Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
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Project

Bioproject Description Publication GVCF File Library Num.
PRJNA532832 Using the Pacific Bioscience Sequel and Illumina HiSeq X Ten platforms to assemble genome of Diospyros oleifera Suo et al., 2020
38
Library Title Platform Total Base VCF File
SRR8981050 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 12313674900 bp
SRR8981051 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 8534567100 bp
SRR8981052 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 8133782100 bp
SRR8981053 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 7998278700 bp
SRR8981054 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 15771501000 bp
SRR8981055 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 15375572100 bp
SRR8981056 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 35975051400 bp
SRR8981057 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 14307025500 bp
SRR8981058 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 13351368300 bp
SRR8981059 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 13353598500 bp
SRR8981060 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 13602453900 bp
SRR8981061 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 13425858900 bp
SRR8981062 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 24027423600 bp
SRR8981063 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 16802132400 bp
SRR9040497 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 34764954000 bp
SRR9040498 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3031078781 bp
SRR9040499 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 18785461500 bp
SRR9040500 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera ILLUMINA 44687960100 bp
SRR9040502 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3250395614 bp
SRR9040503 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 8032456175 bp
SRR9040504 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 5424592433 bp
SRR9040505 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3225405453 bp
SRR9040506 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4693156944 bp
SRR9040507 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3838944510 bp
SRR9040508 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3494996480 bp
SRR9040509 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4290567050 bp
SRR9040510 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4601885128 bp
SRR9040511 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3280140021 bp
SRR9040512 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3563137262 bp
SRR9040513 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 5534488506 bp
SRR9040514 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 3046087606 bp
SRR9040515 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4735217902 bp
SRR9040516 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4215478196 bp
SRR9040517 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4429981800 bp
SRR9040518 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 6176292756 bp
SRR9040519 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 10412422738 bp
SRR9040520 WGS of Diospyros oleifera:seedling plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 6444104196 bp
SRR9040501 WGS of Diospyros oleifera:flowering stage and fruit stage plant with leave from China,Dol,Diospyros oleifera PACBIO_SMRT 4054253237 bp
PRJNA562043 A chromosome-scale genome assembly for Diospyros oleifera by integrating Illumina sequencing, single-molecule real-time sequencing, and high-throughput chromosome conformation capture techniques. Zhu et al., 2019
21
Library Title Platform Total Base VCF File
SRR10071588 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-10 PACBIO_SMRT 4005804590 bp
SRR10071589 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-09 PACBIO_SMRT 5322033586 bp
SRR10071590 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-08 PACBIO_SMRT 4143122157 bp
SRR10071591 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-07 PACBIO_SMRT 3349487265 bp
SRR10071592 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-06 PACBIO_SMRT 6472158351 bp
SRR10071593 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-05 PACBIO_SMRT 6292733115 bp
SRR10071594 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-04 PACBIO_SMRT 1273221279 bp
SRR10071595 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-22 ILLUMINA 3463186548 bp
SRR10071596 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-21 PACBIO_SMRT 6390435770 bp
SRR10071598 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-20 PACBIO_SMRT 3669402649 bp
SRR10071599 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-19 PACBIO_SMRT 6057747621 bp
SRR10071600 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-18 PACBIO_SMRT 6161085210 bp
SRR10071601 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-17 PACBIO_SMRT 4378253499 bp
SRR10071602 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-16 PACBIO_SMRT 5444366271 bp
SRR10071603 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-15 PACBIO_SMRT 6276506422 bp
SRR10071604 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-14 PACBIO_SMRT 6487884003 bp
SRR10071605 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-13 PACBIO_SMRT 1089621844 bp
SRR10071606 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-12 PACBIO_SMRT 5899736437 bp
SRR10071607 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-11 PACBIO_SMRT 1724603536 bp
SRR10071608 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-02 ILLUMINA 37563907114 bp
SRR10071609 WGS of Diospyros oleifera: plant with leaf from China: Shaanxi,Youshi,T-01 ILLUMINA 37161675894 bp
PRJNA839108 Transcriptome, targeted-capture, and genome skimming sequencing to overcome these limitations for the diverse and ecologically important plant clade Ericales -
1
Library Title Platform Total Base VCF File
SRR19405847 WGS of Diospyros oleifera:mature plant with leaf from USA,,UFL_394806_P002_WG05 ILLUMINA 286000040 bp

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