Omics-Seq

Project

Bioproject

Description

Publication

GVCF File

Library Num.

PRJNA342905

Pecan female and male inflorescences transcriptome sequencing.

Jia et al., 2018

Library	Title	Platform	Total Base	VCF File
SRR4268411	RNA-Seq of Carya illinoinensis: 4 years plant with male inflorescences, xiong	ILLUMINA	1600000000 bp
SRR4268410	RNA-Seq of Carya illinoinensis: 5 years plant with female inflorescences, ci1-1	ILLUMINA	1600000000 bp

PRJNA347430

Pecan kernel transcriptome sequencing.

Library	Title	Platform	Total Base
SRR4393209	RNA-Seq of Carya illinoinensis: 8 years plant with kernel, pecan, PK0825	ILLUMINA	6354599800 bp
SRR4393210	RNA-Seq of Carya illinoinensis: 8 years plant with kernel, pecan, PK0914	ILLUMINA	6646872400 bp
SRR4393211	RNA-Seq of Carya illinoinensis: 8 years plant with kernel, pecan, PK0924	ILLUMINA	5757689000 bp
SRR4393212	RNA-Seq of Carya illinoinensis: 8 years plant with kernel, pecan, PK1014	ILLUMINA	6074102600 bp

PRJNA360120

RNA-seq analysis of developing pecan (Carya illinoinensis) embryo.

Mattison et al., 2017

Library	Title	Platform	Total Base
SRR5714439	RNA-Seq of Carya illinoinensis: mature stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4552_9-20-13-BR1_GGCTAC_L008_R1.fastq.gz	ILLUMINA	5698890458 bp
SRR5714441	RNA-Seq of Carya illinoinensis: late water stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4546_8-11-12-BR1_ACAGTG_L007_R1.fastq.gz	ILLUMINA	4006817864 bp
SRR5714443	RNA-Seq of Carya illinoinensis: mature stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4545_9-20-12-BR3_TGACCA_L007_R1.fastq.gz	ILLUMINA	3128089584 bp
SRR5714438	RNA-Seq of Carya illinoinensis: dough stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4550_9-4-12-BR2_GATCAG_L008_R1.fastq.gz	ILLUMINA	4156210600 bp
SRR5714442	RNA-Seq of Carya illinoinensis: dough stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4544_9-4-12-BR1_TTAGGC_L007_R1.fastq.gz	ILLUMINA	3617495588 bp
SRR5714435	RNA-Seq of Carya illinoinensis: late water stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4547_8-11-12-BR2_GCCAAT_L007_R1.fastq.gz	ILLUMINA	3254160410 bp
SRR5714437	RNA-Seq of Carya illinoinensis: gel stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4549_8-23-12-BR3_ACTTGA_L008_R1.fastq.gz	ILLUMINA	4574040732 bp
SRR5714440	RNA-Seq of Carya illinoinensis: mature stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4553_9-20-13-BR2_CTTGTA_L008_R1.fastq.gz	ILLUMINA	5390017106 bp
SRR5714445	RNA-Seq of Carya illinoinensis: gel stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4543_8-23-12-BR1_CGATGT_L007_R1.fastq.gz	ILLUMINA	16263230484 bp
SRR5714434	RNA-Seq of Carya illinoinensis: dough stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4551_9-4-13-BR3_TAGCTT_L008_R1.fastq.gz	ILLUMINA	6130447298 bp
SRR5714436	RNA-Seq of Carya illinoinensis: late water stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4548_8-11-12-BR3_CAGATC_L008_R1.fastq.gz	ILLUMINA	5702683008 bp
SRR5714444	RNA-Seq of Carya illinoinensis: late water stage nut embryo from USA: Shreveport\, LA, Sumner, GRL4542_8-11-12-BR2_ATCACG_L007_R1.fastq.gz	ILLUMINA	4499708570 bp

PRJNA411951

Transcritomic analysis of graft union in response to grafting, aim to reveal genes involved in graft union development.

Mo et al., 2018

Library	Title	Platform	Total Base
SRR6065910	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 30 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-30d-3	ILLUMINA	7374588882 bp
SRR6065911	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 30 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-30d-2	ILLUMINA	8298213696 bp
SRR6065912	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 15 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-15d-2	ILLUMINA	7663252898 bp
SRR6065913	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 15 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-15d-1	ILLUMINA	8184589542 bp
SRR6065914	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 8 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-8d-3	ILLUMINA	6719945654 bp
SRR6065915	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 8 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-8d-2	ILLUMINA	8714181422 bp
SRR6065916	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 8 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-8d-1	ILLUMINA	7273635868 bp
SRR6065917	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 0 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-0d-3	ILLUMINA	7880298088 bp
SRR6065918	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 0 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-0d-2	ILLUMINA	7759244846 bp
SRR6065919	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 0 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-0d-1	ILLUMINA	7691375162 bp
SRR6065920	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 30 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-30d-1	ILLUMINA	7695834880 bp
SRR6065921	RNA-Seq of Carya illinoinensis: 2 years (stock) and current season (scion) 15 days after grafting budding segment that includes the tissues of scion and the developing xylem of rootstock from China: Nanjing, Pawnee (scion) and pecan seeding (stock), Pecan-graft union-15d-3	ILLUMINA	7962643828 bp

PRJNA431042

Carya illinoinensis cultivar:Annong3 Transcriptome or Gene expression.

Library	Title	Platform	Total Base
SRR6505175	RNA-Seq of Carya illinoinensis: initiate stage1 seed from China: Anhui, Annong3, PA1	BGISEQ	5436894600 bp
SRR6505176	RNA-Seq of Carya illinoinensis: initiate stage2 seed from China: Anhui, Annong3, PA2	BGISEQ	5365000500 bp
SRR6505177	RNA-Seq of Carya illinoinensis: initiate stage3 seed from China: Anhui, Annong3, PA3	BGISEQ	5426776800 bp
SRR6505178	RNA-Seq of Carya illinoinensis: fast oil accumulation stage1 seed from China: Anhui, Annong3, PS1	BGISEQ	5363414400 bp
SRR6505179	RNA-Seq of Carya illinoinensis: fast oil accumulation stage2 seed from China: Anhui, Annong3, PS2	BGISEQ	5121403500 bp
SRR6505180	RNA-Seq of Carya illinoinensis: fast oil accumulation stage3 seed from China: Anhui, Annong3, PS3	BGISEQ	5061141300 bp
SRR6505181	RNA-Seq of Carya illinoinensis: all stages seed from China: Anhui, Annong3, PM	BGISEQ	5513800800 bp

PRJNA504494

The transcriptomes of four development stages (late water, gel, dough and mature stages) of kernels were reported here.

Yang et al., 2022

Library	Title	Platform	Total Base
SRR8173526	RNA-Seq of Carya illinoinensis: 10 years dough stage plant with embryo from China: Jiande field experimental station, YLC28, NAsD	ILLUMINA	21001061231 bp
SRR8173527	RNA-Seq of Carya illinoinensis: 10 years mature stage plant with embryo from China: Jiande field experimental station, YLC28, NAsM	ILLUMINA	17566496744 bp
SRR8173528	RNA-Seq of Carya illinoinensis: 10 years late water stage plant with embryo from China: Jiande field experimental station, YLC28, NAsW	ILLUMINA	22154049669 bp
SRR8173529	RNA-Seq of Carya illinoinensis: 10 years gel stage plant with embryo from China: Jiande field experimental station, YLC28, NAsG	ILLUMINA	23394319913 bp

PRJNA533506

Transcriptome Analysis of Pistillate Flowering in Pecan (Carya illinoinensis).

Wang et al., 2019

Library	Title	Platform	Total Base
SRR8925828	RNA-Seq of Carya illinoinensis: 9 years the female flower primordium continues plant with bud from China: Nanjing, Pawnee, Pecan-female flower-FB3-1	ILLUMINA	8335297546 bp
SRR8925829	RNA-Seq of Carya illinoinensis: 9 years the female flower primordium continues plant with bud from China: Nanjing, Pawnee, Pecan-female flower-FB3-2	ILLUMINA	7733955448 bp
SRR8925830	RNA-Seq of Carya illinoinensis: 9 years the early blooming stage plant with flower from China: Nanjing, Pawnee, Pecan-female flower-FL1-1	ILLUMINA	7741295256 bp
SRR8925831	RNA-Seq of Carya illinoinensis: 9 years the early blooming stage plant with flower from China: Nanjing, Pawnee, Pecan-female flower-FL1-2	ILLUMINA	9522545314 bp
SRR8925832	RNA-Seq of Carya illinoinensis: 9 years initial stage of flower bud differentiation plant with bud from China: Nanjing, Pawnee, Pecan-female flower-FB1-1	ILLUMINA	8915777786 bp
SRR8925833	RNA-Seq of Carya illinoinensis: 9 years initial stage of flower bud differentiation plant with bud from China: Nanjing, Pawnee, Pecan-female flower-FB1-2	ILLUMINA	9081802588 bp
SRR8925834	RNA-Seq of Carya illinoinensis: 9 years the inflorescence formation stage plant with bud from China: Nanjing, Pawnee, Pecan-female flower-FB2-1	ILLUMINA	8318194380 bp
SRR8925835	RNA-Seq of Carya illinoinensis: 9 years the inflorescence formation stage plant with bud from China: Nanjing, Pawnee, Pecan-female flower-FB2-2	ILLUMINA	8529015748 bp
SRR8925836	RNA-Seq of Carya illinoinensis: 9 years the full blooming stage plant with flower from China: Nanjing, Pawnee, Pecan-female flower-Fl2-1	ILLUMINA	7450682770 bp
SRR8925837	RNA-Seq of Carya illinoinensis: 9 years the full blooming stage plant with flower from China: Nanjing, Pawnee, Pecan-female flower-Fl2-2	ILLUMINA	8441949450 bp

PRJNA589673

The transcriptome analysis was performed for the Pecan response to salt stress (3% and 6% NaCl) applied for different times.

Zhang et al., 2021

Library	Title	Platform	Total Base
SRR10445724	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10301	ILLUMINA	8216353200 bp
SRR10445725	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30003	ILLUMINA	7641450300 bp
SRR10445726	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30002	ILLUMINA	6884175600 bp
SRR10445727	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30001	ILLUMINA	7928978700 bp
SRR10445728	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20003	ILLUMINA	7751374200 bp
SRR10445729	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20002	ILLUMINA	5790880500 bp
SRR10445730	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20001	ILLUMINA	8069755200 bp
SRR10445731	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10903	ILLUMINA	5595902700 bp
SRR10445732	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10902	ILLUMINA	8026207200 bp
SRR10445733	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10901	ILLUMINA	9449334900 bp
SRR10445734	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30603	ILLUMINA	7010594400 bp
SRR10445735	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30602	ILLUMINA	7742893500 bp
SRR10445736	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30601	ILLUMINA	6124984500 bp
SRR10445737	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20603	ILLUMINA	7316328900 bp
SRR10445738	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20602	ILLUMINA	8039449800 bp
SRR10445739	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20601	ILLUMINA	6727454400 bp
SRR10445740	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10603	ILLUMINA	8531715000 bp
SRR10445741	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10003	ILLUMINA	7863357900 bp
SRR10445742	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10602	ILLUMINA	8262045900 bp
SRR10445743	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10601	ILLUMINA	7751997600 bp
SRR10445744	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30303	ILLUMINA	6935597400 bp
SRR10445745	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30302	ILLUMINA	8048427900 bp
SRR10445746	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 30301	ILLUMINA	8414860500 bp
SRR10445747	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20303	ILLUMINA	6510150300 bp
SRR10445748	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20302	ILLUMINA	7716396600 bp
SRR10445749	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 20301	ILLUMINA	8164917900 bp
SRR10445750	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10303	ILLUMINA	7409114700 bp
SRR10445751	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10302	ILLUMINA	8117025900 bp
SRR10445752	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10002	ILLUMINA	6033763500 bp
SRR10445753	RNA-Seq of Carya illinoinensis: less than 1 year seedling with leaf from China: Ningbo, Pawnee, 10001	ILLUMINA	7502376000 bp

PRJNA743302

Pecan kinome: classification and expression analysis of all protein kinases in Carya illinoinensis.

Zhu et al., 2022

Library	Title	Platform	Total Base
SRR15027054	RNA-Seq of Carya illinoinensis: untreated seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415578	ILLUMINA	7590517800 bp
SRR15027055	RNA-Seq of Carya illinoinensis: untreated seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415579	ILLUMINA	5500248000 bp
SRR15027056	RNA-Seq of Carya illinoinensis: untreated seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415580	ILLUMINA	6111410700 bp
SRR15027057	RNA-Seq of Carya illinoinensis: drought treated for 3 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415581	ILLUMINA	6153478500 bp
SRR15027058	RNA-Seq of Carya illinoinensis: drought treated for 3 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415582	ILLUMINA	5598653400 bp
SRR15027059	RNA-Seq of Carya illinoinensis: drought treated for 3 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415583	ILLUMINA	6354411600 bp
SRR15027060	RNA-Seq of Carya illinoinensis: drought treated for 6 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415584	ILLUMINA	6182345400 bp
SRR15027061	RNA-Seq of Carya illinoinensis: drought treated for 6 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415585	ILLUMINA	6529685700 bp
SRR15027062	RNA-Seq of Carya illinoinensis: drought treated for 6 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415586	ILLUMINA	7274681700 bp
SRR15027063	RNA-Seq of Carya illinoinensis: drought treated for 9 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415587	ILLUMINA	6157313100 bp
SRR15027064	RNA-Seq of Carya illinoinensis: drought treated for 9 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415588	ILLUMINA	6409283700 bp
SRR15027065	RNA-Seq of Carya illinoinensis: drought treated for 9 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415589	ILLUMINA	6431114100 bp
SRR15027066	RNA-Seq of Carya illinoinensis: drought treated for 12 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415590	ILLUMINA	7078774500 bp
SRR15027067	RNA-Seq of Carya illinoinensis: drought treated for 12 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415591	ILLUMINA	7698392400 bp
SRR15027068	RNA-Seq of Carya illinoinensis: drought treated for 12 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415592	ILLUMINA	7681919100 bp
SRR15027069	RNA-Seq of Carya illinoinensis: drought treated for 15 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415593	ILLUMINA	7148075700 bp
SRR15027070	RNA-Seq of Carya illinoinensis: drought treated for 15 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415594	ILLUMINA	7694343300 bp
SRR15027071	RNA-Seq of Carya illinoinensis: drought treated for 15 days seedings leaf from Nanjing Forestry university experimental station China: Jurong, GSM5415595	ILLUMINA	6796776300 bp

PRJNA767196

The RNA-seq datasets of monocot and eudicot plants under cold stress (4 degrees centigrade) at 0, 2, 24, and 168 hours (h).

Guo et al., 2022

Library	Title	Platform	Total Base
SRR16109721	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 168h seedling with leaf from China: Hangzhou, Ci-L168h_rep1	ILLUMINA	9179227722 bp
SRR16109722	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 168h seedling with leaf from China: Hangzhou, Ci-L168h_rep1	ILLUMINA	9349010527 bp
SRR16109723	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 168h seedling with leaf from China: Hangzhou, Ci-L168h_rep1	ILLUMINA	8713305704 bp
SRR16109724	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 24h seedling with leaf from China: Hangzhou, Ci-L24h_rep1	ILLUMINA	8528174923 bp
SRR16109726	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 24h seedling with leaf from China: Hangzhou, Ci-L24h_rep1	ILLUMINA	8574927137 bp
SRR16109727	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 24h seedling with leaf from China: Hangzhou, Ci-L24h_rep1	ILLUMINA	9272558158 bp
SRR16109728	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 2h seedling with leaf from China: Hangzhou, Ci-L2h_rep1	ILLUMINA	9066099518 bp
SRR16109729	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 2h seedling with leaf from China: Hangzhou, Ci-L2h_rep1	ILLUMINA	8751263854 bp
SRR16109730	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 2h seedling with leaf from China: Hangzhou, Ci-L2h_rep1	ILLUMINA	9450482453 bp
SRR16109731	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 0h seedling with leaf from China: Hangzhou, Ci-L0h_rep1	ILLUMINA	9166586814 bp
SRR16109732	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 0h seedling with leaf from China: Hangzhou, Ci-L0h_rep1	ILLUMINA	9068874955 bp
SRR16109733	RNA-Seq of Carya illinoinensis: 3 weeks cold stress 0h seedling with leaf from China: Hangzhou, Ci-L0h_rep1	ILLUMINA	8795843133 bp

PRJNA768261

Carya illinoinensis Raw sequence reads.

Library	Title	Platform	Total Base
SRR16709478	RNA-Seq of Carya illinoinensis: mature plant with catkin from USA: Texas, VC1-68, 31-IKDY_RNAseq_CSP-1-15.Catkin_CGCTCATT-GGCTCTGA_PecanVC1-68_I751_L7_R2.fastq	ILLUMINA	10520788224 bp
SRR16709479	RNA-Seq of Carya illinoinensis: mature plant with dormant bud from USA: Texas, VC1-68, 39-IKEC_RNAseq_CSP-1-15.Dormantbud_GAGATTCC-GGCTCTGA_PecanVC1-68_I751_L7_R2.fastq	ILLUMINA	10166576240 bp
SRR16709480	RNA-Seq of Carya illinoinensis: mature plant with expanding leaf from USA: Texas, VC1-68, 47-IKEG_RNAseq_CSP-1-15.Expandingleaf_ATTCAGAA-GGCTCTGA_PecanVC1-68_I751_L7_R2.fastq	ILLUMINA	9574296384 bp
SRR16709481	RNA-Seq of Carya illinoinensis: mature plant with swelling bud from USA: Texas, VC1-68, 55-IKEK_RNAseq_CSP-1-15.Swellingbud_GAATTCGT-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	8203025952 bp
SRR16709482	RNA-Seq of Carya illinoinensis: mature plant with catkin from USA: TEXAS, VC1-68, 63-IKEP_RNAseq_CSV-16-16.Catkin_CTGAAGCT-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	8078228784 bp
SRR16709483	RNA-Seq of Carya illinoinensis: mature plant with expanding leaf from USA: TEXAS, VC1-68, 71-IKET_RNAseq_CSV-16-16.Expandingleaf_TAATGCGC-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	7512601520 bp
SRR16709484	RNA-Seq of Carya illinoinensis: mature plant with swelling bud from USA: TEXAS, VC1-68, 79-IKEY_RNAseq_CSV-16-16.Swellingbud_CGGCTATG-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	8819887856 bp
SRR16709485	RNA-Seq of Carya illinoinensis: mature plant with catkin from USA: TEXAS, VC1-68, 87-IKFC_RNAseq_CSV-3-4.Catkin_TCCGCGAA-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	7805796144 bp
SRR16709486	RNA-Seq of Carya illinoinensis: mature plant with Pistillate flower from USA: Texas, VC1-68, IKDN_RNAseq_CSV-3-4.Pistillateflower_ATTACTCG-AGGCGAAG_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	6838964576 bp
SRR16709487	RNA-Seq of Carya illinoinensis: mature plant with swelling bud from USA: Texas, VC1-68, 23-IKDT_RNAseq_CSV-3-4.Swellingbud_TCCGGAGA-AGGCGAAG_PecanVC1-68_I751_L7_R2.fastq	ILLUMINA	11035766960 bp
SRR16709488	RNA-Seq of Carya illinoinensis: mature plant with dormant bud from USA: TEXAS, VC1-68, 95-IKFG_RNAseq_CSV-3-4.Dormantbud_TCTCGCGC-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	7832275152 bp
SRR16709489	RNA-Seq of Carya illinoinensis: mature plant with expanding leaf from USA: TEXAS, VC1-68, 103-IKFK_RNAseq_CSV-3-4.Expandingleaf_AGCGATAG-GGCTCTGA_PecanVC1-68_I751_L8_R2.fastq	ILLUMINA	8411147088 bp

PRJNA784729

Comparative Analysis of the Transcriptomes of Persisting and Abscised Fruitlet.

Zhang et al., 2022

Library	Title	Platform	Total Base
SRR17070913	RNA-Seq of Carya illinoinensis: 35 DAA plant with during the early stage of persisting fruitlet from China: Nanjing, Pawnee, P1-3	ILLUMINA	7169064000 bp
SRR17070914	RNA-Seq of Carya illinoinensis: 35 DAA plant with during the early stage of persisting fruitlet from China: Nanjing, Pawnee, P1-2	ILLUMINA	6972313800 bp
SRR17070915	RNA-Seq of Carya illinoinensis: 35 DAA plant with during the early stage of persisting fruitlet from China: Nanjing, Pawnee, P1-1	ILLUMINA	7000818000 bp
SRR17070916	RNA-Seq of Carya illinoinensis: 35 DAA plant with during the early stage of abscised fruitlet from China: Nanjing, Pawnee, A1-3	ILLUMINA	5890097400 bp
SRR17070917	RNA-Seq of Carya illinoinensis: 35 DAA plant with during the early stage of abscised fruitlet from China: Nanjing, Pawnee, A1-2	ILLUMINA	5766999900 bp
SRR17070918	RNA-Seq of Carya illinoinensis: 35 DAA plant with during the early stage of abscised fruitlet from China: Nanjing, Pawnee, A1-1	ILLUMINA	5770040700 bp

PRJNA792564

Transcriptomes of pecan kernels on five developmental stages from two cultivars..

Zhang et al., 2022

Library	Title	Platform	Total Base
SRR17334995	RNA-Seq of Carya illinoinensis: 11 years plant with 135 days after full bloom kernel from China: Zhejiang, YLC28, H135_1	ILLUMINA	8146341300 bp
SRR17334996	RNA-Seq of Carya illinoinensis: 11 years plant with 121 days after full bloom kernel from China: Zhejiang, YLC28, H121_3	ILLUMINA	9051854100 bp
SRR17334997	RNA-Seq of Carya illinoinensis: 11 years plant with 121 days after full bloom kernel from China: Zhejiang, YLC28, H121_2	ILLUMINA	8067040800 bp
SRR17334998	RNA-Seq of Carya illinoinensis: 11 years plant with 121 days after full bloom kernel from China: Zhejiang, YLC28, H121_1	ILLUMINA	7523642400 bp
SRR17334999	RNA-Seq of Carya illinoinensis: 11 years plant with 114 days after full bloom kernel from China: Zhejiang, YLC28, H114_3	ILLUMINA	6439893600 bp
SRR17335000	RNA-Seq of Carya illinoinensis: 11 years plant with 114 days after full bloom kernel from China: Zhejiang, YLC28, H114_2	ILLUMINA	8520424200 bp
SRR17335001	RNA-Seq of Carya illinoinensis: 11 years plant with 114 days after full bloom kernel from China: Zhejiang, YLC28, H114_1	ILLUMINA	9808818600 bp
SRR17335002	RNA-Seq of Carya illinoinensis: 11 years plant with 150 days after full bloom kernel from China: Zhejiang, Oconee, L150_3	ILLUMINA	6636676200 bp
SRR17335003	RNA-Seq of Carya illinoinensis: 11 years plant with 150 days after full bloom kernel from China: Zhejiang, Oconee, L150_2	ILLUMINA	6329380200 bp
SRR17335004	RNA-Seq of Carya illinoinensis: 11 years plant with 150 days after full bloom kernel from China: Zhejiang, Oconee, L150_1	ILLUMINA	8119309500 bp
SRR17335005	RNA-Seq of Carya illinoinensis: 11 years plant with 135 days after full bloom kernel from China: Zhejiang, Oconee, L135_3	ILLUMINA	7545093900 bp
SRR17335006	RNA-Seq of Carya illinoinensis: 11 years plant with 135 days after full bloom kernel from China: Zhejiang, Oconee, L135_2	ILLUMINA	8870504100 bp
SRR17335007	RNA-Seq of Carya illinoinensis: 11 years plant with 135 days after full bloom kernel from China: Zhejiang, Oconee, L135_1	ILLUMINA	7412808900 bp
SRR17335008	RNA-Seq of Carya illinoinensis: 11 years plant with 121 days after full bloom kernel from China: Zhejiang, Oconee, L121_3	ILLUMINA	8022668700 bp
SRR17335009	RNA-Seq of Carya illinoinensis: 11 years plant with 121 days after full bloom kernel from China: Zhejiang, Oconee, L121_2	ILLUMINA	6928143300 bp
SRR17335010	RNA-Seq of Carya illinoinensis: 11 years plant with 121 days after full bloom kernel from China: Zhejiang, Oconee, L121_1	ILLUMINA	7824126600 bp
SRR17335011	RNA-Seq of Carya illinoinensis: 11 years plant with 114 days after full bloom kernel from China: Zhejiang, Oconee, L114_3	ILLUMINA	10343578200 bp
SRR17335012	RNA-Seq of Carya illinoinensis: 11 years plant with 100 days after full bloom kernel from China: Zhejiang, YLC28, H100_3	ILLUMINA	5534390400 bp
SRR17335013	RNA-Seq of Carya illinoinensis: 11 years plant with 114 days after full bloom kernel from China: Zhejiang, Oconee, L114_2	ILLUMINA	7478387400 bp
SRR17335014	RNA-Seq of Carya illinoinensis: 11 years plant with 114 days after full bloom kernel from China: Zhejiang, Oconee, L114_1	ILLUMINA	8792764800 bp
SRR17335015	RNA-Seq of Carya illinoinensis: 11 years plant with 100 days after full bloom kernel from China: Zhejiang, Oconee, L100_3	ILLUMINA	7900166400 bp
SRR17335016	RNA-Seq of Carya illinoinensis: 11 years plant with 100 days after full bloom kernel from China: Zhejiang, Oconee, L100_2	ILLUMINA	6431975100 bp
SRR17335017	RNA-Seq of Carya illinoinensis: 11 years plant with 100 days after full bloom kernel from China: Zhejiang, Oconee, L100_1	ILLUMINA	6835452300 bp
SRR17335018	RNA-Seq of Carya illinoinensis: 11 years plant with 150 days after full bloom kernel from China: Zhejiang, YLC28, H150_3	ILLUMINA	6751371300 bp
SRR17335019	RNA-Seq of Carya illinoinensis: 11 years plant with 150 days after full bloom kernel from China: Zhejiang, YLC28, H150_2	ILLUMINA	7076389800 bp
SRR17335020	RNA-Seq of Carya illinoinensis: 11 years plant with 150 days after full bloom kernel from China: Zhejiang, YLC28, H150_1	ILLUMINA	8589164700 bp
SRR17335021	RNA-Seq of Carya illinoinensis: 11 years plant with 135 days after full bloom kernel from China: Zhejiang, YLC28, H135_3	ILLUMINA	7948227600 bp
SRR17335022	RNA-Seq of Carya illinoinensis: 11 years plant with 135 days after full bloom kernel from China: Zhejiang, YLC28, H135_2	ILLUMINA	5428154100 bp
SRR17335023	RNA-Seq of Carya illinoinensis: 11 years plant with 100 days after full bloom kernel from China: Zhejiang, YLC28, H100_2	ILLUMINA	4857769200 bp
SRR17335024	RNA-Seq of Carya illinoinensis: 11 years plant with 100 days after full bloom kernel from China: Zhejiang, YLC28, H100_1	ILLUMINA	5647860600 bp

PRJNA797196

Transcriptome sequencing of two different cultivars 'Pawnee' and 'Jinhua' scions following grafting.

Library	Title	Platform	Total Base
SRR17616303	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 1 with scions collected at 12 days after budding from China: Nanjing, Pawnee, Pawnee-12d-1	ILLUMINA	6217293600 bp
SRR17616304	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 3 with scions collected at 7 days after budding from China: Nanjing, Pawnee, Pawnee-7d-3	ILLUMINA	6146927100 bp
SRR17616305	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 2 with scions collected at 7 days after budding from China: Nanjing, Pawnee, Pawnee-7d-2	ILLUMINA	6476281800 bp
SRR17616306	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 1 with scions collected at 7 days after budding from China: Nanjing, Pawnee, Pawnee-7d-1	ILLUMINA	7728456900 bp
SRR17616307	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 3 with scions collected at 3 days after budding from China: Nanjing, Pawnee, Pawnee-3d-3	ILLUMINA	6526883100 bp
SRR17616308	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 2 with scions collected at 3 days after budding from China: Nanjing, Pawnee, Pawnee-3d-2	ILLUMINA	5887507500 bp
SRR17616309	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 1 with scions collected at 3 days after budding from China: Nanjing, Pawnee, Pawnee-3d-1	ILLUMINA	6303637800 bp
SRR17616310	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 3 with scions collected at 12 days after budding from China: Nanjing, jinhua, Jinhua-12d-3	ILLUMINA	6357742800 bp
SRR17616311	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 2 with scions collected at 12 days after budding from China: Nanjing, jinhua, Jinhua-12d-2	ILLUMINA	6171198300 bp
SRR17616312	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 1 with scions collected at 12 days after budding from China: Nanjing, jinhua, Jinhua-12d-1	ILLUMINA	6426169800 bp
SRR17616313	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 3 with scions collected at 7 days after budding from China: Nanjing, jinhua, Jinhua-7d-3	ILLUMINA	6265599300 bp
SRR17616314	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 3 with scions collected at 0 days after budding from China: Nanjing, Pawnee, Pawnee-0d-3	ILLUMINA	6989013900 bp
SRR17616315	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 2 with scions collected at 7 days after budding from China: Nanjing, jinhua, Jinhua-7d-2	ILLUMINA	6328721700 bp
SRR17616316	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 1 with scions collected at 7 days after budding from China: Nanjing, jinhua, Jinhua-7d-1	ILLUMINA	6525871500 bp
SRR17616317	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 3 with scions collected at 3 days after budding from China: Nanjing, jinhua, Jinhua-3d-3	ILLUMINA	6222523500 bp
SRR17616318	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 2 with scions collected at 3 days after budding from China: Nanjing, jinhua, Jinhua-3d-2	ILLUMINA	6532398600 bp
SRR17616319	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 1 with scions collected at 3 days after budding from China: Nanjing, jinhua, Jinhua-3d-1	ILLUMINA	6575355600 bp
SRR17616320	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 3 with scions collected at 0 days after budding from China: Nanjing, jinhua, Jinhua-0d-3	ILLUMINA	6571831200 bp
SRR17616321	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 2 with scions collected at 0 days after budding from China: Nanjing, jinhua, Jinhua-0d-2	ILLUMINA	6942781200 bp
SRR17616322	RNA-Seq of Carya illinoinensis: new branch growth to August Jinhua replication 1 with scions collected at 0 days after budding from China: Nanjing, jinhua, Jinhua-0d-1	ILLUMINA	7811388600 bp
SRR17616323	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 3 with scions collected at 12 days after budding from China: Nanjing, Pawnee, Pawnee-12d-3	ILLUMINA	6269164200 bp
SRR17616324	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 2 with scions collected at 12 days after budding from China: Nanjing, Pawnee, Pawnee-12d-2	ILLUMINA	6116724000 bp
SRR17616325	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 2 with scions collected at 0 days after budding from China: Nanjing, Pawnee, Pawnee-0d-2	ILLUMINA	7104607800 bp
SRR17616326	RNA-Seq of Carya illinoinensis: new branch growth to August Pawnee replication 1 with scions collected at 0 days after budding from China: Nanjing, Pawnee, Pawnee-0d-1	ILLUMINA	6540018900 bp

PRJNA799663

Insight into the CBL and CIPK Gene Families in Pecan (Carya illinoinensis): Identification, Evolution and Expression Patterns in Drought Response.

Zhu et al., 2022

Library	Title	Platform	Total Base
SRR17756844	RNA-Seq of Carya illinoinensis: 3 months plant with root from Nanjing Forestry university experimental station China: Jurong, Pawnee, Root1, sample4	ILLUMINA	5693600700 bp
SRR17756845	RNA-Seq of Carya illinoinensis: 9 years plant with fruit from Nanjing Forestry university experimental station China: Jurong, Pawnee, fruit3, sample3	ILLUMINA	6555166800 bp
SRR17756846	RNA-Seq of Carya illinoinensis: 9 years plant with fruit from Nanjing Forestry university experimental station China: Jurong, Pawnee, fruit2, sample3	ILLUMINA	7627049100 bp
SRR17756847	RNA-Seq of Carya illinoinensis: 9 years plant with fruit from Nanjing Forestry university experimental station China: Jurong, Pawnee, fruit1, sample3	ILLUMINA	6829500600 bp
SRR17756848	RNA-Seq of Carya illinoinensis: 9 years plant with male flower from Nanjing Forestry university experimental station China: Jurong, Pawnee, Male3, sample2	ILLUMINA	7466862900 bp
SRR17756849	RNA-Seq of Carya illinoinensis: 9 years plant with male flower from Nanjing Forestry university experimental station China: Jurong, Pawnee, Male2, sample2	ILLUMINA	6005453700 bp
SRR17756850	RNA-Seq of Carya illinoinensis: 9 years plant with male flower from Nanjing Forestry university experimental station China: Jurong, Pawnee, Male1, sample2	ILLUMINA	6528708000 bp
SRR17756851	RNA-Seq of Carya illinoinensis: 9 years plant with female flower from Nanjing Forestry university experimental station China: Jurong, Pawnee, female3, sample1	ILLUMINA	7054233000 bp
SRR17756852	RNA-Seq of Carya illinoinensis: 9 years plant with stem from Nanjing Forestry university experimental station China: Jurong, Pawnee, Stem3, sample6	ILLUMINA	6404391900 bp
SRR17756853	RNA-Seq of Carya illinoinensis: 9 years plant with stem from Nanjing Forestry university experimental station China: Jurong, Pawnee, Stem2, sample6	ILLUMINA	5872858200 bp
SRR17756854	RNA-Seq of Carya illinoinensis: 9 years plant with stem from Nanjing Forestry university experimental station China: Jurong, Pawnee, Stem1, sample6	ILLUMINA	6230287500 bp
SRR17756855	RNA-Seq of Carya illinoinensis: 9 years plant with seed from Nanjing Forestry university experimental station China: Jurong, Pawnee, Seed3, sample5	ILLUMINA	6095458200 bp
SRR17756856	RNA-Seq of Carya illinoinensis: 9 years plant with seed from Nanjing Forestry university experimental station China: Jurong, Pawnee, Seed2, sample5	ILLUMINA	6575464500 bp
SRR17756857	RNA-Seq of Carya illinoinensis: 9 years plant with seed from Nanjing Forestry university experimental station China: Jurong, Pawnee, Seed1, sample5	ILLUMINA	6153060000 bp
SRR17756858	RNA-Seq of Carya illinoinensis: 3 months plant with root from Nanjing Forestry university experimental station China: Jurong, Pawnee, Root3, sample4	ILLUMINA	6363786300 bp
SRR17756859	RNA-Seq of Carya illinoinensis: 3 months plant with root from Nanjing Forestry university experimental station China: Jurong, Pawnee, Root2, sample4	ILLUMINA	6173369100 bp
SRR17756860	RNA-Seq of Carya illinoinensis: 9 years plant with female flower from Nanjing Forestry university experimental station China: Jurong, Pawnee, female2, sample1	ILLUMINA	6489792900 bp
SRR17756861	RNA-Seq of Carya illinoinensis: 9 years plant with female flower from Nanjing Forestry university experimental station China: Jurong, Pawnee, female1, sample1	ILLUMINA	6581519100 bp

PRJNA870326

Transcriptome study of pecan response to drought during drought stress and after rehydration.

Library	Title	Platform	Total Base
SRR21101763	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D10	ILLUMINA	7195841700 bp
SRR21101764	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D9	ILLUMINA	7079069700 bp
SRR21101765	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D8	ILLUMINA	7216107600 bp
SRR21101766	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D7	ILLUMINA	7356006300 bp
SRR21101767	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D6	ILLUMINA	6948269100 bp
SRR21101768	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D5	ILLUMINA	7650753300 bp
SRR21101769	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D4	ILLUMINA	7207670100 bp
SRR21101770	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D3	ILLUMINA	7139340000 bp
SRR21101771	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D15	ILLUMINA	7087518900 bp
SRR21101772	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D14	ILLUMINA	7196420100 bp
SRR21101773	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D13	ILLUMINA	6939436200 bp
SRR21101774	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D12	ILLUMINA	7075920900 bp
SRR21101775	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D11	ILLUMINA	6828135900 bp
SRR21101776	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D2	ILLUMINA	7101638100 bp
SRR21101777	RNA-Seq of Carya illinoinensis: 6 months plant with leaf from China: hangzhou, Mahan, D1	ILLUMINA	7386630000 bp

PRJNA895395

Transcriptome ananlyses reveals the fruit development characteristics of different carya cathayensis cultivars.

Library	Title	Platform	Total Base
SRR22101330	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo1-1	BGISEQ	6490706700 bp
SRR22101331	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan3-3	BGISEQ	6442803000 bp
SRR22101332	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan3-2	BGISEQ	6458766000 bp
SRR22101333	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan3-1	BGISEQ	6478536000 bp
SRR22101334	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan2-3	BGISEQ	6407127000 bp
SRR22101335	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan2-2	BGISEQ	6532538100 bp
SRR22101336	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan2-1	BGISEQ	6316125600 bp
SRR22101338	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-3-3	BGISEQ	6448219800 bp
SRR22101339	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-3-2	BGISEQ	6334875000 bp
SRR22101340	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-3-1	BGISEQ	6425452800 bp
SRR22101341	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-2-3	BGISEQ	6350472000 bp
SRR22101342	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-2-2	BGISEQ	6439098300 bp
SRR22101343	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-2-1	BGISEQ	6452055900 bp
SRR22101344	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-1-3	BGISEQ	6487752600 bp
SRR22101345	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan1-3	BGISEQ	6347686200 bp
SRR22101346	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-1-2	BGISEQ	5797392900 bp
SRR22101347	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis clone Y01, Y01-1-1	BGISEQ	6196322100 bp
SRR22101348	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo3-3	BGISEQ	6474048000 bp
SRR22101349	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo3-2	BGISEQ	6443086800 bp
SRR22101350	RNA-Seq of Carya illinoinensis: maturity stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo3-1	BGISEQ	6444853200 bp
SRR22101351	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo2-3	BGISEQ	6473329200 bp
SRR22101352	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo2-2	BGISEQ	6507873900 bp
SRR22101353	RNA-Seq of Carya illinoinensis: enlargement stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo2-1	BGISEQ	6359740200 bp
SRR22101354	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo1-3	BGISEQ	6464336100 bp
SRR22101355	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis Caddo, Caddo1-2	BGISEQ	6456497400 bp
SRR22101356	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan1-2	BGISEQ	6511540200 bp
SRR22101357	RNA-Seq of Carya illinoinensis: fruit set stage plant with fruits from China: Nanjing, Carya illinoensis Mahan, Mahan1-1	BGISEQ	6415135200 bp
SRR22101337	RNA-Seq of Carya illinoinensis: 12 years plant with fruits\\leaves\\stem from China: Nanjing, Carya illinoensis Mahan, r54269_20191117_081025-1_A01, Carya_illinoensis	PACBIO_SMRT	2026363655 bp

PRJNA940909

Transcriptome pecan seeds.

Library	Title	Platform	Total Base
SRR23699306	RNA-Seq of Carya illinoinensis: 16 years plant with seed from China: Anhui Province, Pawnee, A4_1	ILLUMINA	4555975473 bp
SRR23699307	RNA-Seq of Carya illinoinensis: 15 years plant with seed from China: Anhui Province, Pawnee, A3_3	ILLUMINA	3378826283 bp
SRR23699308	RNA-Seq of Carya illinoinensis: 14 years plant with seed from China: Anhui Province, Pawnee, A3_2	ILLUMINA	3792578967 bp
SRR23699309	RNA-Seq of Carya illinoinensis: 13 years plant with seed from China: Anhui Province, Pawnee, A3_1	ILLUMINA	3505370021 bp
SRR23699310	RNA-Seq of Carya illinoinensis: 12 years plant with seed from China: Anhui Province, Pawnee, A2_3	ILLUMINA	3560446214 bp
SRR23699311	RNA-Seq of Carya illinoinensis: 11 years plant with seed from China: Anhui Province, Pawnee, A2_2	ILLUMINA	3364263239 bp
SRR23699312	RNA-Seq of Carya illinoinensis: 10 years plant with seed from China: Anhui Province, Pawnee, A2_1	ILLUMINA	3544443234 bp
SRR23699313	RNA-Seq of Carya illinoinensis: 9 years plant with seed from China: Anhui Province, Pawnee, A1_3	ILLUMINA	3832494307 bp
SRR23699314	RNA-Seq of Carya illinoinensis: 18 years plant with seed from China: Anhui Province, Pawnee, A4_3	ILLUMINA	3951987100 bp
SRR23699315	RNA-Seq of Carya illinoinensis: 17 years plant with seed from China: Anhui Province, Pawnee, A4_2	ILLUMINA	4104199026 bp
SRR23699316	RNA-Seq of Carya illinoinensis: 8 years plant with seed from China: Anhui Province, Pawnee, A1_2	ILLUMINA	3931200591 bp
SRR23699317	RNA-Seq of Carya illinoinensis: 7 years plant with seed from China: Anhui Province, Pawnee, A1_1	ILLUMINA	3674079905 bp

Species Info.

Omics Data

Omics Analysis

Seq. Analysis

Omics Analysis

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Project