Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA544153 Transcriptome variation patterns of poplar under exogenous 6-BA treatment -
587
Library Title Platform Total Base VCF File
SRR10947460 RNA-Seq of Populus tomentosa: leaves from annual branch from China: Shandong, 1-6BA-3 ILLUMINA 8342774400 bp
SRR10947462 RNA-Seq of Populus tomentosa: leaves from annual branch from China: Shandong, 1-6BA-1 ILLUMINA 14702834800 bp
SRR10947461 RNA-Seq of Populus tomentosa: leaves from annual branch from China: Shandong, 1-6BA-2 ILLUMINA 7365327300 bp
SRR10947463 RNA-Seq of Populus tomentosa: leaves from annual branch from China: Shandong, 1-CK-3 ILLUMINA 7187424000 bp
SRR10947472 RNA-Seq of Populus tomentosa: leaves from annual branch from China: Shandong, 1-CK-2 ILLUMINA 8829329100 bp
SRR10947473 RNA-Seq of Populus tomentosa: leaves from annual branch from China: Shandong, 1-CK-1 ILLUMINA 15303865800 bp
PRJNA647242 Differences in gene alternative splicing (AS) events of Populus tomentosa at four different temperatures . Wang et al., 2020
588
Library Title Platform Total Base VCF File
SRR12280777 RNA-Seq of Populus tomentosa: 40 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_40 degrees Celsius_2 ILLUMINA 6490822106 bp
SRR12280778 RNA-Seq of Populus tomentosa: 40 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_40 degrees Celsius_1 ILLUMINA 6630346690 bp
SRR12280779 RNA-Seq of Populus tomentosa: 35 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_35 degrees Celsius_2 ILLUMINA 6592112802 bp
SRR12280780 RNA-Seq of Populus tomentosa: 35 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_35 degrees Celsius_1 ILLUMINA 6964468576 bp
SRR12280781 RNA-Seq of Populus tomentosa: 30 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_30 degrees Celsius_2 ILLUMINA 6639657960 bp
SRR12280782 RNA-Seq of Populus tomentosa: 30 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_30 degrees Celsius_1 ILLUMINA 6783099844 bp
SRR12280783 RNA-Seq of Populus tomentosa: 25 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_25 degrees Celsius_2 ILLUMINA 6717766678 bp
SRR12280784 RNA-Seq of Populus tomentosa: 25 degrees Celsius plant with leaf from China: Beijing, TC1521, TC1521_25 degrees Celsius_1 ILLUMINA 6683730502 bp
PRJNA722127 To characterize the xylem development at the molecular level, we performed transcriptomic analysis using total RNA from xylem of fourth stem section at three different months, 1, 2 and 3 month, named as WT-1M, WT-2M and WT-3M, respectively. Zhang et al., 2021
589
Library Title Platform Total Base VCF File
SRR14291730 RNA-Seq of Populus tomentosa: 3 years seedling with xylem of stem from China:Beijing, WT-3M3 BGISEQ 8388206600 bp
SRR14291731 RNA-Seq of Populus tomentosa: 3 years seedling with xylem of stem from China:Beijing, WT-3M2 BGISEQ 8496431600 bp
SRR14291732 RNA-Seq of Populus tomentosa: 3 years seedling with xylem of stem from China:Beijing, WT-3M1 BGISEQ 8195051600 bp
SRR14291733 RNA-Seq of Populus tomentosa: 2 years seedling with xylem of stem from China:Beijing, WT-2M3 BGISEQ 8393573000 bp
SRR14291734 RNA-Seq of Populus tomentosa: 2 years seedling with xylem of stem from China:Beijing, WT-2M2 BGISEQ 8446076400 bp
SRR14291735 RNA-Seq of Populus tomentosa: 2 years seedling with xylem of stem from China:Beijing, WT-2M1 BGISEQ 8418540400 bp
SRR14291736 RNA-Seq of Populus tomentosa: 1 years seedling with xylem of stem from China:Beijing, WT-1M3 BGISEQ 8335512200 bp
SRR14291737 RNA-Seq of Populus tomentosa: 1 years seedling with xylem of stem from China:Beijing, WT-1M2 BGISEQ 8541326200 bp
SRR14291738 RNA-Seq of Populus tomentosa: 1 years seedling with xylem of stem from China:Beijing, WT-1M1 BGISEQ 8227255000 bp
PRJNA750625 The RNA-seq data of leaves of Populus tomentousa untreated or treated with methyl viologen (MV). -
590
Library Title Platform Total Base VCF File
SRR15312642 RNA-Seq of Populus tomentosa: 2 months antisense transgenic plant untreated plant with leaf from China: Beijing, antiye_2 ILLUMINA 13260078300 bp
SRR15312643 RNA-Seq of Populus tomentosa: 2 months antisense transgenic plant untreated plant with leaf from China: Beijing, antiye_3 ILLUMINA 14107588500 bp
SRR15312644 RNA-Seq of Populus tomentosa: 2 months wild type treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, WT_M_1 ILLUMINA 14787717900 bp
SRR15312645 RNA-Seq of Populus tomentosa: 2 months wild type untreated plant with leaf from China: Beijing, WTye_1 ILLUMINA 12735046500 bp
SRR15312646 RNA-Seq of Populus tomentosa: 2 months wild type treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, WT_M_2 ILLUMINA 13445269200 bp
SRR15312647 RNA-Seq of Populus tomentosa: 2 months wild type treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, WT_M_3 ILLUMINA 12514418100 bp
SRR15312648 RNA-Seq of Populus tomentosa: 2 months overexpression transgenic plant treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, OX_M_1 ILLUMINA 11962212300 bp
SRR15312649 RNA-Seq of Populus tomentosa: 2 months overexpression transgenic plant treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, OX_M_2 ILLUMINA 12579366000 bp
SRR15312650 RNA-Seq of Populus tomentosa: 2 months overexpression transgenic plant treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, OX_M_3 ILLUMINA 12855591900 bp
SRR15312651 RNA-Seq of Populus tomentosa: 2 months wild type untreated plant with leaf from China: Beijing, WTye_2 ILLUMINA 13321236900 bp
SRR15312652 RNA-Seq of Populus tomentosa: 2 months antisense transgenic plant treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, anti_M_1 ILLUMINA 14801605800 bp
SRR15312653 RNA-Seq of Populus tomentosa: 2 months antisense transgenic plant treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, anti_M_2 ILLUMINA 11013683400 bp
SRR15312654 RNA-Seq of Populus tomentosa: 2 months antisense transgenic plant treated with 100 µmol L-1 MV for 5 h plant with leaf from China: Beijing, anti_M_3 ILLUMINA 12679904700 bp
SRR15312655 RNA-Seq of Populus tomentosa: 2 months wild type untreated plant with leaf from China: Beijing, WTye_3 ILLUMINA 14165157300 bp
SRR15312656 RNA-Seq of Populus tomentosa: 2 months overexpression transgenic plant untreated plant with leaf from China: Beijing, OXye_1 12921499500 bp
SRR15312657 RNA-Seq of Populus tomentosa: 2 months overexpression transgenic plant untreated plant with leaf from China: Beijing, OXye_2 12119397300 bp
SRR15312658 RNA-Seq of Populus tomentosa: 2 months overexpression transgenic plant untreated plant with leaf from China: Beijing, OXye_3 ILLUMINA 11994701100 bp
SRR15312659 RNA-Seq of Populus tomentosa: 2 months antisense transgenic plant untreated plant with leaf from China: Beijing, antiye_1 ILLUMINA 12910540200 bp
PRJNA806357 Cambium tissue of Populus tomentosa during autumn leaf senescence -
591
Library Title Platform Total Base VCF File
SRR21991993 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 06 repear 1 ILLUMINA 7275737100 bp
SRR21991994 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 02 repear 3 ILLUMINA 7442959800 bp
SRR21991995 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 02 repear 2 ILLUMINA 7708919100 bp
SRR21991996 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 02 repear 1 ILLUMINA 7648022700 bp
SRR21991997 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Sept. 29 repear 3 ILLUMINA 7731401100 bp
SRR21991998 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 17 repear 3 ILLUMINA 6709233000 bp
SRR21991999 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 17 repear 2 ILLUMINA 7365107400 bp
SRR21992000 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 17 repear 1 ILLUMINA 8394520500 bp
SRR21992001 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 13 repear 3 ILLUMINA 7479102300 bp
SRR21992002 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 13 repear 2 ILLUMINA 7207246800 bp
SRR21992003 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 13 repear 1 ILLUMINA 6863214300 bp
SRR21992004 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 10 repear 3 ILLUMINA 7756939500 bp
SRR21992005 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 10 repear 2 ILLUMINA 6775923600 bp
SRR21992006 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Sept. 29 repear 2 ILLUMINA 7433593500 bp
SRR21992007 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 10 repear 1 ILLUMINA 5967941400 bp
SRR21992008 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 06 repear 3 ILLUMINA 11291127900 bp
SRR21992009 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 06 repear 2 ILLUMINA 8572788600 bp
SRR21992010 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 06 repear 1 ILLUMINA 8924660100 bp
SRR21992011 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 03 repear 3 ILLUMINA 7247751600 bp
SRR21992012 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 03 repear 2 ILLUMINA 8150182200 bp
SRR21992013 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Nov. 03 repear 1 ILLUMINA 7346915700 bp
SRR21992014 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 30 repear 3 ILLUMINA 7262846400 bp
SRR21992015 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 30 repear 2 ILLUMINA 9519678000 bp
SRR21992016 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 30 repear 1 ILLUMINA 7365577200 bp
SRR21992017 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Sept. 29 repear 1 ILLUMINA 7137756600 bp
SRR21992018 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 27 repear 3 ILLUMINA 9268875000 bp
SRR21992019 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 27 repear 2 ILLUMINA 7697194200 bp
SRR21992020 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 27 repear 1 ILLUMINA 6208872600 bp
SRR21992021 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 23 repear 3 ILLUMINA 8484829200 bp
SRR21992022 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 23 repear 2 ILLUMINA 7707359700 bp
SRR21992023 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 23 repear 1 ILLUMINA 9292014600 bp
SRR21992024 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 20 repear 3 ILLUMINA 9629513400 bp
SRR21992025 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 20 repear 2 ILLUMINA 8314460700 bp
SRR21992026 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 20 repear 1 ILLUMINA 6470339400 bp
SRR21992027 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 16 repear 3 ILLUMINA 8151765300 bp
SRR21992028 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Sept. 22 repear 3 ILLUMINA 6422159100 bp
SRR21992029 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 16 repear 2 ILLUMINA 7722162900 bp
SRR21992030 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 16 repear 1 ILLUMINA 8982622500 bp
SRR21992031 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 13 repear 3 ILLUMINA 8021432400 bp
SRR21992032 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 13 repear 2 ILLUMINA 7903723500 bp
SRR21992033 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 13 repear 1 ILLUMINA 7944015300 bp
SRR21992034 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 09 repear 3 ILLUMINA 6574539300 bp
SRR21992035 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 09 repear 2 ILLUMINA 8970213600 bp
SRR21992036 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 09 repear 1 ILLUMINA 7870749300 bp
SRR21992037 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 06 repear 3 ILLUMINA 6601149600 bp
SRR21992038 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Oct. 06 repear 2 ILLUMINA 6721806600 bp
SRR21992039 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Sept. 22 repear 2 ILLUMINA 7113646200 bp
SRR21992040 RNA-Seq of Populus tomentosa: 35 years plant with cambium from China: Beijing, Cambium collected at Sept. 22 repear 1 ILLUMINA 7303482000 bp
PRJNA925667 Transcriptome data of WT and PtoERF15-OE poplars -
592
Library Title Platform Total Base VCF File
SRR25703624 RNA-Seq of Populus tomentosa: juvenile stage stage plant with stem from China:Chongqing, clone 741, ABC8 DNBSEQ 11505354600 bp
SRR25703625 RNA-Seq of Populus tomentosa: juvenile stage stage plant with stem from China:Chongqing, clone 741, ABC7 DNBSEQ 7596155700 bp
SRR25703626 RNA-Seq of Populus tomentosa: juvenile stage stage plant with stem from China:Chongqing, clone 741, ABC6 DNBSEQ 12039399600 bp
SRR25703627 RNA-Seq of Populus tomentosa: juvenile stage stage plant with stem from China:Chongqing, clone 741, ABC5 DNBSEQ 12943166100 bp

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