Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA747875 The genome of cultivar 'Feizixiao' was assembled into 15 pseudo-chromosomes, totaling ~470 Mb. High heterozygosity (2.27%) resulted in two complete haplotypic assemblies. Hu et al., 2022
98
Library Title Platform Total Base VCF File
SRR15219642 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Yuanyang, YNYL06, YNYL06 PE library ILLUMINA 12563446297 bp
SRR15221451 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library PACBIO_SMRT 50468812467 bp
SRR15197819 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, Feizixiao 10X library IV ILLUMINA 11696812500 bp
SRR15197820 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, Feizixiao 10X library III ILLUMINA 10158196500 bp
SRR15197821 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, Feizixiao 10X library II ILLUMINA 9074976600 bp
SRR15197822 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, Feizixiao 10X library I ILLUMINA 8560218000 bp
SRR15214164 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, HHDHL, HHDHL PE library ILLUMINA 7066827451 bp
SRR15214172 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAEDUAAPE_20k ILLUMINA 3163500480 bp
SRR15214173 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADTAAPE_10k_2 ILLUMINA 5201326080 bp
SRR15214174 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADTAAPE_10k_1 ILLUMINA 4386741440 bp
SRR15214175 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, GW, GW PE library ILLUMINA 8657691117 bp
SRR15214176 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADLAAPE_5k_3 ILLUMINA 3245860640 bp
SRR15214177 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADLAAPE_5k_2 ILLUMINA 3241764160 bp
SRR15214178 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADLAAPE_5k_1 ILLUMINA 3109261600 bp
SRR15214179 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADWAAPE_2k_2 ILLUMINA 4802562400 bp
SRR15214180 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADWAAPE_2k_1 ILLUMINA 5395101280 bp
SRR15214181 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADMAAPE_800 ILLUMINA 10822703200 bp
SRR15214182 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LICulqDAADIABPE_500 ILLUMINA 13876897600 bp
SRR15214183 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LICulqDAADIAAPE_500 ILLUMINA 14349746400 bp
SRR15214184 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, LITccvDAADBAAPE_180 ILLUMINA 16724126600 bp
SRR15214185 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Bobai, GXYBB16Z, GXYBB16Z PE library ILLUMINA 2725847464 bp
SRR15214186 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan, YA1, YA1 PE library ILLUMINA 7456067089 bp
SRR15214187 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Bobai, GXYBB15Z, GXYBB15Z PE library ILLUMINA 3057591059 bp
SRR15214188 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Bobai, GXYBB15H, GXYBB15H PE library ILLUMINA 3044514018 bp
SRR15214189 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Bobai, GXJNYL, GXJNYL PE library ILLUMINA 6397377014 bp
SRR15214190 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from Viet Nam, YNYL8-1, YNYL8-1 PE library ILLUMINA 3510499204 bp
SRR15214191 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from Viet Nam, YNYL4-1, YNYL4-1 PE library ILLUMINA 3333833888 bp
SRR15214192 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from Viet Nam, YNYL3-1, YNYL3-1 PE library ILLUMINA 3127852385 bp
SRR15214193 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from Viet Nam, YNYL2-1, YNYL2-1 PE library ILLUMINA 2951125403 bp
SRR15214194 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from Viet Nam, YNYL1-1, YNYL1-1 PE library ILLUMINA 2946417121 bp
SRR15214195 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Haikou, HNYL-S11, HNYL-S11 PE library ILLUMINA 3342213266 bp
SRR15214196 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Lingao, HNYL-S10, HNYL-S10 PE library ILLUMINA 3593391468 bp
SRR15214197 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, ZSZYH, ZSZYH PE library ILLUMINA 8739095385 bp
SRR15214198 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Changjiang, HNYL-S09, HNYL-S09 PE library ILLUMINA 4093818991 bp
SRR15214199 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Changjiang, HNYL-S08, HNYL-S08 PE library ILLUMINA 4481770999 bp
SRR15214200 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Lingshui, HNYL-S05, HNYL-S05 PE library ILLUMINA 3616775671 bp
SRR15214201 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Wanning, HNYL-S04, HNYL-S04 PE library ILLUMINA 4643833678 bp
SRR15214202 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Anding, HNYL-S02, HNYL-S02 PE library ILLUMINA 5342666834 bp
SRR15214203 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Wenchang, HNYL-S01, HNYL-S01 PE library ILLUMINA 5040914655 bp
SRR15214204 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Danzhou, HNYL12, HNYL12 PE library ILLUMINA 8705906880 bp
SRR15214205 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Ledong, HNYL10, HNYL10 PE library ILLUMINA 9857535953 bp
SRR15214206 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Qiongzhong, HNYL08, HNYL08 PE library ILLUMINA 8783542797 bp
SRR15214207 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan\,Sanya, HNYL06, HNYL06 PE library ILLUMINA 8276724685 bp
SRR15214208 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, SIYH, SIYH PE library ILLUMINA 8849660884 bp
SRR15214209 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, YSLZ10, YSLZ10 PE library ILLUMINA 5660929112 bp
SRR15214210 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Daxin, GXYL9, GXYL9 PE library ILLUMINA 5232723679 bp
SRR15214211 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Daxin, GXYL8, GXYL8 PE library ILLUMINA 5131368790 bp
SRR15214212 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Daxin, GXYL7, GXYL7 PE library ILLUMINA 1665362592 bp
SRR15214213 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi\,Daxin, GXYL6, GXYL6 PE library ILLUMINA 1723922478 bp
SRR15214214 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Xinping, YNYL12, YNYL12 PE library ILLUMINA 1233961082 bp
SRR15214215 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Yuanjiang, YNYL11, YNYL11 PE library ILLUMINA 1523750559 bp
SRR15214216 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Yuanjiang, YNYL10, YNYL10 PE library ILLUMINA 1485320026 bp
SRR15214217 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Hekou, YNYL09, YNYL09 PE library ILLUMINA 1534897420 bp
SRR15214218 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Yuanyang, YNYL08, YNYL08 PE library ILLUMINA 15659243292 bp
SRR15214219 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, SD, SD PE library ILLUMINA 8032928056 bp
SRR15214220 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Yuanyang, YNYL07, YNYL07 PE library ILLUMINA 13707014463 bp
SRR15214221 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Yuanyang, YNYL05, YNYL05 PE library ILLUMINA 17398761498 bp
SRR15214222 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Jianshui, YNYL04, YNYL04 PE library ILLUMINA 14996214839 bp
SRR15214223 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Pingbian, YNYL03, YNYL03 PE library ILLUMINA 13527076977 bp
SRR15214224 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Pingbian, YNYL02, YNYL02 PE library ILLUMINA 14030274591 bp
SRR15214225 WGS of Litchi chinensis: adult wild evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan\,Pingbian, YNYL01, YNYL01 PE library ILLUMINA 13954927687 bp
SRR15214226 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from Thailand, KomA, KOM PE library ILLUMINA 7425239059 bp
SRR15214227 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from Thailand, KalokaA, KALOKA PE library ILLUMINA 8101400225 bp
SRR15214228 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Fujian, Caikengrouwa, CKRW PE library ILLUMINA 6469646251 bp
SRR15214229 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, Edanli, EDL PE library ILLUMINA 8567187838 bp
SRR15214230 WGS of Litchi chinensis: adult extremely early maturing cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Yunnan, Hemaoli, HML PE library ILLUMINA 7870698895 bp
SRR15214231 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, Ziniangxi, ZNX PE library ILLUMINA 9567139788 bp
SRR15214232 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, Zili, ZL PE library ILLUMINA 6755391515 bp
SRR15214233 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, Yuanhe, YH PE library ILLUMINA 5977392015 bp
SRR15214234 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, Wuheli, WHL PE library ILLUMINA 8300023172 bp
SRR15214235 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Hainan, Niuxinli, NXL PE library ILLUMINA 8649575046 bp
SRR15214236 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Siliangguo, SLG PE library ILLUMINA 6727302080 bp
SRR15214237 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Lingshanxiangli, GXLSXL PE library ILLUMINA 7107342029 bp
SRR15214238 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Jizuili, JZL PE library ILLUMINA 6131932732 bp
SRR15214239 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Jinzhong, JZ PE library ILLUMINA 8884730103 bp
SRR15214240 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Guinuo, GXGTGN PE library ILLUMINA 7382743344 bp
SRR15214241 WGS of Litchi chinensis: adult extremely early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Guizao, GZ PE library ILLUMINA 5667940891 bp
SRR15214242 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangxi, Goubei, GXGB PE library ILLUMINA 7241075296 bp
SRR15214243 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Xuehuaizi, XHZ PE library ILLUMINA 8663591772 bp
SRR15214244 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Xinxingxiangli, GDXXXL PE library ILLUMINA 6001421202 bp
SRR15214245 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Qixihong, QXH PE library ILLUMINA 5657652626 bp
SRR15214246 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Nuomici, NMC PE library ILLUMINA 5295985063 bp
SRR15214247 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, MS48, MS-48 PE library ILLUMINA 6817640842 bp
SRR15214248 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Maguili, MGL PE library ILLUMINA 6168240720 bp
SRR15214249 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Liuyuexue, LYX PE library ILLUMINA 9156755996 bp
SRR15214252 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library VII PACBIO_SMRT 6969273759 bp
SRR15214253 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library VI PACBIO_SMRT 8086763893 bp
SRR15214254 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library V PACBIO_SMRT 7373222795 bp
SRR15214255 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library IV PACBIO_SMRT 7017559088 bp
SRR15214256 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library III PACBIO_SMRT 6212864422 bp
SRR15214257 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Huaizhi, HZ PE library ILLUMINA 6751145691 bp
SRR15214258 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library II PACBIO_SMRT 7106030193 bp
SRR15214259 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, PacBio sequencing library I PACBIO_SMRT 7703098317 bp
SRR15214260 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, Buce of FZX Genome survey ILLUMINA 8139912232 bp
SRR15214261 WGS of Litchi chinensis: adult early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Feizixiao, FZX Genome survey ILLUMINA 22505449458 bp
SRR15214268 WGS of Litchi chinensis: adult late-maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Hexiachuan, HEXC PE library ILLUMINA 6595549977 bp
SRR15214269 WGS of Litchi chinensis: adult extremely early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Wengzao, WZ PE library ILLUMINA 7258159435 bp
SRR15214270 WGS of Litchi chinensis: adult extremely early maturing phenotype cultivated evengreen in productive stage hermaphrodite plant with leaf and leafbud from China:Guangdong, Sanyuehong, SANYH PE library ILLUMINA 7971064376 bp

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