Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
Others

Project

Bioproject Description Publication GVCF File Library Num.
PRJNA188506 Using mRNA sequencing to sample 6.1 × 109 reads from 19 trees and constructed a de novo pan-transcriptome reference that includes 173,882 tree-derived transcripts. Cronn et al., 2017
83
Library Title Platform Total Base VCF File
SRR669789 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077311 ILLUMINA 3028924249 bp
SRR669790 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077312 ILLUMINA 3154869633 bp
SRR669791 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077313 ILLUMINA 4863894875 bp
SRR669792 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077314 ILLUMINA 2168158516 bp
SRR669793 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077315 ILLUMINA 3332375921 bp
SRR669794 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077316 ILLUMINA 3241196757 bp
SRR669795 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077317 ILLUMINA 2810734959 bp
SRR669796 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077318 ILLUMINA 3444219180 bp
SRR669797 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077319 ILLUMINA 4079504736 bp
SRR669798 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077320 ILLUMINA 2908744349 bp
SRR669799 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077321 ILLUMINA 3753344325 bp
SRR669800 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077322 ILLUMINA 3844447234 bp
SRR669801 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077323 ILLUMINA 2539231102 bp
SRR669802 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077324 ILLUMINA 6211705333 bp
SRR669803 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077325 ILLUMINA 3422632046 bp
SRR669804 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077326 ILLUMINA 4861357755 bp
SRR669805 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077327 ILLUMINA 4441993534 bp
SRR669806 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077328 ILLUMINA 5324320747 bp
SRR669807 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077329 ILLUMINA 3246015467 bp
SRR669808 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077330 ILLUMINA 4790966007 bp
SRR669809 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077331 ILLUMINA 1699711527 bp
SRR669810 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077332 ILLUMINA 2288797865 bp
SRR669811 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077333 ILLUMINA 2670121345 bp
SRR669812 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077334 ILLUMINA 3489200641 bp
SRR669813 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077335 ILLUMINA 3571246476 bp
SRR669814 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077336 ILLUMINA 3802759383 bp
SRR669815 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077337 ILLUMINA 2580137617 bp
SRR669816 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077338 ILLUMINA 2613956659 bp
SRR669817 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077339 ILLUMINA 4039879103 bp
SRR669818 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077340 ILLUMINA 2266014689 bp
SRR669819 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077341 ILLUMINA 3188824924 bp
SRR669820 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077342 ILLUMINA 3048789939 bp
SRR669821 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077343 ILLUMINA 3795278111 bp
SRR669822 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077344 ILLUMINA 4745764467 bp
SRR669823 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077345 ILLUMINA 3454046076 bp
SRR669824 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077346 ILLUMINA 3390344669 bp
SRR669825 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077347 ILLUMINA 3960701769 bp
SRR669826 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077348 ILLUMINA 3216732032 bp
SRR669827 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077349 ILLUMINA 3183272146 bp
SRR669828 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077350 ILLUMINA 3482276586 bp
SRR669829 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077351 ILLUMINA 3118765163 bp
SRR669830 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077352 ILLUMINA 2901970885 bp
SRR669831 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077353 ILLUMINA 4222090577 bp
SRR669832 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077354 ILLUMINA 3007087948 bp
SRR669833 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077355 ILLUMINA 3131570751 bp
SRR669834 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077356 ILLUMINA 3256837920 bp
SRR669835 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077357 ILLUMINA 3731655080 bp
SRR669836 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077358 ILLUMINA 3352100110 bp
SRR669837 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077359 ILLUMINA 2932862745 bp
SRR669838 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077360 ILLUMINA 3444810939 bp
SRR669839 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077361 ILLUMINA 3146940931 bp
SRR669840 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077362 ILLUMINA 3725862730 bp
SRR669841 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077363 ILLUMINA 3158836004 bp
SRR669842 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077364 ILLUMINA 2641953657 bp
SRR669843 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077365 ILLUMINA 2889426685 bp
SRR669844 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077366 ILLUMINA 3070461610 bp
SRR669845 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077367 ILLUMINA 2525184628 bp
SRR669846 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077368 ILLUMINA 2948561882 bp
SRR669847 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077369 ILLUMINA 3593215087 bp
SRR669848 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077370 ILLUMINA 1902011598 bp
SRR669849 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077371 ILLUMINA 3013163401 bp
SRR669850 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077372 ILLUMINA 2162417474 bp
SRR669851 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077373 ILLUMINA 2257022659 bp
SRR669852 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077374 ILLUMINA 2765205472 bp
SRR669853 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077375 ILLUMINA 2075953394 bp
SRR669854 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077376 ILLUMINA 2433171709 bp
SRR669855 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077377 ILLUMINA 3808787770 bp
SRR669856 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077378 ILLUMINA 3777379800 bp
SRR669857 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077379 ILLUMINA 3323566398 bp
SRR669858 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077380 ILLUMINA 3211187536 bp
SRR669859 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077381 ILLUMINA 3128054335 bp
SRR669860 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077382 ILLUMINA 2554091434 bp
SRR669861 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077383 ILLUMINA 3856542590 bp
SRR669862 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077384 ILLUMINA 2870246482 bp
SRR669863 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077385 ILLUMINA 3069738349 bp
SRR669864 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077386 ILLUMINA 2736505009 bp
SRR669865 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077387 ILLUMINA 2813878786 bp
SRR669866 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077388 ILLUMINA 3283233260 bp
SRR669867 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077389 ILLUMINA 3431762143 bp
SRR669868 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077390 ILLUMINA 3138124035 bp
SRR669869 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077391 ILLUMINA 3035240284 bp
SRR669870 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077392 ILLUMINA 2723022317 bp
SRR669871 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,GSM1077393 ILLUMINA 3197592835 bp
PRJNA205561 Robust transcriptome quantitative RNA sequencing in Douglas-fir needle tissue -
4
Library Title Platform Total Base VCF File
SRR908307 RNA-Seq of Pseudotsuga menziesii: needle,INT2 ILLUMINA 3800940253 bp
SRR908308 RNA-Seq of Pseudotsuga menziesii: needle,COA1 ILLUMINA 1859048307 bp
SRR908309 RNA-Seq of Pseudotsuga menziesii: needle,COA2 ILLUMINA 5327395367 bp
SRR868709 RNA-Seq of Pseudotsuga menziesii: needle,INT1 ILLUMINA 1771230740 bp
PRJNA236536 Transcriptomics of seed development in Douglas-fir -
10
Library Title Platform Total Base VCF File
SRR1165404 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 5647095563 bp
SRR1165406 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 5648506481 bp
SRR1165407 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 6392854403 bp
SRR1165408 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 11956295817 bp
SRR1165409 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 7355918483 bp
SRR1165410 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 6396874421 bp
SRR1165411 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 7926442234 bp
SRR1165412 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 8124844135 bp
SRR1165413 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 13355283193 bp
SRR1165405 RNA-Seq of Pseudotsuga menziesii: Megagametophyte/embryo (fertilized with mixed pollen)plant with pollinated megagametophyte,GSM2202773 ILLUMINA 4325059971 bp
PRJNA243096 Pseudotsuga menziesii reference transcriptome and SNP variation -
69
Library Title Platform Total Base VCF File
SRR1284552 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-27Oct2010 ILLUMINA 3032289872 bp
SRR1284553 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-27Oct2010 ILLUMINA 3600251252 bp
SRR1284554 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-27Oct2010 ILLUMINA 3350625813 bp
SRR1284555 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-27Oct2010 ILLUMINA 2900900285 bp
SRR1284556 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-27Oct2010 ILLUMINA 3287264877 bp
SRR1284557 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-09Nov2010 ILLUMINA 2926776182 bp
SRR1284558 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-09Nov2010 ILLUMINA 3365583509 bp
SRR1284559 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-09Nov2010 ILLUMINA 1767516160 bp
SRR1284560 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-09Nov2010 ILLUMINA 2950508354 bp
SRR1284561 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-09Nov2010 ILLUMINA 3017415097 bp
SRR1284562 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-30Nov2010 ILLUMINA 3308477806 bp
SRR1284563 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-30Nov2010 ILLUMINA 3492974102 bp
SRR1284564 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-30Nov2010 ILLUMINA 3189348508 bp
SRR1284565 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-30Nov2010 ILLUMINA 3448562079 bp
SRR1284566 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-30Nov2010 ILLUMINA 3268195370 bp
SRR1284567 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-06Jan2011 ILLUMINA 3178791079 bp
SRR1284568 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-06Jan2011 ILLUMINA 3744829217 bp
SRR1284569 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-06Jan2011 ILLUMINA 3275706336 bp
SRR1284570 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-06Jan2011 ILLUMINA 2771991258 bp
SRR1284571 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-06Jan2011 ILLUMINA 3476113566 bp
SRR1284572 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-07Feb2011 ILLUMINA 2344362005 bp
SRR1284573 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-07Feb2011 ILLUMINA 2929807495 bp
SRR1284574 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-07Feb2011 ILLUMINA 2938066063 bp
SRR1284575 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-07Feb2011 ILLUMINA 2780491418 bp
SRR1284576 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-07Feb2011 ILLUMINA 2623027368 bp
SRR1284577 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-23Feb2011 ILLUMINA 4453973043 bp
SRR1284578 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-23Feb2011 ILLUMINA 4042538534 bp
SRR1284579 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-23Feb2011 ILLUMINA 1918351378 bp
SRR1284580 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-23Feb2011 ILLUMINA 3021433382 bp
SRR1284581 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-23Feb2011 ILLUMINA 2903503762 bp
SRR1284582 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-23Feb2011 ILLUMINA 3184191852 bp
SRR1284583 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-10Mar2011 ILLUMINA 2128474101 bp
SRR1284584 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-06May2011 ILLUMINA 2061135785 bp
SRR1284585 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-07Jul2011 ILLUMINA 3386969047 bp
SRR1284586 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-07Jul2011 ILLUMINA 3718547704 bp
SRR1284587 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-07Jul2011 ILLUMINA 3021979489 bp
SRR1284588 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-07Jul2011 ILLUMINA 3330264415 bp
SRR1284589 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-28Jul2011 ILLUMINA 3583541913 bp
SRR1284590 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-28Jul2011 ILLUMINA 1627738927 bp
SRR1284591 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-28Jul2011 ILLUMINA 1592459425 bp
SRR1284592 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-28Jul2011 ILLUMINA 2966337175 bp
SRR1284593 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-28Jul2011 ILLUMINA 3526346017 bp
SRR1284594 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-17Aug2011 ILLUMINA 2942124243 bp
SRR1284595 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-17Aug2011 ILLUMINA 4082870460 bp
SRR1284596 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-17Aug2011 ILLUMINA 3691784825 bp
SRR1284597 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-17Aug2011 ILLUMINA 3486890569 bp
SRR1284598 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-07Sep2011 ILLUMINA 1659575945 bp
SRR1284599 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-07Sep2011 ILLUMINA 2015883846 bp
SRR1284600 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-07Sep2011 ILLUMINA 1709340766 bp
SRR1284601 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-07Sep2011 ILLUMINA 3079738763 bp
SRR1284602 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-07Sep2011 ILLUMINA 2666497768 bp
SRR1284603 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-07Sep2011 ILLUMINA 629250402 bp
SRR1284604 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-07Sep2011 ILLUMINA 530620569 bp
SRR1284605 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-07Sep2011 ILLUMINA 433514826 bp
SRR1284606 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-07Sep2011 ILLUMINA 1357332031 bp
SRR1284607 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-07Sep2011 ILLUMINA 1145376562 bp
SRR1284608 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-07Oct2011 ILLUMINA 1870588579 bp
SRR1284609 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-07Oct2011 ILLUMINA 2583531520 bp
SRR1284610 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-07Oct2011 ILLUMINA 1148677949 bp
SRR1284611 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-07Oct2011 ILLUMINA 1852345858 bp
SRR1284612 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-26Oct2011 ILLUMINA 2118075343 bp
SRR1284613 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-26Oct2011 ILLUMINA 2381929056 bp
SRR1284614 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-26Oct2011 ILLUMINA 911970511 bp
SRR1284615 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-26Oct2011 ILLUMINA 1803094016 bp
SRR1284616 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO44-ORSI-10Nov2011 ILLUMINA 3666653298 bp
SRR1284617 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO89-ORSI-10Nov2011 ILLUMINA 2399217428 bp
SRR1284618 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO90-ORSI-10Nov2011 ILLUMINA 2834871333 bp
SRR1284619 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO46-ORSI-09Nov2010 ILLUMINA 9372463872 bp
SRR5170510 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,CCTO43-ORSI-17Jun2011 ILLUMINA 917338156 bp
PRJNA263611 Pseudotsuga menziesii (Mirb.) Franco Diurnal RNA-Seq -
83
Library Title Platform Total Base VCF File
SRR2669190 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-0000 ILLUMINA 3091856743 bp
SRR2669191 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-0400 ILLUMINA 2427560654 bp
SRR2669192 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-0800 ILLUMINA 1763450607 bp
SRR2669193 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-1200 ILLUMINA 2709998872 bp
SRR2669194 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-1600 ILLUMINA 3122073620 bp
SRR2669195 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-2000 ILLUMINA 3314953118 bp
SRR2669196 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-2400 ILLUMINA 2765163759 bp
SRR2669197 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-2800 ILLUMINA 3492476475 bp
SRR2669198 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-3200 ILLUMINA 3279594836 bp
SRR2669199 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-3600 ILLUMINA 3621180472 bp
SRR2669200 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-4000 ILLUMINA 3073140938 bp
SRR2669201 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1A-4400 ILLUMINA 3019250166 bp
SRR2669202 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-0000 ILLUMINA 1856971456 bp
SRR2669203 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-0400 ILLUMINA 2926319763 bp
SRR2669204 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-1200 ILLUMINA 2450405743 bp
SRR2669205 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-1600 ILLUMINA 3115460443 bp
SRR2669206 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-2000 ILLUMINA 3106485684 bp
SRR2669207 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-2400 ILLUMINA 3069539177 bp
SRR2669208 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-2800 ILLUMINA 2815706583 bp
SRR2669209 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-3200 ILLUMINA 3576399900 bp
SRR2669210 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-3600 ILLUMINA 3690543232 bp
SRR2669211 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-4000 ILLUMINA 4673154557 bp
SRR2669212 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-4400 ILLUMINA 3715481445 bp
SRR2669213 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-0400 ILLUMINA 3166024174 bp
SRR2669214 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-1600 ILLUMINA 1901328737 bp
SRR2669215 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-2000 ILLUMINA 4769968612 bp
SRR2669216 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-2400 ILLUMINA 4044272704 bp
SRR2669217 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-2800 ILLUMINA 2666495243 bp
SRR2669218 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-3200 ILLUMINA 3296057432 bp
SRR2669219 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-3600 ILLUMINA 3269845609 bp
SRR2669220 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-4000 ILLUMINA 4212641522 bp
SRR2669221 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-4400 ILLUMINA 4329279453 bp
SRR2669222 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-0000 ILLUMINA 3228416520 bp
SRR2669223 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-1600 ILLUMINA 2766085081 bp
SRR2669224 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-2000 ILLUMINA 3820569016 bp
SRR2669225 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-2400 ILLUMINA 2501230761 bp
SRR2669226 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-2800 ILLUMINA 2640605004 bp
SRR2669227 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-3200 ILLUMINA 2533714785 bp
SRR2669228 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-3600 ILLUMINA 5388850758 bp
SRR2669229 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-4000 ILLUMINA 3042056976 bp
SRR2669230 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-4400 ILLUMINA 2775705230 bp
SRR2669231 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-0000 ILLUMINA 3350626318 bp
SRR2669232 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-0400 ILLUMINA 3662011641 bp
SRR2669233 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-0800 ILLUMINA 4504312958 bp
SRR2669234 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-1200 ILLUMINA 2178919460 bp
SRR2669235 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-1600 ILLUMINA 7315931768 bp
SRR2669236 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-2000 ILLUMINA 2034574704 bp
SRR2669237 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-2400 ILLUMINA 2653227883 bp
SRR2669238 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-3200 ILLUMINA 3386315274 bp
SRR2669239 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-3600 ILLUMINA 3412315704 bp
SRR2669240 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-4000 ILLUMINA 2885596260 bp
SRR2669241 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-4400 ILLUMINA 4377234758 bp
SRR2669242 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-0000 ILLUMINA 3183310930 bp
SRR2669243 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-0400 ILLUMINA 4515328624 bp
SRR2669244 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-0800 ILLUMINA 3790379207 bp
SRR2669245 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-1200 ILLUMINA 3505234189 bp
SRR2669246 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-1600 ILLUMINA 2474070548 bp
SRR2669247 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-2000 ILLUMINA 2784681807 bp
SRR2669248 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-3600 ILLUMINA 3871800761 bp
SRR2669249 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-4000 ILLUMINA 3562193745 bp
SRR2669250 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-4400 ILLUMINA 2468959140 bp
SRR2669168 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-0800 ILLUMINA 1056473938 bp
SRR2669169 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal1B-0800 ILLUMINA 2826251185 bp
SRR2669170 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-0000 ILLUMINA 1331095059 bp
SRR2669171 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-0000 ILLUMINA 2937675395 bp
SRR2669172 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-0800 ILLUMINA 712248061 bp
SRR2669173 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-0800 ILLUMINA 2727930816 bp
SRR2669174 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-1200 ILLUMINA 1345243442 bp
SRR2669175 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2A-1200 ILLUMINA 5654605998 bp
SRR2669176 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-0400 ILLUMINA 3179705432 bp
SRR2669177 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-0400 ILLUMINA 2744778222 bp
SRR2669178 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-0800 ILLUMINA 3141097677 bp
SRR2669179 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-0800 ILLUMINA 2725038479 bp
SRR2669180 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-1200 ILLUMINA 3005409732 bp
SRR2669181 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal2B-1200 ILLUMINA 2582748366 bp
SRR2669182 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-2800 ILLUMINA 1479989663 bp
SRR2669183 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3A-2800 ILLUMINA 7792664090 bp
SRR2669184 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-2400 ILLUMINA 4920220656 bp
SRR2669185 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-2400 ILLUMINA 6930277610 bp
SRR2669186 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-2800 ILLUMINA 44541 bp
SRR2669187 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-2800 ILLUMINA 1875196199 bp
SRR2669188 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-3200 ILLUMINA 1544754095 bp
SRR2669189 RNA-Seq of Pseudotsuga menziesii: needle tissue from prior years growth,diurnal3B-3200 ILLUMINA 4317429527 bp
PRJNA296922 Using deep RNA sequencing to investigate plasticity of gene expression in needle tissue between two Douglas-fir provenances represented by 25 adult trees Hess et al., 2020
83
Library Title Platform Total Base VCF File
SRR2515918 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893267 ILLUMINA 8613886800 bp
SRR2515919 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893268 ILLUMINA 9065617200 bp
SRR2515920 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893269 ILLUMINA 7716305400 bp
SRR2515921 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893270 ILLUMINA 7075431000 bp
SRR2515922 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893271 ILLUMINA 5781292400 bp
SRR2515923 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893272 ILLUMINA 8006857600 bp
SRR2515924 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893273 ILLUMINA 7905214000 bp
SRR2515925 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893274 ILLUMINA 7936694000 bp
SRR2515926 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893275 ILLUMINA 7698604000 bp
SRR2515927 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893276 ILLUMINA 5784716000 bp
SRR2515928 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893277 ILLUMINA 5486978800 bp
SRR2515929 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893278 ILLUMINA 6069539200 bp
SRR2515930 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893279 ILLUMINA 8132216000 bp
SRR2515931 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893280 ILLUMINA 2484741800 bp
SRR2515932 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893280 ILLUMINA 3510204600 bp
SRR2515933 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893281 ILLUMINA 6494230600 bp
SRR2515934 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893281 ILLUMINA 6818110800 bp
SRR2515935 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893282 ILLUMINA 9176089200 bp
SRR2515936 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893283 ILLUMINA 8313344400 bp
SRR2515937 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893284 ILLUMINA 7604104200 bp
SRR2515938 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893285 ILLUMINA 9002315000 bp
SRR2515939 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893286 ILLUMINA 6873528000 bp
SRR2515940 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893287 ILLUMINA 5947507400 bp
SRR2515941 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893288 ILLUMINA 7124009600 bp
SRR2515942 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893289 ILLUMINA 6180127200 bp
SRR2515943 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893290 ILLUMINA 7596156000 bp
SRR2515944 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893291 ILLUMINA 4602528200 bp
SRR2515945 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893291 ILLUMINA 6011755600 bp
SRR2515946 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893292 ILLUMINA 5768281200 bp
SRR2515947 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893293 ILLUMINA 8943492400 bp
SRR2515948 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893294 ILLUMINA 5347468200 bp
SRR2515949 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893295 ILLUMINA 11287651800 bp
SRR2515950 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893295 ILLUMINA 13961707000 bp
SRR2515951 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893296 ILLUMINA 8768881200 bp
SRR2515952 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893296 ILLUMINA 12657712000 bp
SRR2515953 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893297 ILLUMINA 11160443600 bp
SRR2515954 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893298 ILLUMINA 7922279800 bp
SRR2515955 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893299 ILLUMINA 7900202600 bp
SRR2515956 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893300 ILLUMINA 6921555000 bp
SRR2515957 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893301 ILLUMINA 8257563400 bp
SRR2515958 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893302 ILLUMINA 3390176400 bp
SRR2515959 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893302 ILLUMINA 2373557200 bp
SRR2515960 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893303 ILLUMINA 4106445000 bp
SRR2515961 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893303 ILLUMINA 4157475200 bp
SRR2515962 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893304 ILLUMINA 7597577600 bp
SRR2515963 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893305 ILLUMINA 10574161000 bp
SRR2515964 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893306 ILLUMINA 8724448600 bp
SRR2515965 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893307 ILLUMINA 7685408800 bp
SRR2515966 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893308 ILLUMINA 5573712600 bp
SRR2515967 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893309 ILLUMINA 9407402200 bp
SRR2515968 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893310 ILLUMINA 9949003800 bp
SRR2515969 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893311 ILLUMINA 8296686000 bp
SRR2515970 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893312 ILLUMINA 8332158200 bp
SRR2515971 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893313 ILLUMINA 7936543000 bp
SRR2515972 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893314 ILLUMINA 9657448000 bp
SRR2515973 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893315 ILLUMINA 7826113800 bp
SRR2515974 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893316 ILLUMINA 5576546800 bp
SRR2515975 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893317 ILLUMINA 9827685200 bp
SRR2515976 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893318 ILLUMINA 8124262400 bp
SRR2515977 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893319 ILLUMINA 7616074800 bp
SRR2515978 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893320 ILLUMINA 7684108600 bp
SRR2515979 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893321 ILLUMINA 4900686200 bp
SRR2515980 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893322 ILLUMINA 7312911800 bp
SRR2515981 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893323 ILLUMINA 7675003000 bp
SRR2515982 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893324 ILLUMINA 9293367200 bp
SRR2515983 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893325 ILLUMINA 8462615000 bp
SRR2515984 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893326 ILLUMINA 8929468800 bp
SRR2515985 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893327 ILLUMINA 9711185800 bp
SRR2515986 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893328 ILLUMINA 7921531200 bp
SRR2515987 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893329 ILLUMINA 8783591400 bp
SRR2515988 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893330 ILLUMINA 9936244200 bp
SRR2515989 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893331 ILLUMINA 8432579600 bp
SRR2515990 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893332 ILLUMINA 8763760800 bp
SRR2515991 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893333 ILLUMINA 5498343200 bp
SRR2515992 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893334 ILLUMINA 9667694000 bp
SRR2515993 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893335 ILLUMINA 9432021200 bp
SRR2515994 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893336 ILLUMINA 9104041800 bp
SRR2515995 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893337 ILLUMINA 11559650200 bp
SRR2515996 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893338 ILLUMINA 10588216400 bp
SRR2515997 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893339 ILLUMINA 8187782400 bp
SRR2515998 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893339 ILLUMINA 11280121000 bp
SRR2515999 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893340 ILLUMINA 7893119800 bp
SRR2516000 RNA-Seq of Pseudotsuga menziesii: adultplant with needle,GSM1893341 ILLUMINA 6533137600 bp
PRJNA421903 RNA-seq of plants exposed to engineered nanomaterials Reichman et al., 2018
59
Library Title Platform Total Base VCF File
SRR6365608 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883092 ILLUMINA 1224000000 bp
SRR6365609 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883092 ILLUMINA 1224000000 bp
SRR6365610 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883092 ILLUMINA 805930560 bp
SRR6365611 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883093 ILLUMINA 1224000000 bp
SRR6365612 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883093 ILLUMINA 1224000000 bp
SRR6365613 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883093 ILLUMINA 581073804 bp
SRR6365614 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883094 ILLUMINA 1224000000 bp
SRR6365615 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883094 ILLUMINA 925642452 bp
SRR6365616 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883095 ILLUMINA 1224000000 bp
SRR6365617 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883095 ILLUMINA 1224000000 bp
SRR6365618 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883095 ILLUMINA 178187370 bp
SRR6365619 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883096 ILLUMINA 1224000000 bp
SRR6365620 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883096 ILLUMINA 1224000000 bp
SRR6365621 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883096 ILLUMINA 285474846 bp
SRR6365622 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883097 ILLUMINA 1224000000 bp
SRR6365623 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883097 ILLUMINA 1038398352 bp
SRR6365624 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883098 ILLUMINA 1224000000 bp
SRR6365625 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883098 ILLUMINA 1224000000 bp
SRR6365626 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883098 ILLUMINA 88449606 bp
SRR6365627 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883099 ILLUMINA 1224000000 bp
SRR6365628 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883099 ILLUMINA 16767474 bp
SRR6365629 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883100 ILLUMINA 1224000000 bp
SRR6365630 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883100 ILLUMINA 225350334 bp
SRR6365631 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883101 ILLUMINA 1224000000 bp
SRR6365632 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883101 ILLUMINA 429902256 bp
SRR6365633 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883102 ILLUMINA 1224000000 bp
SRR6365634 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883102 ILLUMINA 1224000000 bp
SRR6365635 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883102 ILLUMINA 1224000000 bp
SRR6365636 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883102 ILLUMINA 658610940 bp
SRR6365637 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883103 ILLUMINA 1224000000 bp
SRR6365638 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883103 ILLUMINA 1184382894 bp
SRR6365639 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883104 ILLUMINA 1224000000 bp
SRR6365640 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883104 ILLUMINA 723293322 bp
SRR6365641 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883105 ILLUMINA 1155233946 bp
SRR6365642 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883106 ILLUMINA 1224000000 bp
SRR6365643 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883106 ILLUMINA 1224000000 bp
SRR6365644 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883106 ILLUMINA 886366740 bp
SRR6365645 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883107 ILLUMINA 1224000000 bp
SRR6365646 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883107 ILLUMINA 1224000000 bp
SRR6365647 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883107 ILLUMINA 357305592 bp
SRR6365648 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883108 ILLUMINA 1224000000 bp
SRR6365649 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883108 ILLUMINA 392295162 bp
SRR6365650 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883109 ILLUMINA 1224000000 bp
SRR6365651 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883109 ILLUMINA 551466468 bp
SRR6365652 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883110 ILLUMINA 1224000000 bp
SRR6365653 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883110 ILLUMINA 1224000000 bp
SRR6365654 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883110 ILLUMINA 174096150 bp
SRR6365655 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883111 ILLUMINA 1101577866 bp
SRR6365656 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883112 ILLUMINA 1088275536 bp
SRR6365657 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883113 ILLUMINA 1224000000 bp
SRR6365658 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883113 ILLUMINA 930059868 bp
SRR6365659 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883114 ILLUMINA 1224000000 bp
SRR6365660 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883114 ILLUMINA 406819350 bp
SRR6365661 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883115 ILLUMINA 362463834 bp
SRR6365662 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883116 ILLUMINA 1224000000 bp
SRR6365663 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883116 ILLUMINA 1078837476 bp
SRR6365664 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883117 ILLUMINA 1224000000 bp
SRR6365665 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883117 ILLUMINA 1224000000 bp
SRR6365666 RNA-Seq of Pseudotsuga menziesii: needles,GSM2883117 ILLUMINA 688814364 bp
PRJNA429543 Phylotranscriptome analyses to study the evolutionary history of Pinaceae -
1
Library Title Platform Total Base VCF File
SRR6784820 RNA-Seq of Pseudotsuga menziesii: leave from China: Institute of Botany\, the Chinese Academy of Science\, Beijing,Pseudotsuga ILLUMINA 9918991728 bp
PRJNA491234 Read from RNASeq of Douglas-fir embryogenic and non embryogenic masses Gautier et al., 2019
58
Library Title Platform Total Base VCF File
SRR7841684 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,I7 ILLUMINA 10957090788 bp
SRR7841685 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,E4 ILLUMINA 10051753320 bp
SRR7841686 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,E7 ILLUMINA 9779198184 bp
SRR7841687 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,E16 ILLUMINA 12552276492 bp
SRR7841688 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,E17 ILLUMINA 11020588236 bp
SRR7841689 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,G10 ILLUMINA 9455499648 bp
SRR7841690 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,G13 ILLUMINA 11649917916 bp
SRR7841691 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,G1 ILLUMINA 9893476908 bp
SRR7841692 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,G7 ILLUMINA 8823963708 bp
SRR7841693 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,H1 ILLUMINA 11921520996 bp
SRR7841694 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,H4 ILLUMINA 10232129880 bp
SRR7841695 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C31 ILLUMINA 9150038604 bp
SRR7841696 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C33 ILLUMINA 12323772468 bp
SRR7841697 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C34 ILLUMINA 11707489584 bp
SRR7841698 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C36 ILLUMINA 14542556868 bp
SRR7841699 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C40 ILLUMINA 13561689708 bp
SRR7841700 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C44 ILLUMINA 9311935752 bp
SRR7841701 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,C47 ILLUMINA 10887083424 bp
SRR7841702 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,D1 ILLUMINA 11597657652 bp
SRR7841703 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,D2 ILLUMINA 5444891928 bp
SRR7841704 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,D11 ILLUMINA 14378043960 bp
SRR7841705 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B35 ILLUMINA 6958871640 bp
SRR7841706 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B29 ILLUMINA 12787885656 bp
SRR7841707 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B23 ILLUMINA 7380604476 bp
SRR7841708 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B17 ILLUMINA 15347340288 bp
SRR7841709 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B10 ILLUMINA 14120163540 bp
SRR7841710 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B3 ILLUMINA 11173784580 bp
SRR7841711 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B2 ILLUMINA 13132071036 bp
SRR7841712 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,B1 ILLUMINA 13956761952 bp
SRR7841713 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,I13 ILLUMINA 9329806836 bp
SRR7841714 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B39 ILLUMINA 16564282812 bp
SRR7841715 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B36 ILLUMINA 6628246884 bp
SRR7841716 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,H16 ILLUMINA 9133950168 bp
SRR7841717 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,H7 ILLUMINA 10429020000 bp
SRR7841718 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,I4 ILLUMINA 9931345956 bp
SRR7841719 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,H17 ILLUMINA 10271926476 bp
SRR7841720 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,C23 ILLUMINA 13888922796 bp
SRR7841721 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,C18 ILLUMINA 8110031832 bp
SRR7841722 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,I17 ILLUMINA 10877345388 bp
SRR7841723 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,I16 ILLUMINA 10937121552 bp
SRR7841724 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,C2 ILLUMINA 10784340000 bp
SRR7841725 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,C1 ILLUMINA 12841800804 bp
SRR7841726 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,C13 ILLUMINA 11585126196 bp
SRR7841727 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,C8 ILLUMINA 11208746556 bp
SRR7841728 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B51 ILLUMINA 10257647904 bp
SRR7841729 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B45 ILLUMINA 11711295792 bp
SRR7841730 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B60 ILLUMINA 6334129368 bp
SRR7841731 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,B55 ILLUMINA 9464641200 bp
SRR7841732 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D45 ILLUMINA 10254661956 bp
SRR7841733 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D42 ILLUMINA 12114926712 bp
SRR7841734 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D37 ILLUMINA 9446547096 bp
SRR7841735 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D33 ILLUMINA 11443381236 bp
SRR7841736 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D27 ILLUMINA 12069711360 bp
SRR7841737 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D22 ILLUMINA 11718861588 bp
SRR7841738 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,D17 ILLUMINA 8450938188 bp
SRR7841739 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,D14 ILLUMINA 10583069112 bp
SRR7841740 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with embryonal masse from France: Orleans,E10 ILLUMINA 10480781052 bp
SRR7841741 RNA-Seq of Pseudotsuga menziesii:2 weeks immature embryon with non-embryogenic from France: Orleans,D47 ILLUMINA 9334135440 bp
PRJNA614528 Long read sequencing of RNA from Douglas-fir needles to predict transcripts, transcription factors and long non-coding RNA. Reference transcriptome generated was used to improve exisiting genome annotation. Velasco et al., 2023
8
Library Title Platform Total Base VCF File
SRR12208320 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Tsowwin River\, British Columbia,Psme.Coa.Tso.C ILLUMINA 41623273822 bp
SRR12208321 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Little Elk Creek\, British Columbia,Psme.Int.Lit.HD ILLUMINA 35342409446 bp
SRR12208322 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Little Elk Creek\, British Columbia,Psme.Int.Lit.C ILLUMINA 20851324356 bp
SRR12208324 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Tsowwin River\, British Columbia,Psme.Coa.Tso.C PACBIO_SMRT 22569634410 bp
SRR12208325 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Little Elk Creek\, British Columbia,Psme.Int.Lit.HD PACBIO_SMRT 22151205319 bp
SRR12208326 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Little Elk Creek\, British Columbia,Psme.Int.Lit.C PACBIO_SMRT 23494699550 bp
SRR12208319 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Meldrum Creek\, British Columbia,Psme.Int.Mel.HD ILLUMINA 18503297970 bp
SRR12208323 RNA-Seq of Pseudotsuga menziesii:2 years Vegetative plant with needles from Canada: Meldrum Creek\, British Columbia,Psme.Int.Mel.HD PACBIO_SMRT 22394998304 bp
PRJNA744263 multiple species for bioinformatic testing Raw sequence reads to quantify the ability of exome capture pool-seq to estimate allele frequencies of populations for two conifer species. Lind B et al., 2020
2
Library Title Platform Total Base VCF File
SRR15076474 RNA-Seq of Pseudotsuga menziesii: juvenile plant with needle tissue from USA:California,HI.4453.008.Index_9.L-17 ILLUMINA 41296968200 bp
SRR15076475 RNA-Seq of Pseudotsuga menziesii: juvenile plant with needle tissue from USA:California,HI.4453.008.Index_3.H-16 ILLUMINA 32090170800 bp
PRJNA945886 mRNAs of individus with a same genotype, collected for 3 distinct wood zones (outer sapwood, inner sapwood and transition zone ) and for the 4 vegetation seasons represent the set of data used for understand in a same time Delourme et al., 2023
47
Library Title Platform Total Base VCF File
SRR23891470 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,36C ILLUMINA 11337004728 bp
SRR23891471 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,39A1 ILLUMINA 11740024548 bp
SRR23891472 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,39A2 ILLUMINA 10195241616 bp
SRR23891473 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,39A3 ILLUMINA 10638072144 bp
SRR23891474 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,39B ILLUMINA 9449674416 bp
SRR23891475 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,39C ILLUMINA 11072060748 bp
SRR23891476 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,21A2 ILLUMINA 7721312508 bp
SRR23891477 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,21A3 ILLUMINA 11537890056 bp
SRR23891478 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,21B ILLUMINA 16631970768 bp
SRR23891479 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,21C ILLUMINA 19030991112 bp
SRR23891480 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,23A1 ILLUMINA 11802108780 bp
SRR23891481 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,36A2 ILLUMINA 13031216604 bp
SRR23891482 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,16C ILLUMINA 12339721044 bp
SRR23891483 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,36A1 ILLUMINA 8850975840 bp
SRR23891484 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,34C ILLUMINA 5085811080 bp
SRR23891485 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,34B ILLUMINA 11871167616 bp
SRR23891486 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,34A3 ILLUMINA 10745482104 bp
SRR23891487 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,34A2 ILLUMINA 9698003028 bp
SRR23891488 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,33C ILLUMINA 9413448660 bp
SRR23891489 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,33B ILLUMINA 14684261004 bp
SRR23891490 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,33A3 ILLUMINA 8844950772 bp
SRR23891491 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,33A2 ILLUMINA 10923961608 bp
SRR23891492 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,33A1 ILLUMINA 10959925788 bp
SRR23891493 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,16A3 ILLUMINA 10555674948 bp
SRR23891494 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,32C ILLUMINA 8214186960 bp
SRR23891495 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,32B ILLUMINA 18693254916 bp
SRR23891496 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,32A3 ILLUMINA 14866467840 bp
SRR23891497 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,32A2 ILLUMINA 6621968556 bp
SRR23891498 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,32A1 ILLUMINA 10102199436 bp
SRR23891499 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,28C ILLUMINA 11277262836 bp
SRR23891500 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,28B ILLUMINA 12082656096 bp
SRR23891501 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,28A3 ILLUMINA 11734612344 bp
SRR23891502 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,28A2 ILLUMINA 11312081172 bp
SRR23891503 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,26C ILLUMINA 9769260816 bp
SRR23891504 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,16A1 ILLUMINA 11418307236 bp
SRR23891505 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,26A3 ILLUMINA 9927791244 bp
SRR23891506 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,25C ILLUMINA 8951364324 bp
SRR23891507 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,25B ILLUMINA 9930478824 bp
SRR23891508 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,25A3 ILLUMINA 16123454172 bp
SRR23891509 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,25A2 ILLUMINA 10265365656 bp
SRR23891510 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,25A1 ILLUMINA 14045867892 bp
SRR23891511 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with transition zone from France: Gimel,23C ILLUMINA 10811189340 bp
SRR23891512 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,23B ILLUMINA 17590402116 bp
SRR23891513 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,23A3 ILLUMINA 11741518908 bp
SRR23891514 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,23A2 ILLUMINA 18113742360 bp
SRR23891515 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with inner sapwood from France: Gimel,9B ILLUMINA 20675025504 bp
SRR23891516 RNA-Seq of Pseudotsuga menziesii:25 years adult plant with outer sapwood from France: Gimel,9A3 ILLUMINA 3584462112 bp

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