Project

Bioproject Description Publication GVCF File Library Num.
PRJNA434010 This research focuses on enhancing commercial oil palm varieties by leveraging genetic variation from wild populations, particularly E. oleifera, to improve traits such as disease resistance and oil quality Ithnin et al., 2021
Library Title Platform Total Base VCF File
SRR14510773 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0902_0211_1998, PAN_0902_0211_1998 ILLUMINA 2574406117 bp
SRR14510774 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0902_0211_0747, PAN_0902_0211_0747 ILLUMINA 1327430347 bp
SRR14510775 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0802_0211_1245, PAN_0802_0211_1245 ILLUMINA 2459760198 bp
SRR14510776 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0802_0211_0439, PAN_0802_0211_0439 ILLUMINA 2451544771 bp
SRR14510777 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0801_0211_1170, PAN_0801_0211_1170 ILLUMINA 1532480244 bp
SRR14510778 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0801_0211_0024, PAN_0801_0211_0024 ILLUMINA 1134701100 bp
SRR14510779 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0702_0211_1858, PAN_0702_0211_1858 ILLUMINA 1828819858 bp
SRR14510780 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0701_0211_2461, PAN_0701_0211_2461 ILLUMINA 1582964730 bp
SRR14510781 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0701_0211_1558, PAN_0701_0211_1558 ILLUMINA 2026494066 bp
SRR14510782 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0602_0211_1596, PAN_0602_0211_1596 ILLUMINA 2113278322 bp
SRR14510783 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0864, COL_0211_0864 ILLUMINA 302869329 bp
SRR14510784 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0602_0211_1083, PAN_0602_0211_1083 ILLUMINA 1816761150 bp
SRR14510785 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0601_0211_2117, PAN_0601_0211_2117 ILLUMINA 1680431180 bp
SRR14510786 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0504_0211_1751, PAN_0504_0211_1751 ILLUMINA 2427657067 bp
SRR14510787 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0402_0211_1744, PAN_0402_0211_1744 ILLUMINA 1500084113 bp
SRR14510788 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0402_0211_1696, PAN_0402_0211_1696 ILLUMINA 1643127299 bp
SRR14510789 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0401_0211_1718, PAN_0401_0211_1718 ILLUMINA 1759541766 bp
SRR14510790 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0302_0211_1430, PAN_0302_0211_1430 ILLUMINA 3080134079 bp
SRR14510791 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0302_0211_0787, PAN_0302_0211_0787 ILLUMINA 2538665684 bp
SRR14510792 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0301_0211_1323, PAN_0301_0211_1323 ILLUMINA 1761293613 bp
SRR14510793 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_2075, PAN_0211_2075 ILLUMINA 341166945 bp
SRR14510794 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0864, COL_0211_0864 ILLUMINA 650788160 bp
SRR14510795 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_2075, PAN_0211_2075 ILLUMINA 606365844 bp
SRR14510796 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1486, PAN_0211_1486 ILLUMINA 624744092 bp
SRR14510797 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1486, PAN_0211_1486 ILLUMINA 2354411755 bp
SRR14510798 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1311, PAN_0211_1311 ILLUMINA 341746958 bp
SRR14510799 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1311, PAN_0211_1311 ILLUMINA 1327090760 bp
SRR14510800 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1200, PAN_0211_1200 ILLUMINA 563983973 bp
SRR14510801 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1200, PAN_0211_1200 ILLUMINA 762681051 bp
SRR14510802 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1144, PAN_0211_1144 ILLUMINA 303530339 bp
SRR14510803 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1144, PAN_0211_1144 ILLUMINA 1197726279 bp
SRR14510804 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1087, PAN_0211_1087 ILLUMINA 287925848 bp
SRR14510805 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0266, COL_0211_0266 ILLUMINA 320686408 bp
SRR14510806 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_1087, PAN_0211_1087 ILLUMINA 459581341 bp
SRR14510807 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0775, PAN_0211_0775 ILLUMINA 611624307 bp
SRR14510808 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0775, PAN_0211_0775 ILLUMINA 701785103 bp
SRR14510809 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0691, PAN_0211_0691 ILLUMINA 306270671 bp
SRR14510810 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0691, PAN_0211_0691 ILLUMINA 394264609 bp
SRR14510811 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0301, PAN_0211_0301 ILLUMINA 229570103 bp
SRR14510812 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0301, PAN_0211_0301 ILLUMINA 353107192 bp
SRR14510813 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0300, PAN_0211_0300 ILLUMINA 178987676 bp
SRR14510814 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0300, PAN_0211_0300 ILLUMINA 613543758 bp
SRR14510815 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0243, PAN_0211_0243 ILLUMINA 355771808 bp
SRR14510816 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0266, COL_0211_0266 ILLUMINA 696503192 bp
SRR14510817 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0243, PAN_0211_0243 ILLUMINA 1813154613 bp
SRR14510818 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0233, PAN_0211_0233 ILLUMINA 365763832 bp
SRR14510819 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0233, PAN_0211_0233 ILLUMINA 639863069 bp
SRR14510820 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0151, PAN_0211_0151 ILLUMINA 1588884795 bp
SRR14510821 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0143, PAN_0211_0143 ILLUMINA 401639917 bp
SRR14510822 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0143, PAN_0211_0143 ILLUMINA 733928961 bp
SRR14510823 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0030, PAN_0211_0030 ILLUMINA 350167587 bp
SRR14510824 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0030, PAN_0211_0030 ILLUMINA 592771523 bp
SRR14510825 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0008, PAN_0211_0008 ILLUMINA 122390989 bp
SRR14510826 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0211_0008, PAN_0211_0008 ILLUMINA 213636555 bp
SRR14510827 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0209, COL_0211_0209 ILLUMINA 278927866 bp
SRR14510828 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0202_0211_1832, PAN_0202_0211_1832 ILLUMINA 1429231439 bp
SRR14510829 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0202_0211_1618, PAN_0202_0211_1618 ILLUMINA 1991358092 bp
SRR14510830 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0202_0211_1018, PAN_0202_0211_1018 ILLUMINA 2402952186 bp
SRR14510831 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0202_0211_0501, PAN_0202_0211_0501 ILLUMINA 2009703408 bp
SRR14510832 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_0101_0211_0113, PAN_0101_0211_0113 ILLUMINA 1595963675 bp
SRR14510833 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0302_0211_1148, HND_0302_0211_1148 ILLUMINA 1771817880 bp
SRR14510834 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0211_1533, HND_0211_1533 ILLUMINA 139993007 bp
SRR14510835 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0211_1533, HND_0211_1533 ILLUMINA 235893714 bp
SRR14510836 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0205_0211_1996, HND_0205_0211_1996 ILLUMINA 2043550768 bp
SRR14510837 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0204_0211_1424, HND_0204_0211_1424 ILLUMINA 1831492311 bp
SRR14510838 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0209, COL_0211_0209 ILLUMINA 1128912592 bp
SRR14510839 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0202_0211_0533, HND_0202_0211_0533 ILLUMINA 1940475419 bp
SRR14510840 WGS of Elaeis oleifera: adult stage plant with leaf from Honduras, HND_0201_0211_1332, HND_0201_0211_1332 ILLUMINA 2167327739 bp
SRR14510841 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_1432, CRI_0211_1432 ILLUMINA 413952924 bp
SRR14510842 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_1432, CRI_0211_1432 ILLUMINA 1955668934 bp
SRR14510843 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_1088, CRI_0211_1088 ILLUMINA 226984716 bp
SRR14510844 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_1088, CRI_0211_1088 ILLUMINA 1030428553 bp
SRR14510845 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0730, CRI_0211_0730 ILLUMINA 516384071 bp
SRR14510846 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0730, CRI_0211_0730 ILLUMINA 2050483441 bp
SRR14510847 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0727, CRI_0211_0727 ILLUMINA 324535295 bp
SRR14510848 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0727, CRI_0211_0727 ILLUMINA 1277744872 bp
SRR14510849 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0053, COL_0211_0053 ILLUMINA 320036969 bp
SRR14510850 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0519, CRI_0211_0519 ILLUMINA 371114821 bp
SRR14510851 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0519, CRI_0211_0519 ILLUMINA 498313597 bp
SRR14510852 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0473, CRI_0211_0473 ILLUMINA 247573382 bp
SRR14510853 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0473, CRI_0211_0473 ILLUMINA 955058698 bp
SRR14510854 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0287, CRI_0211_0287 ILLUMINA 342882113 bp
SRR14510855 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0287, CRI_0211_0287 ILLUMINA 469569125 bp
SRR14510856 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0234, CRI_0211_0234 ILLUMINA 330360296 bp
SRR14510857 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0234, CRI_0211_0234 ILLUMINA 1292592647 bp
SRR14510858 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0187, CRI_0211_0187 ILLUMINA 226748242 bp
SRR14510859 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0187, CRI_0211_0187 ILLUMINA 400376589 bp
SRR14510860 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0053, COL_0211_0053 ILLUMINA 577871301 bp
SRR14510861 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0015, CRI_0211_0015 ILLUMINA 443323181 bp
SRR14510862 WGS of Elaeis oleifera: adult stage plant with leaf from Costa Rica, CRI_0211_0015, CRI_0211_0015 ILLUMINA 1809611071 bp
SRR14510863 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_2025, COL_0211_2025 ILLUMINA 270328751 bp
SRR14510864 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_2025, COL_0211_2025 ILLUMINA 434451610 bp
SRR14510865 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_1910, COL_0211_1910 ILLUMINA 245981505 bp
SRR14510866 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_1910, COL_0211_1910 ILLUMINA 454456478 bp
SRR14510867 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_1571, COL_0211_1571 ILLUMINA 298426730 bp
SRR14510868 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_1571, COL_0211_1571 ILLUMINA 588143002 bp
SRR14510869 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_1193, COL_0211_1193 ILLUMINA 341036605 bp
SRR14510870 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1302_0211_1472, PAN_1302_0211_1472 ILLUMINA 2293788883 bp
SRR14510871 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1301_0211_1570, PAN_1301_0211_1570 ILLUMINA 2552470086 bp
SRR14510872 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1301_0211_0494, PAN_1301_0211_0494 ILLUMINA 1683459042 bp
SRR14510873 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1201_0211_0274, PAN_1201_0211_0274 ILLUMINA 2426232501 bp
SRR14510874 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1102_0211_0269, PAN_1102_0211_0269 ILLUMINA 2809345823 bp
SRR14510875 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1102_0211_0269, PAN_1102_0211_0269 ILLUMINA 1690521221 bp
SRR14510876 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1102_0211_0123, PAN_1102_0211_0123 ILLUMINA 1865772432 bp
SRR14510877 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1002_0211_1697, PAN_1002_0211_1697 ILLUMINA 1699215410 bp
SRR14510878 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1002_0211_0267, PAN_1002_0211_0267 ILLUMINA 1903346459 bp
SRR14510879 WGS of Elaeis oleifera: adult stage plant with leaf from Panama, PAN_1001_0211_1574, PAN_1001_0211_1574 ILLUMINA 1892577537 bp
SRR14510880 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_1193, COL_0211_1193 ILLUMINA 584220611 bp
SRR14510881 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0025, COL_0211_0025 ILLUMINA 513297939 bp
SRR14510882 WGS of Elaeis oleifera: adult stage plant with leaf from Colombia, COL_0211_0025, COL_0211_0025 ILLUMINA 1076057443 bp
PRJNA319554 This project aims to sequence the genome of an Elaeis oleifera plant from the Amazon, using Next-Generation Sequencing to benefit Embrapa's Oil Palm Breeding Program. Filho et al., 2017
Library Title Platform Total Base VCF File
SRR3545584 WGS of Elaeis oleifera: adult stage plant with Leaf, ElaeisOleifera_Manicore_A41-06-04 ILLUMINA 16423431200 bp
SRR3545585 WGS of Elaeis oleifera: adult stage plant with Leaf, ElaeisOleifera_Manicore_A41-06-04 ILLUMINA 1.37784E+11 bp
SRR3545586 WGS of Elaeis oleifera: adult stage plant with Leaf, ElaeisOleifera_Manicore_A41-06-04 ILLUMINA 33799997200 bp
SRR3545588 WGS of Elaeis oleifera: adult stage plant with Leaf, ElaeisOleifera_Manicore_A41-06-04 ILLUMINA 6816314800 bp
SRR3545589 WGS of Elaeis oleifera: adult stage plant with Leaf, ElaeisOleifera_Manicore_A41-06-04 ILLUMINA 5064840400 bp