| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJNA310042 |
Prunus davidiana high depth resequencing |
Yu et al., 2018 |
 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR3138171 |
WGS of Prunus davidiana: plant with leaf from China, Bai Hua Shan Tao, PW05 |
ILLUMINA |
11750996000 bp |
|
| SRR3141016 |
WGS of Prunus davidiana: plant with leaf from China, Hong Hua Shan Tao, PW06 |
ILLUMINA |
12271064400 bp |
|
| SRR3141018 |
WGS of Prunus davidiana: plant with leaf from China:Shanxi, Shan Gan Shan Tao, PW07 |
ILLUMINA |
12002606200 bp |
|
|
| PRJNA509595 |
Prunus davidiana resequencing |
Cao et al., 2022 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR8303456 |
WGS of Prunus davidiana: young plant with leaf from China, Ankou Shan Tao, ZGSP-566 |
ILLUMINA |
2402882000 bp |
|
| SRR8303478 |
WGS of Prunus davidiana: young plant with leaf from China, Chui Zhi Shan Tao 2#, ZGSP-830 |
ILLUMINA |
3597612900 bp |
|
| SRR8303479 |
WGS of Prunus davidiana: young plant with leaf from China, Chui Zhi Shan Tao 1#, ZGSP-829 |
ILLUMINA |
5335902600 bp |
|
|
| PRJNA645279 |
The pan-genome of Prunus davidiana |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR12283365 |
WGS of Prunus davidiana: young plant with leaf from China, Zhou Xing Shan Tao 1#, ZGSP-021 |
ILLUMINA |
1412028668 bp |
|
| SRR12283376 |
WGS of Prunus davidiana: young plant with leaf from China, Bai Hua Shan Tao 1#, ZGSP-020 |
ILLUMINA |
13433970600 bp |
|
| SRR12283443 |
WGS of Prunus davidiana: young plant with leaf from China, Shan Gan Shan Tao 1#, ZGSP-031 |
ILLUMINA |
13480937100 bp |
|
| SRR12283444 |
WGS of Prunus davidiana: young plant with leaf from China, Hong Hua Shan Tao 1#, ZGSP-029 |
ILLUMINA |
12180726000 bp |
|
|
| PRJNA655343 |
Genome assemblies of Prunus davidiana |
Tan et al., 2021 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR12450812 |
WGS of Prunus davidiana: plant with leaf from China: Tai-an\,Shandong, ST, ST |
ILLUMINA |
56361488400 bp |
|
| SRR12450841 |
WGS of Prunus davidiana: plant with leaf from China: Tai-an\,Shandong, ST, ST |
PACBIO_SMRT |
98651074337 bp |
|
|
| PRJNA671803 |
Prunus Genome sequencing and assembly |
Guo et al., 2021 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR12920639 |
WGS of Prunus davidiana: plant with leaf from China:ShaanXi, wx207 |
ILLUMINA |
3841984200 bp |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
3