Project

Bioproject Description Publication GVCF File Library Num.
PRJNA526975 Researchers provide a draft de novo genome of pistachio as well as large-scale genome resequencing. Zeng et al., 2019
Library Title Platform Total Base VCF File
SRR8772685 WGS of Pistacia vera: leaf from Iran, Khanjari, N32 ILLUMINA 5060086500 bp
SRR8772686 WGS of Pistacia vera: leaf from Iran, Italiaei, N33 ILLUMINA 5198666100 bp
SRR8772687 WGS of Pistacia vera: leaf from Iran, Mohseni, N25 ILLUMINA 5138465100 bp
SRR8772688 WGS of Pistacia vera: leaf from Iran, Ebrahimi, N26 ILLUMINA 5070127200 bp
SRR8772689 WGS of Pistacia vera: leaf from Iran, Akbari, N22 ILLUMINA 5116246800 bp
SRR8772690 WGS of Pistacia vera: leaf from Iran, Ahmad Aqaei, N23 ILLUMINA 5176268400 bp
SRR8772691 WGS of Pistacia vera: leaf from Iran, Jandaqi, N29 ILLUMINA 5185721700 bp
SRR8772692 WGS of Pistacia vera: leaf from Iran, Qazvini, N31 ILLUMINA 5025319500 bp
SRR8772693 WGS of Pistacia vera: leaf from Iran, Shahpesand, N27 ILLUMINA 5222022600 bp
SRR8772694 WGS of Pistacia vera: leaf from Iran, Fandoqi Riz, N28 ILLUMINA 5148141300 bp
SRR8772705 WGS of Pistacia vera: leaf from Iran, Khanjari damghan, N10 ILLUMINA 5092448400 bp
SRR8772706 WGS of Pistacia vera: leaf from Iran, Mikegi, N221 ILLUMINA 5134784100 bp
SRR8772707 WGS of Pistacia vera: leaf from Iran, Joon, N226 ILLUMINA 5063361000 bp
SRR8772708 WGS of Pistacia vera: leaf from Iran, Hasan abbasi, N227 ILLUMINA 5127464400 bp
SRR8772709 WGS of Pistacia vera: leaf from Iran, Badami Zarand, N9 ILLUMINA 5175654600 bp
SRR8772710 WGS of Pistacia vera: leaf from Iran, Accession 108, N108 ILLUMINA 5227446300 bp
SRR8772711 WGS of Pistacia vera: leaf from Iran, Accession 107, N107 ILLUMINA 5087323500 bp
SRR8772712 WGS of Pistacia vera: leaf from Iran, Accession 106, N106 ILLUMINA 5009103000 bp
SRR8772713 WGS of Pistacia vera: leaf from Iran, Accession 105, N105 ILLUMINA 5007924600 bp
SRR8772714 WGS of Pistacia vera: leaf from Iran, Accession 103, N103 ILLUMINA 5001065100 bp
SRR8772715 WGS of Pistacia vera: leaf from Iran, Accession 102, N102 ILLUMINA 5028224400 bp
SRR8772716 WGS of Pistacia vera: leaf from Iran, Accession 99, N99 ILLUMINA 5048295900 bp
SRR8772717 WGS of Pistacia vera: leaf from Iran, Accession 98, N98 ILLUMINA 5134975800 bp
SRR8772718 WGS of Pistacia vera: leaf from Iran, Accession 97, N97 ILLUMINA 5195443500 bp
SRR8772719 WGS of Pistacia vera: leaf from Iran, Accession 96, N96 ILLUMINA 5217086700 bp
SRR8772720 WGS of Pistacia vera: leaf from Iran, Ketani qermez, N229 ILLUMINA 5223555000 bp
SRR8772721 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 13465569900 bp
SRR8772722 WGS of Pistacia vera: leaf from Iran, Sabz Pesteh Nooq, N7 ILLUMINA 5089660200 bp
SRR8772723 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 6524229872 bp
SRR8772724 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 7488979560 bp
SRR8772725 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 58800835152 bp
SRR8772726 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 25806899036 bp
SRR8772727 WGS of Pistacia vera: leaf from Iran, Ohadi, N1 ILLUMINA 5121618300 bp
SRR8772728 WGS of Pistacia vera: leaf from Iran, Seifadini, N4 ILLUMINA 5206468800 bp
SRR8772730 WGS of Pistacia vera: leaf from Iran, Fandoqi Zoodras, N6 ILLUMINA 5057164500 bp
SRR8772731 WGS of Pistacia vera: leaf from Iran, Accession 94, N94 ILLUMINA 5234258700 bp
SRR8772732 WGS of Pistacia vera: leaf from Iran, Accession 95, N95 ILLUMINA 5161320000 bp
SRR8772733 WGS of Pistacia vera: leaf from Iran, Badami Nishkalaghi, N5 ILLUMINA 5221404300 bp
SRR8772734 WGS of Pistacia vera: leaf from Iran, Momtaz, N45 ILLUMINA 5113520100 bp
SRR8772735 WGS of Pistacia vera: leaf from Iran, Badami Zarand 67, N67 ILLUMINA 5052968400 bp
SRR8772736 WGS of Pistacia vera: leaf from Iran, Badami Zarand 68, N68 ILLUMINA 5079527100 bp
SRR8772737 WGS of Pistacia vera: leaf from Iran, Badami Zarand 69, N69 ILLUMINA 5106116400 bp
SRR8772738 WGS of Pistacia vera: leaf from Iran, Badami Zarand 70, N70 ILLUMINA 5084959200 bp
SRR8772739 WGS of Pistacia vera: leaf from Iran, Badami Zarand 71, N71 ILLUMINA 5193737100 bp
SRR8772740 WGS of Pistacia vera: leaf from Iran, Accession 92, N92 ILLUMINA 5107173000 bp
SRR8772741 WGS of Pistacia vera: leaf from Iran, Accession 93, N93 ILLUMINA 5047500000 bp
SRR8772742 WGS of Pistacia vera: leaf from Iran, Baluch, N211 ILLUMINA 5092445400 bp
SRR8772743 WGS of Pistacia vera: leaf from Iran, Hajabdolahi, N210 ILLUMINA 5210162400 bp
SRR8772744 WGS of Pistacia vera: leaf from Iran, Khardar, N213 ILLUMINA 5230589700 bp
SRR8772745 WGS of Pistacia vera: leaf from Iran, Kolombei, N212 ILLUMINA 5047142700 bp
SRR8772746 WGS of Pistacia vera: leaf from Iran, Khosheh Angori, N207 ILLUMINA 5104750500 bp
SRR8772747 WGS of Pistacia vera: leaf from Iran, Accession 121, N121 ILLUMINA 5212434300 bp
SRR8772748 WGS of Pistacia vera: leaf from Iran, Gori, N209 ILLUMINA 5048182500 bp
SRR8772749 WGS of Pistacia vera: leaf from Iran, Sahraei, N208 ILLUMINA 4995885000 bp
SRR8772750 WGS of Pistacia vera: leaf from Iran, Tirmahi, N215 ILLUMINA 5082087300 bp
SRR8772751 WGS of Pistacia vera: leaf from Iran, Qermez kochek, N214 ILLUMINA 5117410200 bp
SRR8772760 WGS of Pistacia vera: leaf from Iran, Sarakhs 134, N134 ILLUMINA 5117222700 bp
SRR8772761 WGS of Pistacia vera: leaf from Iran, Sarakhs 135, N135 ILLUMINA 5241042300 bp
SRR8772762 WGS of Pistacia vera: leaf from Iran, Accession 116, N116 ILLUMINA 5205989700 bp
SRR8772763 WGS of Pistacia vera: leaf from Iran, Accession 118, N118 ILLUMINA 5107737000 bp
SRR8772764 WGS of Pistacia vera: leaf from Iran, Accession 114, N114 ILLUMINA 5190083100 bp
SRR8772765 WGS of Pistacia vera: leaf from Iran, Kaleh Ghochi, N2 ILLUMINA 5238330000 bp
SRR8772766 WGS of Pistacia vera: leaf from Iran, Accession 112, N112 ILLUMINA 5140842300 bp
SRR8772767 WGS of Pistacia vera: leaf from Iran, Accession 113, N113 ILLUMINA 5176512300 bp
SRR8772768 WGS of Pistacia vera: leaf from Iran, Accession 110, N110 ILLUMINA 5073272400 bp
SRR8772769 WGS of Pistacia vera: leaf from Iran, Accession 111, N111 ILLUMINA 5104681800 bp
SRR8772770 WGS of Pistacia vera: leaf from Iran, Accession 119, N119 ILLUMINA 5133429000 bp
SRR8772771 WGS of Pistacia vera: leaf from Iran, Accession 120, N120 ILLUMINA 5189481300 bp
SRR8772772 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 13668997142 bp
SRR8772773 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 7396871986 bp
SRR8772774 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 5679664688 bp
SRR8772775 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 6052509018 bp
SRR8772776 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 4715020246 bp
SRR8772777 WGS of Pistacia vera: leaf from China, Batoury, de novo ILLUMINA 4335178194 bp
SRR8772782 WGS of Pistacia vera: leaf from Iran, Badami Ravar, N14 ILLUMINA 5009050800 bp
SRR8772783 WGS of Pistacia vera: leaf from Iran, Moosi Abadi, N13 ILLUMINA 5080076100 bp
SRR8772784 WGS of Pistacia vera: leaf from Iran, Harati, N12 ILLUMINA 5072271900 bp
SRR8772785 WGS of Pistacia vera: leaf from Iran, Rezaei Zoodras, N11 ILLUMINA 5035113300 bp
SRR8772786 WGS of Pistacia vera: leaf from Iran, Ravar 1, N18 ILLUMINA 5059680300 bp
SRR8772787 WGS of Pistacia vera: leaf from Iran, Biayazi, N17 ILLUMINA 5185740600 bp
SRR8772788 WGS of Pistacia vera: leaf from Iran, Sirizi, N16 ILLUMINA 5097910800 bp
SRR8772789 WGS of Pistacia vera: leaf from Iran, Hasani, N15 ILLUMINA 5003517300 bp
SRR8772790 WGS of Pistacia vera: leaf from Iran, Ravar 3, N20 ILLUMINA 5138416500 bp
SRR8772791 WGS of Pistacia vera: leaf from Iran, Ravar 2, N19 ILLUMINA 5230165800 bp
SRR8772792 WGS of Pistacia vera: leaf from Iran, Sarakhs 65, N65 ILLUMINA 5043062700 bp
SRR8772793 WGS of Pistacia vera: leaf from Iran, Sarakhs 66, N66 ILLUMINA 5096815800 bp
SRR8772797 WGS of Pistacia vera: leaf from Iran, Fandoqi Ghafoori, N3 ILLUMINA 5091683400 bp
SRR8772802 WGS of Pistacia vera: leaf from Iran, Sarakhs 131, N131 ILLUMINA 5074498500 bp
SRR8772803 WGS of Pistacia vera: leaf from Iran, Sarakhs 130, N130 ILLUMINA 5081780400 bp
SRR8772804 WGS of Pistacia vera: leaf from Iran, Sarakhs 129, N129 ILLUMINA 5127528000 bp
SRR8772805 WGS of Pistacia vera: leaf from Iran, Sarakhs 127, N127 ILLUMINA 5222448600 bp
SRR8772806 WGS of Pistacia vera: leaf from Iran, Sarakhs 126, N126 ILLUMINA 5104331700 bp
SRR8772807 WGS of Pistacia vera: leaf from Iran, Sarakhs 125, N125 ILLUMINA 5116186200 bp
SRR8772808 WGS of Pistacia vera: leaf from Iran, Sarakhs 124, N124 ILLUMINA 5222961900 bp
SRR8772809 WGS of Pistacia vera: leaf from Iran, Sarakhs 123, N123 ILLUMINA 5162204400 bp
SRR8772810 WGS of Pistacia vera: leaf from Iran, Sarakhs 133, N133 ILLUMINA 5019240600 bp
SRR8772811 WGS of Pistacia vera: leaf from Iran, Sarakhs 132, N132 ILLUMINA 5099840700 bp
SRR8772815 WGS of Pistacia vera: leaf from Iran, Shishei1, N230 ILLUMINA 5135432700 bp
SRR8772816 WGS of Pistacia vera: leaf from Iran, Accession 115, N115 ILLUMINA 5071657500 bp
SRR8772817 WGS of Pistacia vera: leaf from Iran, Dahan bast, N228 ILLUMINA 5207241300 bp
SRR8772822 WGS of Pistacia vera: leaf from Iran, Lahijani, N44 ILLUMINA 5247819300 bp
SRR8772823 WGS of Pistacia vera: leaf from Iran, Poost Khormaei, N43 ILLUMINA 5055902700 bp
SRR8772824 WGS of Pistacia vera: leaf from Iran, Gholamrezaei, N8 ILLUMINA 5161551900 bp
SRR8772825 WGS of Pistacia vera: leaf from Iran, Lak Sirizi, N35 ILLUMINA 5128949400 bp
SRR8772826 WGS of Pistacia vera: leaf from Iran, Momtaz Tajabadi, N34 ILLUMINA 5181077700 bp
SRR8772827 WGS of Pistacia vera: leaf from Iran, Sefid Pesteh Nooq, N38 ILLUMINA 5112123000 bp
SRR8772828 WGS of Pistacia vera: leaf from Iran, Shasti, N37 ILLUMINA 5205535500 bp
SRR8772829 WGS of Pistacia vera: leaf from Iran, Ghafoori, N40 ILLUMINA 5248592700 bp
SRR8772830 WGS of Pistacia vera: leaf from Iran, Amiri, N39 ILLUMINA 5145299100 bp
SRR8772831 WGS of Pistacia vera: leaf from Iran, Javad Aqaei, N42 ILLUMINA 5235832500 bp
SRR8772832 WGS of Pistacia vera: leaf from Iran, Vahedi, N41 ILLUMINA 5130295800 bp
SRR8772843 WGS of Pistacia vera: leaf from Iran, Khanjeri Ardekan, N222 ILLUMINA 5129375400 bp
SRR8772844 WGS of Pistacia vera: leaf from Iran, Ketani sabz, N223 ILLUMINA 5187845400 bp
SRR8772845 WGS of Pistacia vera: leaf from Iran, Gorkhari, N224 ILLUMINA 5091196800 bp
SRR8772846 WGS of Pistacia vera: leaf from Iran, Shahbarg, N225 ILLUMINA 5091817800 bp
SRR8772847 WGS of Pistacia vera: leaf from Iran, Shishei 2, N216 ILLUMINA 5140193100 bp
SRR8772848 WGS of Pistacia vera: leaf from Iran, Sarkhoshk, N219 ILLUMINA 5187721200 bp
SRR8772849 WGS of Pistacia vera: leaf from Iran, Pakootah, N220 ILLUMINA 5045586600 bp
SRR8797221 WGS of Pistacia vera: leaf from China, Batoury, sample for pacbio PACBIO_SMRT 12125245498 bp
SRR8797222 WGS of Pistacia vera: leaf from China, Batoury, sample for pacbio PACBIO_SMRT 12145353185 bp
SRR8797223 WGS of Pistacia vera: leaf from China, Batoury, sample for pacbio PACBIO_SMRT 11287268464 bp
SRR8797224 WGS of Pistacia vera: leaf from China, Batoury, sample for pacbio PACBIO_SMRT 12265303382 bp
SRR8797225 WGS of Pistacia vera: leaf from China, Batoury, sample for pacbio PACBIO_SMRT 11050811328 bp
PRJNA350690 This study aimed to start denovo whole genome sequencing and construction of high density genetic linkage maps in pistachio -
Library Title Platform Total Base VCF File
SRR4453367 WGS of Pistacia vera: leaf, Siirt, SZAXPI032801 ILLUMINA 18719394000 bp
SRR4453368 WGS of Pistacia vera: leaf, Siirt, SZAIPI027576 ILLUMINA 8054205300 bp