Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA498587 Comparative transcriptomics analysis reveals genetic divergence and domestication genes in Diospyros oleifera -
1
Library Title Platform Total Base VCF File
SRR8114143 RNA-Seq of Diospyros oleifera:15 years plant at flowering stage and fruit stage with leaves, stems, flowers, fruits from China: Yangling city,'Youshi',Diospyros oleifera ILLUMINA 6891960000 bp
PRJNA532832 Using the Pacific Bioscience Sequel and Illumina HiSeq X Ten platforms to assemble genome of Diospyros oleifera Suo et al., 2020
15
Library Title Platform Total Base VCF File
SRR8981040 RNA-Seq of Diospyros oleifera:1 year plant with root from China:Henan,Diospyros oleifera,root ILLUMINA 9685212900 bp
SRR8981041 RNA-Seq of Diospyros oleifera:1 year plant with root from China:Henan,Diospyros oleifera,root2 ILLUMINA 9336648900 bp
SRR8981042 RNA-Seq of Diospyros oleifera:1 year plant with root from China:Henan,Diospyros oleifera,root1 ILLUMINA 7487775900 bp
SRR8981043 RNA-Seq of Diospyros oleifera:four years plant with stem from China:Henan,Diospyros oleifera,stem ILLUMINA 7966350300 bp
SRR8981044 RNA-Seq of Diospyros oleifera:four years plant with leaf from China:Henan,Diospyros oleifera,leaf2 ILLUMINA 8775834600 bp
SRR8981045 RNA-Seq of Diospyros oleifera:four years plant with leaf from China:Henan,Diospyros oleifera,leaf ILLUMINA 9047830500 bp
SRR8981046 RNA-Seq of Diospyros oleifera:four years plant with fruit from China:Henan,Diospyros oleifera,fruit ILLUMINA 7303506300 bp
SRR8981047 RNA-Seq of Diospyros oleifera:four years plant with leaf from China:Henan,Diospyros oleifera,leaf1 ILLUMINA 11067548100 bp
SRR8981048 RNA-Seq of Diospyros oleifera:four years plant with fruit from China:Henan,Diospyros oleifera,fruit1 ILLUMINA 6377650500 bp
SRR8981049 RNA-Seq of Diospyros oleifera:four years plant with fruit from China:Henan,Diospyros oleifera,fruit2 ILLUMINA 7343160300 bp
SRR8981064 RNA-Seq of Diospyros oleifera:four years plant with stem from China:Henan,Diospyros oleifera,stem2 ILLUMINA 8650121100 bp
SRR8981065 RNA-Seq of Diospyros oleifera:four years plant with stem from China:Henan,Diospyros oleifera,stem1 ILLUMINA 7623808500 bp
SRR8981066 RNA-Seq of Diospyros oleifera:four years plant with seed from China:Henan,Diospyros oleifera,seed ILLUMINA 6717524100 bp
SRR8981067 RNA-Seq of Diospyros oleifera:four years plant with seed from China:Henan,Diospyros oleifera,seed2 ILLUMINA 4282035300 bp
SRR8981068 RNA-Seq of Diospyros oleifera:four years plant with seed from China:Henan,Diospyros oleifera,seed1 ILLUMINA 5608833000 bp
PRJNA562043 A chromosome-scale genome assembly for Diospyros oleifera by integrating Illumina sequencing, single-molecule real-time sequencing, and high-throughput chromosome conformation capture techniques. Zhu et al., 2019
1
Library Title Platform Total Base VCF File
SRR10071597 RNA-Seq of Diospyros oleifera: leaf from China: Shaanxi,Youshi,T-03 ILLUMINA 11127108688 bp

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