| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJNA1073018 |
Chinese white pear cultivars Raw sequence reads. |
- |
 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR27896876 |
WGS of Pyrus x bretschneideri: leaf from China: Dangshan County\, Anhui Province, Dangshansuli, pear, DS_gt100k |
OXFORD_NANOPORE |
94327879999 bp |
|
| SRR27896877 |
WGS of Pyrus x bretschneideri: leaf from China: Dangshan County\, Anhui Province, Dangshansuli, pear, m84070_230625_091226 |
PACBIO_SMRT |
28610970746 bp |
|
|
| PRJNA852504 |
The genome sequencing of pear cultuvar Yali. |
Liu et al., 2022 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR19843918 |
WGS of Pyrus x bretschneideri: 15 year old young plant with leaf from China, Ya Li, Next generation |
ILLUMINA |
63571472100 bp |
|
| SRR19843919 |
WGS of Pyrus x bretschneideri: 15 year old young plant with leaf from China, Ya Li, Pacbio |
PACBIO_SMRT |
57389590303 bp |
|
|
| PRJNA838771 |
DNA methylation sequencing of pear fruit. |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR19239124 |
WGS of Pyrus x bretschneideri: 154 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS154 |
ILLUMINA |
21376334400 bp |
|
| SRR19239125 |
WGS of Pyrus x bretschneideri: 140 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS140 |
ILLUMINA |
24301507800 bp |
|
| SRR19239126 |
WGS of Pyrus x bretschneideri: 126 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS126 |
ILLUMINA |
27650265600 bp |
|
| SRR19239127 |
WGS of Pyrus x bretschneideri: 112 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS112 |
ILLUMINA |
22615392900 bp |
|
| SRR19239128 |
WGS of Pyrus x bretschneideri: 98 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS98 |
ILLUMINA |
23221542300 bp |
|
| SRR19239129 |
WGS of Pyrus x bretschneideri: 84 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS84 |
ILLUMINA |
22402508100 bp |
|
| SRR19239130 |
WGS of Pyrus x bretschneideri: 70 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS70 |
ILLUMINA |
23419515900 bp |
|
| SRR19239131 |
WGS of Pyrus x bretschneideri: 56 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS56 |
ILLUMINA |
24355043100 bp |
|
| SRR19239132 |
WGS of Pyrus x bretschneideri: 168 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS168 |
ILLUMINA |
27400411500 bp |
|
| SRR19239133 |
WGS of Pyrus x bretschneideri: 42 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS42 |
ILLUMINA |
21903137700 bp |
|
| SRR19239134 |
WGS of Pyrus x bretschneideri: 28 days after flower blooming plant with fruit flesh from China: Nanjing\, Jiangsu Province, Dangshansuli, DS28 |
ILLUMINA |
21376867500 bp |
|
|
| PRJNA724820 |
Whole genome re-sequencing of the 23 wild and cultivated accessions from Pyrus species collected was performed using an Illumina HiSeq sequencing platform. |
Li et al., 2021 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR14318827 |
WGS of Pyrus x bretschneideri: replicate = biological replicate 3 plant with leaf from China: Qinhuangdao, Guali, PWH03 |
ILLUMINA |
16961665500 bp |
|
| SRR14318838 |
WGS of Pyrus x bretschneideri: replicate = biological replicate 2 plant with leaf from China: Qinhuangdao, Guali, PWH02 |
ILLUMINA |
15967193100 bp |
|
| SRR14318839 |
WGS of Pyrus x bretschneideri: replicate = biological replicate 1 plant with leaf from China: Qinhuangdao, Guali, PWH01 |
ILLUMINA |
25024592100 bp |
|
|
| PRJNA574796 |
Pyrus x bretschneideri cultivar:Yali Raw sequence reads. |
Liu et al., 2020 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR10345465 |
WGS of Pyrus x bretschneideri: young leaves were collected 15 days after flowering from China: Shandong Yantai, 'Yali',2 |
PACBIO_SMRT |
3048169458 bp |
|
| SRR10345466 |
WGS of Pyrus x bretschneideri: young leaves were collected 15 days after flowering from China: Shandong Yantai, 'Yali',1 |
ILLUMINA |
4979917602 bp |
|
|
| PRJNA565550 |
Pyrus x bretschneideri cultivar:Hongxiangsu Genome sequencing |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR10143592 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170723_071557-4_H01 |
PACBIO_SMRT |
4053800981 bp |
|
| SRR10143593 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170723_071557-3_G01 |
PACBIO_SMRT |
5691596087 bp |
|
| SRR10143594 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170721_060626-4_F01 |
PACBIO_SMRT |
7813539237 bp |
|
| SRR10143595 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54040_20170801_084901-1_B01 |
PACBIO_SMRT |
4555354515 bp |
|
| SRR10143596 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54040_20170730_083123-1_A01 |
PACBIO_SMRT |
5565411599 bp |
|
| SRR10143597 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54040_20170728_083724-4_H01 |
PACBIO_SMRT |
5159629989 bp |
|
| SRR10143598 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54040_20170728_083724-3_G01 |
PACBIO_SMRT |
4677662427 bp |
|
| SRR10143599 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54040_20170728_083724-2_F01 |
PACBIO_SMRT |
5082163684 bp |
|
| SRR10143600 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, CL100108501 |
BGISEQ |
92461989600 bp |
|
| SRR10143601 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170805_095607-1_H01 |
PACBIO_SMRT |
4739491360 bp |
|
| SRR10143602 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170803_132201-4_G01 |
PACBIO_SMRT |
4602326775 bp |
|
| SRR10143603 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170728_083850-1_B01 |
PACBIO_SMRT |
5991001532 bp |
|
| SRR10143604 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170726_091347-4_E01 |
PACBIO_SMRT |
4811221482 bp |
|
| SRR10143605 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54160_20170726_091347-3_D01 |
PACBIO_SMRT |
4771660821 bp |
|
| SRR10143606 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, r54040_20170725_113948-1_A01 |
PACBIO_SMRT |
4166420425 bp |
|
| SRR10143607 |
WGS of Pyrus x bretschneideri: adult plant with leaf from China:Zhengzhou, Hongxiangsu, wHAXPI062450-77 |
ILLUMINA |
24404493600 bp |
|
|
| PRJNA524076 |
Genome-Wide Sequence Variation Identification and Stone Cell Formation-Related Genes Comparisons Based on the Re-sequencing of the ‘Dangshan Su’ and ‘Lianglizaosu’ Varieties of Chinese White Pear (Pyrus bretschneideri Rehd.). |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR8639653 |
WGS of Pyrus x bretschneideri: leaves from China: Dangshan County, Lianglizaosu, wHAXPI036082-16 |
ILLUMINA |
21648114900 bp |
|
| SRR8639654 |
WGS of Pyrus x bretschneideri: leaves from China: Dangshan County, Dangshan Su, wHAXPI036083-17 |
ILLUMINA |
21572601300 bp |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
2