Species Info.

Omics Data

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Seq. Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA1000241 Presented a high-quality reference genome of C. camphora and conduct comparative genomics between C. camphora and C. kanehirae. Li et al., 2023
12
Library Title Platform Total Base VCF File
SRR25500208 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_2h1 ILLUMINA 9473032200 bp
SRR25500218 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_0h3 ILLUMINA 13887424200 bp
SRR25500229 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_0h2 ILLUMINA 7213482000 bp
SRR25500240 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_0h1 ILLUMINA 9112437600 bp
SRR25500251 RNA-Seq of Cinnamomum camphora：30 years plant with full blooming flower from China：Hangzhou，Transcriptome_flower ILLUMINA 14915886600 bp
SRR25500262 RNA-Seq of Cinnamomum camphora：500 years plant with yound stem stem from China：Wuxue，Transcriptome_stem ILLUMINA 6569714038 bp
SRR25500273 RNA-Seq of Cinnamomum camphora：500 years plant with mature leaf from China：Wuxue，Transcriptome_leaf ILLUMINA 6949733920 bp
SRR25500290 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_12h3 ILLUMINA 10544657100 bp
SRR25500291 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_12h2 ILLUMINA 7439166900 bp
SRR25500292 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_12h1 ILLUMINA 12103299600 bp
SRR25500293 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_2h3 ILLUMINA 5979687300 bp
SRR25500294 RNA-Seq of Cinnamomum camphora：30 years plant with mature leaf from China：Hangzhou，Transcriptome_CA_2h2 ILLUMINA 7440766200 bp
PRJNA288748 High quality clean reads were obtained from cDNA libraries of the three samples. genes previously annotated to be potentially involved in somatic embryogenesis were identified. Shi et al., 2016
3
Library Title Platform Total Base VCF File
SRR2095975 RNA-Seq of Cinnamomum camphora：plant with adult embryo from China:Wuhan，IZE ILLUMINA 10839771600 bp
SRR2095976 RNA-Seq of Cinnamomum camphora：plant with adult embryo from China:Wuhan，IZE_Suc ILLUMINA 8996019800 bp
SRR2095977 RNA-Seq of Cinnamomum camphora：plant with adult somatic embryo from China:Wuhan，SE_5w ILLUMINA 12131050600 bp
PRJNA421868 Performed comparative genomic and phylogenetic analyses of the transcriptome, and the WGDs detected supported a model of exponential gene loss during evolution Ren et al., 2018
1
Library Title Platform Total Base VCF File
SRR6374671 RNA-Seq of Cinnamomum camphora：plant with young stage young leaf from China：Shanghai，Cinnamomum_camphora ILLUMINA 3841734576 bp
PRJNA428279 The differential expression of genes between borneol-type and linalool-type of the Cinnamomum camphora. -
4
Library Title Platform Total Base VCF File
SRR6436154 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaf from China：Nanchang，Borneol-type，L-L2 ILLUMINA 8927554800 bp
SRR6436155 RNA-Seq of Cinnamomum camphora: 8 years plant with mature leaf from China: Nanchang，Linalool-type，F-L2 ILLUMINA 9212300400 bp
SRR6436156 RNA-Seq of Cinnamomum camphora：7 years plant with mature leaf from China：Nanchang，Linalool-type，F-L1 ILLUMINA 10011854400 bp
SRR6436157 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaf from China：Nanchang，Borneol-type，L-L1 ILLUMINA 9293196000 bp
PRJNA613766 RNA-seq analysis of fresh leaves from the three-years-old clones plant -
6
Library Title Platform Total Base VCF File
SRR11362613 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaves from China，LI-2 ILLUMINA 7251922500 bp
SRR11362614 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaves from China，LI-1 ILLUMINA 7865153700 bp
SRR11362615 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaves from China，CI-2 ILLUMINA 7194215700 bp
SRR11362616 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaves from China，CI-1 ILLUMINA 8827617000 bp
SRR11362617 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaves from China，N-2 ILLUMINA 7379869200 bp
SRR11362618 RNA-Seq of Cinnamomum camphora：3 years plant with mature leaves from China，N-1 ILLUMINA 5865356400 bp
PRJNA679978 Transcritomic analysis of Cinnamomum camphora in response to mechanical damage, aim toexplore the interaction between TFs and terpene synthase (TPS) unigenes that might participate in monoterpene biosynthesis in BCC. Yang et al., 2021
9
Library Title Platform Total Base VCF File
SRR13206127 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，MD_6h_3 ILLUMINA 7106642256 bp
SRR13206130 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，MD_2h_3 ILLUMINA 9247443548 bp
SRR13206131 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，MD_2h_2 ILLUMINA 7906864340 bp
SRR13206132 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，MD_2h_1 ILLUMINA 7558685520 bp
SRR13206133 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，Ck_3 ILLUMINA 7003581736 bp
SRR13206134 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，Ck_2 ILLUMINA 7603220856 bp
SRR13206135 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，Ck_1 ILLUMINA 7404172354 bp
SRR13206128 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，MD_6h_2 ILLUMINA 7294249488 bp
SRR13206129 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，MD_6h_1 ILLUMINA 7968837458 bp
PRJNA741581 Cinnamomum camphora transcriptome raw sequence reads -
6
Library Title Platform Total Base VCF File
SRR14962704 RNA-Seq of Cinnamomum camphora：plant with newly sprouting branches bark from China：Jiangxi,Nanchuang，Wild type，GB3 ILLUMINA 9075877200 bp
SRR14962705 RNA-Seq of Cinnamomum camphora：plant with newly sprouting branches bark from China：Jiangxi,Nanchuang，Wild type，GB2 ILLUMINA 7526361000 bp
SRR14962706 RNA-Seq of Cinnamomum camphora：plant with newly sprouting branches bark from China：Jiangxi,Nanchuang，Wild type，GB1 ILLUMINA 6568864800 bp
SRR14962707 RNA-Seq of Cinnamomum camphora：plant with newly sprouting branches bark from China：Jiangxi,Nanchuang，Gantong 1，RB3 ILLUMINA 7249902000 bp
SRR14962708 RNA-Seq of Cinnamomum camphora：plant with newly sprouting branches bark from China：Jiangxi,Nanchuang，Gantong 1，RB2 ILLUMINA 5823589200 bp
SRR14962709 RNA-Seq of Cinnamomum camphora：plant with newly sprouting branches bark from China：Jiangxi,Nanchuang，Gantong 1，RB1 ILLUMINA 6363532500 bp
PRJNA746245 Integrating GC-MS and ssRNA-Seq analysis to identify long non-coding RNAs related to terpenoid biosynthesis in Cinnamomum camphora Ni et al., 2021
9
Library Title Platform Total Base VCF File
SRR15145706 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，linalool-type，LT ILLUMINA 21882847500 bp
SRR15145707 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，cineole-type，CT ILLUMINA 22630096800 bp
SRR15145708 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，cineole-type，CT ILLUMINA 21077954100 bp
SRR15145709 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，cineole-type，CT ILLUMINA 18958928700 bp
SRR15145710 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，nerolidol-type，NT ILLUMINA 21129902100 bp
SRR15145711 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，nerolidol-type，NT ILLUMINA 15541575300 bp
SRR15145712 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，nerolidol-type，NT ILLUMINA 18517988700 bp
SRR15145713 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，linalool-type，LT ILLUMINA 19706022900 bp
SRR15145714 RNA-Seq of Cinnamomum camphora：plant with maturation period leaf from China，linalool-type，LT ILLUMINA 17779292100 bp
PRJNA747104 RNA-seq analysis of 10 TIDS genes in the genome of the C. camphora borneol chemotype that were unevenly distributed on chromosomes Yang et al., 2021
9
Library Title Platform Total Base VCF File
SRR15170716 RNA-Seq of Cinnamomum camphora：1 year plant with stems from China:Guangdong,Guangzhou，Stem_3 ILLUMINA 6469821500 bp
SRR15170717 RNA-Seq of Cinnamomum camphora：1 year plant with stems from China:Guangdong,Guangzhou，Stem_2 ILLUMINA 7035001816 bp
SRR15170718 RNA-Seq of Cinnamomum camphora：1 year plant with stems from China:Guangdong,Guangzhou，Stem_1 ILLUMINA 7162916936 bp
SRR15170719 RNA-Seq of Cinnamomum camphora：1 year plant with roots from China:Guangdong,Guangzhou，Root_3 ILLUMINA 6759755694 bp
SRR15170720 RNA-Seq of Cinnamomum camphora：1 year plant with roots from China:Guangdong,Guangzhou，Root_2 ILLUMINA 8072756866 bp
SRR15170721 RNA-Seq of Cinnamomum camphora：1 year plant with roots from China:Guangdong,Guangzhou，Root_1 ILLUMINA 7533167124 bp
SRR15170722 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，leaf_3 ILLUMINA 6684079326 bp
SRR15170723 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，leaf_2 ILLUMINA 6365517344 bp
SRR15170724 RNA-Seq of Cinnamomum camphora：1 year plant with leaves from China:Guangdong,Guangzhou，leaf_1 ILLUMINA 8094670288 bp
PRJNA753557 Subcellular localization analyses to identify two key terpene synthase genes , the products of which were characterized to catalyze the biosynthesis of two uppermost volatiles, respectively, and meditate the generation of two chemotypes by transcriptional regulation and compartmentalization. Wang et al., 2022
18
Library Title Platform Total Base VCF File
SRR15411555 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Cam2 ILLUMINA 7368512392 bp
SRR15411556 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Cam1 ILLUMINA 7510709792 bp
SRR15411557 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Lin1 ILLUMINA 8980023562 bp
SRR15411559 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Bor3 ILLUMINA 7657462202 bp
SRR15411560 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Bor2 ILLUMINA 6629712860 bp
SRR15411561 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Bor1 ILLUMINA 8219099110 bp
SRR15411562 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Cit3 ILLUMINA 10809730422 bp
SRR15411563 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Cit2 ILLUMINA 7425967510 bp
SRR15411564 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Cit1 ILLUMINA 7691514328 bp
SRR15411565 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Lin3 ILLUMINA 9070113642 bp
SRR15411566 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Lin2 ILLUMINA 10168427310 bp
SRR15411567 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Euc3 ILLUMINA 8328765406 bp
SRR15411568 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Euc2 ILLUMINA 6662892272 bp
SRR15411569 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Euc1 ILLUMINA 8609382434 bp
SRR15411570 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Ner3 ILLUMINA 8007750050 bp
SRR15411571 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Ner2 ILLUMINA 7888931086 bp
SRR15411572 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Ner1 ILLUMINA 8250528434 bp
SRR15411573 RNA-Seq of Cinnamomum camphora：3 years plant with leaves from China:Jiangxi,Nanchang，Cam3 ILLUMINA 7433349226 bp
PRJNA761572 Cinnamomum camphora Genome sequencing and assembly -
12
Library Title Platform Total Base VCF File
SRR15881622 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7725254100 bp
SRR15881623 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 6693130500 bp
SRR15881624 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7794321000 bp
SRR15881626 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 6682873500 bp
SRR15881627 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7529613600 bp
SRR15881628 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7220343000 bp
SRR15881629 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7485416100 bp
SRR15881630 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7883270700 bp
SRR15881631 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7584492000 bp
SRR15881632 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 6784800000 bp
SRR15881633 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 6827670600 bp
SRR15881634 RNA-Seq of Cinnamomum camphora：1.5 years plant with leaf from China：Guangxi，Cinnamomum camphora ILLUMINA 7157984100 bp
PRJNA857520 RNA-Seq analysis to identify genes related to camphor iron uptake in Cinnamomum camphora Kong et al., 2022
6
Library Title Platform Total Base VCF File
SRR20738290 RNA-Seq of Cinnamomum camphora：plant with Seedling growth period root from China：Jiangsu,Nanjing，DFO3 ILLUMINA 7949397900 bp
SRR20738291 RNA-Seq of Cinnamomum camphora：plant with Seedling growth period root from China：Jiangsu,Nanjing，DFO2 ILLUMINA 7927090800 bp
SRR20738292 RNA-Seq of Cinnamomum camphora：plant with Seedling growth period root from China：Jiangsu,Nanjing，DFO1 ILLUMINA 9293365200 bp
SRR20738293 RNA-Seq of Cinnamomum camphora：plant with Seedling growth period root from China：Jiangsu,Nanjing，CK3 ILLUMINA 9014287800 bp
SRR20738294 RNA-Seq of Cinnamomum camphora：plant with Seedling growth period root from China：Jiangsu,Nanjing，CK2 ILLUMINA 7782087600 bp
SRR20738295 RNA-Seq of Cinnamomum camphora：plant with Seedling growth period root from China：Jiangsu,Nanjing，CK1 ILLUMINA 8757246600 bp
PRJNA909422 RNA-Seq analysis to study heat tolerance of Cinnamomum camphora from gene level Xu et al., 2022
8
Library Title Platform Total Base VCF File
SRR22558019 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，ZF1 ILLUMINA 6186076200 bp
SRR22558020 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，Z381 ILLUMINA 6825329400 bp
SRR22558021 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，Z281 ILLUMINA 6959691300 bp
SRR22558022 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，Z51 ILLUMINA 7064893200 bp
SRR22558023 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，AF1 ILLUMINA 7370811300 bp
SRR22558024 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，A381 ILLUMINA 6868165800 bp
SRR22558025 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，A281 ILLUMINA 6585860400 bp
SRR22558026 RNA-Seq of Cinnamomum camphora：Three month old plant with leave from China:Hangzhou，A51 ILLUMINA 7013390100 bp

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