Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA788424 This project aims to characterize and study the horizontal transfer between non-model species in a natural ecosystem: the Massane forest located in southern France. Aubin et al., 2021
1
Library Title Platform Total Base VCF File
SRR17214825 WGS of Prunus avium: wild adult plant with leaf from France: Massane reservation, Wild cherry ILLUMINA 13016928000 bp
PRJNA761776 The impact of gamma irradiation at the chromosomal level was assessed in four F1s derived from gamma irradiated sweet cherry parent plants. McCord et al., 2022
4
Library Title Platform Total Base VCF File
SRR15825582 WGS of Prunus avium: mature sweet medium size\, medium texture fruit phenotype plant with leaf from USA: Washington State, Irradiated_Cherry_F1_3-14 OXFORD_NANOPORE 2563398969 bp
SRR15825583 WGS of Prunus avium: mature sweet\, small\, soft fruit phenotype plant with leaf from USA: Washington State, Irradiated_Cherry_F1_3-1 OXFORD_NANOPORE 3362441292 bp
SRR15825584 WGS of Prunus avium: mature balanced flavor\, small\, crunchy texture fruit phenotype plant with leaf from USA: Washington State, Irradiated_Cherry_F1_2-2 OXFORD_NANOPORE 918137204 bp
SRR15825585 WGS of Prunus avium: mature bitter/acidic\, medium-small\, firm texture fruit phenotype plant with leaf from USA: Washington State, Irradiated_Cherry_F1_1-15 OXFORD_NANOPORE 1227327051 bp
PRJNA705581 Total genomic DNA was extracted using CTAB method. Paired-end 150bp library was constructed and sequeced on Illumina HiSeq X. -
1
Library Title Platform Total Base VCF File
SRR13810431 WGS of Prunus avium: 2 years young fruit period stage plant with young leaves, Staccato, A1 ILLUMINA 8528515500 bp
PRJNA547767 Prunus avium strain:F12/1 Genome sequencing and assembly。 -
1
Library Title Platform Total Base VCF File
SRR9222867 WGS of Prunus avium: leaf from Chile, F12, F1201 ILLUMINA 21688209143 bp
PRJNA544857 Rainier sequence genome. -
1
Library Title Platform Total Base VCF File
SRR9127927 WGS of Prunus avium: leaf from Chile, Rainier, Rainier 1 ILLUMINA 27894608531 bp
PRJNA419491 With the aim to study the effects of the domestication at a genome-wide scale in cherry, researchers set out to reconstruct the genome sequence of a modern cherry variety ( BigStar*) and to analyze the genetic variation in samples exposed to different rates of selective pressure, such as wild cherry trees, landraces and the more recent modern varieties. Pinosio et al., 2020
106
Library Title Platform Total Base VCF File
SRR6371795 WGS of Prunus avium: leaf, Late Lory ILLUMINA 1199144750 bp
SRR6371796 WGS of Prunus avium: leaf, Patty Skeena ILLUMINA 1155579000 bp
SRR6371802 WGS of Prunus avium: leaf, Adriana ILLUMINA 1276619500 bp
SRR6371804 WGS of Prunus avium: leaf, Kwar_13-2 ILLUMINA 13577987600 bp
SRR6371812 WGS of Prunus avium: leaf, Kwar_2-1 ILLUMINA 1630436600 bp
SRR6371814 WGS of Prunus avium: leaf, Agiorgitiko Lilantiou ILLUMINA 970362000 bp
SRR6371816 WGS of Prunus avium: leaf, Tieton ILLUMINA 1917117750 bp
SRR6371817 WGS of Prunus avium: leaf, Ulster ILLUMINA 1747413500 bp
SRR6371818 WGS of Prunus avium: leaf, Bella Italia ILLUMINA 1061268500 bp
SRR6371819 WGS of Prunus avium: leaf, Bertiello ILLUMINA 788058750 bp
SRR6371823 WGS of Prunus avium: leaf, Capo di Serpe ILLUMINA 1101046000 bp
SRR6371828 WGS of Prunus avium: leaf, Giorgia ILLUMINA 1350401000 bp
SRR6371829 WGS of Prunus avium: leaf, Giulietta ILLUMINA 1014927750 bp
SRR6371832 WGS of Prunus avium: leaf, Kavics ILLUMINA 1102745500 bp
SRR6371835 WGS of Prunus avium: leaf, Cholomontas2 ILLUMINA 1031626000 bp
SRR6371836 WGS of Prunus avium: leaf, Hayntou3 ILLUMINA 936464250 bp
SRR6371837 WGS of Prunus avium: leaf, Cormor ILLUMINA 1130834750 bp
SRR6371851 WGS of Prunus avium: leaf, IG6 ILLUMINA 1081857250 bp
SRR6371852 WGS of Prunus avium: leaf, Nimphaea4 ILLUMINA 1059118500 bp
SRR6371853 WGS of Prunus avium: leaf, Vorras3 ILLUMINA 1515680500 bp
SRR6371854 WGS of Prunus avium: leaf, Enrica ILLUMINA 9844419000 bp
SRR6371855 WGS of Prunus avium: leaf, Van ILLUMINA 10013217000 bp
SRR6371856 WGS of Prunus avium: leaf, Regina ILLUMINA 9551152750 bp
SRR6371862 WGS of Prunus avium: leaf, Katalin ILLUMINA 23126049750 bp
SRR6371865 WGS of Prunus avium: leaf, Hayntou1 ILLUMINA 10102374000 bp
SRR6371867 WGS of Prunus avium: leaf, Germersdorfer ILLUMINA 11457938800 bp
SRR6371869 WGS of Prunus avium: leaf, Ravenna ILLUMINA 10368569500 bp
SRR6371870 WGS of Prunus avium: leaf, Bakirtzeika ILLUMINA 10829662500 bp
SRR6371871 WGS of Prunus avium: leaf, Ferrovia ILLUMINA 10251823250 bp
SRR6371872 WGS of Prunus avium: leaf, Kordia ILLUMINA 19277567600 bp
SRR6371873 WGS of Prunus avium: leaf, Summit ILLUMINA 9891184600 bp
SRR6371874 WGS of Prunus avium: leaf, Hedelfinger ILLUMINA 944323500 bp
SRR6371876 WGS of Prunus avium: leaf, Del Monte ILLUMINA 1012871750 bp
SRR6371878 WGS of Prunus avium: leaf, Ciliegia di Udine ILLUMINA 1249228000 bp
SRR6371880 WGS of Prunus avium: leaf, Francia ILLUMINA 1114978000 bp
SRR6371883 WGS of Prunus avium: leaf, Donnisens Gelbe Knorfel ILLUMINA 1217685000 bp
SRR6371889 WGS of Prunus avium: leaf, Melanzana ILLUMINA 1188083500 bp
SRR6371792 WGS of Prunus avium: leaf, Larian ILLUMINA 1477970500 bp
SRR6371793 WGS of Prunus avium: leaf, Lapins ILLUMINA 1268576500 bp
SRR6371794 WGS of Prunus avium: leaf, Linda ILLUMINA 1363671500 bp
SRR6371797 WGS of Prunus avium: leaf, Margit ILLUMINA 1122581500 bp
SRR6371798 WGS of Prunus avium: leaf, Sumini ILLUMINA 1353894250 bp
SRR6371799 WGS of Prunus avium: leaf, Santina ILLUMINA 2060673750 bp
SRR6371800 WGS of Prunus avium: leaf, Techlovan ILLUMINA 1434721250 bp
SRR6371801 WGS of Prunus avium: leaf, Sunburst ILLUMINA 1312724500 bp
SRR6371803 WGS of Prunus avium: leaf, Maia_1-3 ILLUMINA 12802931400 bp
SRR6371805 WGS of Prunus avium: leaf, Douc_4-2 ILLUMINA 16722464200 bp
SRR6371806 WGS of Prunus avium: leaf, 9-465 ILLUMINA 11256375000 bp
SRR6371807 WGS of Prunus avium: leaf, 5-436 ILLUMINA 10668779000 bp
SRR6371808 WGS of Prunus avium: leaf, IG4 ILLUMINA 10632038500 bp
SRR6371809 WGS of Prunus avium: leaf, Katafito1 ILLUMINA 10322609250 bp
SRR6371810 WGS of Prunus avium: leaf, Blaze Star ILLUMINA 1367366000 bp
SRR6371811 WGS of Prunus avium: leaf, Big Lory ILLUMINA 1273306250 bp
SRR6371815 WGS of Prunus avium: leaf, Badacsony ILLUMINA 1231480000 bp
SRR6371820 WGS of Prunus avium: leaf, Belge ILLUMINA 1190998250 bp
SRR6371821 WGS of Prunus avium: leaf, Bella di Firenze ILLUMINA 717886500 bp
SRR6371822 WGS of Prunus avium: leaf, Black Jant ILLUMINA 1115675250 bp
SRR6371824 WGS of Prunus avium: leaf, Canada Giant Summita ILLUMINA 941751500 bp
SRR6371825 WGS of Prunus avium: leaf, Cashmere ILLUMINA 1422740000 bp
SRR6371826 WGS of Prunus avium: leaf, Celeste Sumpaca ILLUMINA 998129500 bp
SRR6371827 WGS of Prunus avium: leaf, Early Lory ILLUMINA 1416600000 bp
SRR6371830 WGS of Prunus avium: leaf, Hartland ILLUMINA 1096147500 bp
SRR6371831 WGS of Prunus avium: leaf, Isabella ILLUMINA 1824142500 bp
SRR6371833 WGS of Prunus avium: leaf, Lala Star ILLUMINA 1191766750 bp
SRR6371834 WGS of Prunus avium: leaf, Cholomontas4 ILLUMINA 996867750 bp
SRR6371838 WGS of Prunus avium: leaf, 7-460 ILLUMINA 1189030000 bp
SRR6371839 WGS of Prunus avium: leaf, 4-434 ILLUMINA 1334624000 bp
SRR6371840 WGS of Prunus avium: leaf, Canebola1 ILLUMINA 956649750 bp
SRR6371841 WGS of Prunus avium: leaf, 8-464 ILLUMINA 1299202500 bp
SRR6371842 WGS of Prunus avium: leaf, IG2 ILLUMINA 1216697750 bp
SRR6371843 WGS of Prunus avium: leaf, IG1 ILLUMINA 1030791750 bp
SRR6371844 WGS of Prunus avium: leaf, Nimphaea1 ILLUMINA 969530000 bp
SRR6371845 WGS of Prunus avium: leaf, Nimphaea3 ILLUMINA 830602750 bp
SRR6371846 WGS of Prunus avium: leaf, Katafito4 ILLUMINA 801844250 bp
SRR6371847 WGS of Prunus avium: leaf, LE5 ILLUMINA 1148400500 bp
SRR6371848 WGS of Prunus avium: leaf, Katafito2 ILLUMINA 1289333000 bp
SRR6371849 WGS of Prunus avium: leaf, Katafito3 ILLUMINA 1014306500 bp
SRR6371850 WGS of Prunus avium: leaf, IG5 ILLUMINA 1249860250 bp
SRR6371857 WGS of Prunus avium: leaf, Stella ILLUMINA 9866841250 bp
SRR6371859 WGS of Prunus avium: leaf, Vorras4 ILLUMINA 926743250 bp
SRR6371863 WGS of Prunus avium: leaf, Brooks ILLUMINA 17370400212 bp
SRR6371864 WGS of Prunus avium: leaf, Durone di Vignola ILLUMINA 11077500600 bp
SRR6371866 WGS of Prunus avium: leaf, Burlat ILLUMINA 10216894600 bp
SRR6371868 WGS of Prunus avium: leaf, Basler Adlerkirsche ILLUMINA 9691085500 bp
SRR6371875 WGS of Prunus avium: leaf, Giapponese ILLUMINA 1034742750 bp
SRR6371877 WGS of Prunus avium: leaf, Cola Femmina ILLUMINA 1311437250 bp
SRR6371879 WGS of Prunus avium: leaf, Cavaliere ILLUMINA 990125000 bp
SRR6371881 WGS of Prunus avium: leaf, Etiche Bianche ILLUMINA 1089812500 bp
SRR6371882 WGS of Prunus avium: leaf, Durone di Bisceglie ILLUMINA 1375969500 bp
SRR6371884 WGS of Prunus avium: leaf, Vasiliadi ILLUMINA 880043000 bp
SRR6371885 WGS of Prunus avium: leaf, Vesseaux ILLUMINA 1293681250 bp
SRR6371886 WGS of Prunus avium: leaf, Zuccaro ILLUMINA 1764938750 bp
SRR6371887 WGS of Prunus avium: leaf, 10-470 ILLUMINA 1392981000 bp
SRR6371888 WGS of Prunus avium: leaf, Mavro Proimo Vitalou ILLUMINA 1043248500 bp
SRR6371890 WGS of Prunus avium: leaf, Montagnola ILLUMINA 1063864750 bp
SRR6371891 WGS of Prunus avium: leaf, Schneiders ILLUMINA 1116648750 bp
SRR6371892 WGS of Prunus avium: leaf, 1-430 ILLUMINA 1270333750 bp
SRR6371893 WGS of Prunus avium: leaf, 2-431 ILLUMINA 1144149750 bp
SRR6412211 WGS of Prunus avium: berry, Big Star ILLUMINA 9931594800 bp
SRR6412212 WGS of Prunus avium: leaf, Big Star ILLUMINA 5691187800 bp
SRR6412213 WGS of Prunus avium: wood, Big Star ILLUMINA 7467116200 bp
SRR6412214 WGS of Prunus avium: flower, Big Star ILLUMINA 9537127800 bp
SRR6371860 WGS of Prunus avium: leaf, Big Star ILLUMINA 17309015886 bp
SRR6371813 WGS of Prunus avium: leaf, Big Star ILLUMINA 9936577556 bp
SRR6371858 WGS of Prunus avium: leaf, Big Star ILLUMINA 16434150400 bp
SRR6371861 WGS of Prunus avium: leaf, Big Star ILLUMINA 16563536528 bp

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