-7 ILLUMINA 13669701900 bp
SRR22096752 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 21D-6 ILLUMINA 7035428400 bp
SRR22096753 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 21D-5 ILLUMINA 8556432600 bp
SRR22096754 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 21D-3 ILLUMINA 7809387300 bp
SRR22096755 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 14D-7 ILLUMINA 14417895000 bp
SRR22096756 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, 14D-6 ILLUMINA 4811030700 bp
SRR22096757 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, C-2 ILLUMINA 5294386800 bp
SRR22096758 RNA-Seq of Acer saccharum: seedling plant with leaf from USA, C-1 ILLUMINA 8278845600 bp
PRJNA896247 RNA-Seq of Acer saccharum Lu et al., 2023
1
Library Title Platform Total Base VCF File
SRR22133662 RNA-Seq of Acer saccharum: leaf from USA: the University of Notre Dame Environmental Research Center, NG41 ILLUMINA 6038760600 bp

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