Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
PRJNA354971 |
Populus pruinosa transcriptome raw sequence reads of four tissues: leaf, phloem, xylem and root |
- |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR5055908 |
RNA-Seq of Populus pruinosa: 1 year plant with phloem from China: Lanzhou |
ILLUMINA |
10902361500 bp |
|
SRR5055909 |
RNA-Seq of Populus pruinosa: 1 year plant with phloem from China: Lanzhou |
ILLUMINA |
9927496000 bp |
|
SRR5055910 |
RNA-Seq of Populus pruinosa: 1 year plant with phloem from China: Lanzhou |
ILLUMINA |
9927496000 bp |
|
SRR5055923 |
RNA-Seq of Populus pruinosa: 1 year plant with phloem from China: Lanzhou |
ILLUMINA |
11616853500 bp |
|
SRR5055924 |
RNA-Seq of Populus pruinosa: 1 year plant with phloem from China: Lanzhou |
ILLUMINA |
11366955250 bp |
|
|
PRJNA403986 |
Populus pruinosa transcriptome raw sequence reads from four tissues |
- |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR6024998 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
30872536250 bp |
|
SRR6025028 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
34859812500 bp |
|
SRR6025029 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
35281367500 bp |
|
SRR6025129 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
34591736750 bp |
|
SRR6025130 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
32997817000 bp |
|
SRR6025179 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
30938807750 bp |
|
SRR6025193 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
34325907250 bp |
|
SRR6025194 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
34899369250 bp |
|
SRR6025195 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
34340208000 bp |
|
SRR6025196 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
36472328750 bp |
|
SRR6025197 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
35996758000 bp |
|
SRR6025198 |
RNA-Seq of Populus pruinosa: 2 years plant with leaf from China: Xinjiang |
ILLUMINA |
33447034250 bp |
|
|
PRJNA484685 |
RNA-seq of seed germiantion from Populus euphratica and Populus pruinosa under salt stress |
Zhang et al., 2019 |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR8741513 |
RNA-Seq of Populus pruinosa: germinating seeds from China: Gansu |
ILLUMINA |
3897113000 bp |
|
SRR8741515 |
RNA-Seq of Populus pruinosa: germinating seeds from China: Gansu |
ILLUMINA |
4710966500 bp |
|
SRR8741516 |
RNA-Seq of Populus pruinosa: germinating seeds from China: Gansu |
ILLUMINA |
3693348500 bp |
|
SRR8741517 |
RNA-Seq of Populus pruinosa: germinating seeds from China: Gansu |
ILLUMINA |
4606120750 bp |
|
SRR8741519 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
4728519250 bp |
|
SRR8741520 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
4920058250 bp |
|
SRR8741523 |
RNA-Seq of Populus pruinosa: dry seeds from China: Gansu |
ILLUMINA |
5548275250 bp |
|
SRR8741534 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
5774042500 bp |
|
SRR8741536 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
4963071000 bp |
|
SRR8741512 |
RNA-Seq of Populus pruinosa: dry seeds from China: Gansu |
ILLUMINA |
5484472750 bp |
|
SRR8741514 |
RNA-Seq of Populus pruinosa: germinating seeds from China: Gansu |
ILLUMINA |
4532206750 bp |
|
SRR8741518 |
RNA-Seq of Populus pruinosa: germinating seeds from China: Gansu |
ILLUMINA |
3412979750 bp |
|
SRR8741521 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
4679575500 bp |
|
SRR8741522 |
RNA-Seq of Populus pruinosa: dry seeds from China: Gansu |
ILLUMINA |
5400834750 bp |
|
SRR8741532 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
5936313000 bp |
|
SRR8741533 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
5843584000 bp |
|
SRR8741535 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
5791142500 bp |
|
SRR8741537 |
RNA-Seq of Populus pruinosa: germinated seeds from China: Gansu |
ILLUMINA |
6074199500 bp |
|
|
PRJNA863418 |
A chromosome-level reference genome of P. pruinosa (v2.0) with 521.09 Mb and a contig N50 of 21.06 Mb by combining PacBio sequencing with Hi-C technologies were reported. |
- |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR20725209 |
RNA-Seq Populus pruinosa: female sexual maturity of trees with broad ovate leaves from China: Alaer, HY_101LC |
ILLUMINA |
6800805000 bp |
|
SRR20725212 |
RNA-Seq Populus pruinosa: female sexual maturity of trees with fruits from China: Alaer, HY_101F |
ILLUMINA |
6826008000 bp |
|
SRR20725210 |
RNA-Seq Populus pruinosa: female sexual maturity of trees with round leaves from China: Alaer, HY_101LB |
ILLUMINA |
6213033900 bp |
|
SRR20725211 |
RNA-Seq Populus pruinosa: female sexual maturity of trees with oblong leaves from China: Alaer, HY_101LA |
ILLUMINA |
6579250200 bp |
|
SRR20725213 |
RNA-Seq Populus pruinosa: female sexual maturity of trees with shoots from China: Alaer, HY_101S |
ILLUMINA |
6389446200 bp |
|
SRR20997708 |
RNA-Seq Populus pruinosa: water treatment seedling with whole plant from China: Alaer, huiCK |
BGISEQ |
6703641300 bp |
|
SRR20997709 |
RNA-Seq Populus pruinosa: water treatment seedling with whole plant from China: Alaer, huiCK |
BGISEQ |
7395054300 bp |
|
SRR20997710 |
RNA-Seq Populus pruinosa: water treatment seedling with whole plant from China: Alaer, huiCK |
BGISEQ |
6491028600 bp |
|
SRR20997711 |
RNA-Seq Populus pruinosa: 0.3mol/L NaCl solution treatment seedling with whole plant from China: Alaer, hui_0_3 |
BGISEQ |
8828125800 bp |
|
SRR20997712 |
RNA-Seq Populus pruinosa: 0.3mol/L NaCl solution treatment seedling with whole plant from China: Alaer, hui_0_3 |
BGISEQ |
5693078700 bp |
|
SRR20997713 |
RNA-Seq Populus pruinosa: 0.3mol/L NaCl solution treatment seedling with whole plant from China: Alaer, hui_0_3 |
BGISEQ |
7737187200 bp |
|
SRR26089376 |
RNA-Seq Populus pruinosa: 4 years plant with seed from China: Alaer, P.pruinosa_D |
BGISEQ |
6122692500 bp |
|
SRR26089377 |
RNA-Seq Populus pruinosa: 4 years plant with seed from China: Alaer, P.pruinosa_D |
BGISEQ |
5784909600 bp |
|
SRR26089378 |
RNA-Seq Populus pruinosa: 4 years plant with seed from China: Alaer, P.pruinosa_D |
BGISEQ |
6184674900 bp |
|
|
PRJNA890019 |
Sequencing of mRNA from oblong leaves, round leaves and broad ovate leaves reveals the molecular mechanism of leaf shape development regulation in Populus pruinosa |
- |
|
|
Library |
Title |
Platform |
Total Base |
VCF File |
SRR21887193 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with broad ovate leaves from China: Alaer, HY_LC |
ILLUMINA |
6264477600 bp |
|
SRR21887194 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with broad ovate leaves from China: Alaer, HY_LC |
ILLUMINA |
6421394400 bp |
|
SRR21887195 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with broad ovate leaves from China: Alaer, HY_LC |
ILLUMINA |
6800805000 bp |
|
SRR21887196 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with round leaves from China: Alaer, HY_LB |
ILLUMINA |
6676251300 bp |
|
SRR21887197 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with round leaves from China: Alaer, HY_LB |
ILLUMINA |
7110330600 bp |
|
SRR21887198 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with round leaves from China: Alaer, HY_LB |
ILLUMINA |
6213033900 bp |
|
SRR21887199 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with oblong leaves from China: Alaer, HY_LA |
ILLUMINA |
6651872400 bp |
|
SRR21887200 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with oblong leaves from China: Alaer, HY_LA |
ILLUMINA |
6826970400 bp |
|
SRR21887201 |
RNA-Seq of Populus pruinosa: female sexual maturity of trees with oblong leaves from China: Alaer, HY_LA |
ILLUMINA |
6579250200 bp |
|
|