| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJNA827350 |
11 F1 Salix sequence data, illumina wgs, nanopore, dnb-seq rna-seq |
Hyden et al., 2023 |
 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR18795226 |
WGS of Salix suchowensis: P63 ecotype plant with young leaf, P63_illumina_dna |
ILLUMINA |
48160666800 bp |
|
| SRR18795248 |
WGS of Salix suchowensis: P295 ecotype plant with young leaf, P295_illumina_dna |
ILLUMINA |
48100966200 bp |
|
| SRR18795270 |
WGS of Salix suchowensis: P63 ecotype plant with young leaf, P63_nanopore_dna |
OXFORD_NANOPORE |
26442413345 bp |
|
| SRR18795273 |
WGS of Salix suchowensis: P295 ecotype plant with young leaf, P295_nanopore_dna |
OXFORD_NANOPORE |
28965781687 bp |
|
| SRR18795274 |
WGS of Salix suchowensis: P294 ecotype plant with young leaf, P294_nanopore_dna |
OXFORD_NANOPORE |
26553440755 bp |
|
| SRR18795296 |
WGS of Salix suchowensis: P294 ecotype plant with young leaf, P294_illumina_dna |
ILLUMINA |
48084159600 bp |
|
|
| PRJNA736204 |
BAM files of Salix suchowensis NGS sequence include 22 root and 33 leaf samples |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR14764837 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 14_1, Cut5_L1 |
ILLUMINA |
18840342900 bp |
|
| SRR14764838 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 12_1, Cut4_L1 |
ILLUMINA |
17523221700 bp |
|
| SRR14764839 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 9_1, Cut3_L1 |
ILLUMINA |
17755202100 bp |
|
| SRR14764840 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 5_r3, Cut2_R3 |
ILLUMINA |
16478324100 bp |
|
| SRR14764841 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 63_1, Cut22_L1 |
ILLUMINA |
13789630800 bp |
|
| SRR14764842 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 58_1, Cut21_L1 |
ILLUMINA |
14760898200 bp |
|
| SRR14764843 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 55_r2, Cut20_R2 |
ILLUMINA |
16042495500 bp |
|
| SRR14764844 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 55_r1, Cut20_R1 |
ILLUMINA |
16048794900 bp |
|
| SRR14764845 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 55_1, Cut20_L1 |
ILLUMINA |
17547544200 bp |
|
| SRR14764846 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 5_r2, Cut2_R2 |
ILLUMINA |
18544596600 bp |
|
| SRR14764847 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 51_r4, Cut19-R3 |
ILLUMINA |
16062378900 bp |
|
| SRR14764848 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 51_r3, Cut19_R4 |
ILLUMINA |
24182391600 bp |
|
| SRR14764849 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 51_2, Cut19_L2 |
ILLUMINA |
15797595300 bp |
|
| SRR14764850 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 51_1, Cut19_L1 |
ILLUMINA |
16753886100 bp |
|
| SRR14764851 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 47_r2_3, Cut18_R3 |
ILLUMINA |
22818043200 bp |
|
| SRR14764852 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 47_r2_1, Cut18_R2 |
ILLUMINA |
20979494700 bp |
|
| SRR14764853 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 47_r1, Cut18_R1 |
ILLUMINA |
16436409900 bp |
|
| SRR14764854 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 47_3, Cut18_L3 |
ILLUMINA |
18981193200 bp |
|
| SRR14764855 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 46_1, Cut17_L1 |
ILLUMINA |
16475575200 bp |
|
| SRR14764856 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 43_1, Cut16_L1 |
ILLUMINA |
20438339700 bp |
|
| SRR14764857 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 5_r1, Cut2_R1 |
ILLUMINA |
18824937000 bp |
|
| SRR14764858 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 38_1, Cut15_L1 |
ILLUMINA |
20054141100 bp |
|
| SRR14764859 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 35_r3, Cut14_R3 |
ILLUMINA |
18719720100 bp |
|
| SRR14764860 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 35_r2, Cut14_R2 |
ILLUMINA |
18147263700 bp |
|
| SRR14764861 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 35_r1, Cut14_R1 |
ILLUMINA |
16483053600 bp |
|
| SRR14764862 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 35_3, Cut14_L3 |
ILLUMINA |
18130636200 bp |
|
| SRR14764863 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 35_2, Cut14_L2 |
ILLUMINA |
20215919100 bp |
|
| SRR14764864 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 35_1, Cut14_L1 |
ILLUMINA |
18841908600 bp |
|
| SRR14764865 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 34_r3, Cut13_R3 |
ILLUMINA |
17369533800 bp |
|
| SRR14764866 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 34_r2, Cut13_R2 |
ILLUMINA |
18297866400 bp |
|
| SRR14764867 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 34_r1, Cut13_R1 |
ILLUMINA |
18726343500 bp |
|
| SRR14764868 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 5_3, Cut2_L3 |
ILLUMINA |
15767037300 bp |
|
| SRR14764869 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 34_4, Cut13_L4 |
ILLUMINA |
19767729900 bp |
|
| SRR14764870 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 34_3, Cut13_L3 |
ILLUMINA |
18549654300 bp |
|
| SRR14764871 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 34_1, Cut13_L1 |
ILLUMINA |
19097213100 bp |
|
| SRR14764872 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 33_2, Cut12_L2 |
ILLUMINA |
19885293600 bp |
|
| SRR14764873 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 30_1, Cut11_L1 |
ILLUMINA |
17610991200 bp |
|
| SRR14764874 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 27_1, Cut10_L1 |
ILLUMINA |
17950130100 bp |
|
| SRR14764875 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 25_r3, Cut9_R3 |
ILLUMINA |
16390929300 bp |
|
| SRR14764876 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 25_r2, Cut9_R2 |
ILLUMINA |
16664108400 bp |
|
| SRR14764877 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 25_r1, Cut9_R1 |
ILLUMINA |
16601724900 bp |
|
| SRR14764878 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 25_3, Cut9_L3 |
ILLUMINA |
16885569300 bp |
|
| SRR14764879 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 5_2, Cut2_L2 |
ILLUMINA |
20847353400 bp |
|
| SRR14764880 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 25_2, Cut9_L2 |
ILLUMINA |
22511936400 bp |
|
| SRR14764881 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 25_1, Cut9_L1 |
ILLUMINA |
22222868400 bp |
|
| SRR14764882 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 24_r3, Cut8_R3 |
ILLUMINA |
18305594400 bp |
|
| SRR14764883 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 24_r2, Cut8_R2 |
ILLUMINA |
13809463200 bp |
|
| SRR14764884 |
WGS of Salix suchowensis: root from China:Jiangsu Province, YAF1, 24_r1, Cut8_R1 |
ILLUMINA |
15810377700 bp |
|
| SRR14764885 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 24_3, Cut8_L3 |
ILLUMINA |
24519205800 bp |
|
| SRR14764886 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 24_2, Cut8_L2 |
ILLUMINA |
19206506100 bp |
|
| SRR14764887 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 24_1, Cut8_L1 |
ILLUMINA |
20468146500 bp |
|
| SRR14764888 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 23_2, Cut7_L2 |
ILLUMINA |
19449822600 bp |
|
| SRR14764889 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 17_2, Cut6_L2 |
ILLUMINA |
19689326700 bp |
|
| SRR14764890 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 5_1, Cut2_L1 |
ILLUMINA |
21780066600 bp |
|
| SRR14764891 |
WGS of Salix suchowensis: leaf from China:Jiangsu Province, YAF1, 2_2, Cut1_L2 |
ILLUMINA |
21111043500 bp |
|
|
| PRJNA497989 |
Investigation of plant somatic mutations across different plant species Raw sequence reads |
Wang et al., 2019 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR10197852 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 43_1 |
ILLUMINA |
20438339700 bp |
|
| SRR10197853 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 38_1 |
ILLUMINA |
20054141100 bp |
|
| SRR10197854 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 33_2 |
ILLUMINA |
19885293600 bp |
|
| SRR10197855 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 30_1 |
ILLUMINA |
17610991200 bp |
|
| SRR10197856 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 27_1 |
ILLUMINA |
17950130100 bp |
|
| SRR10197857 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 23_2 |
ILLUMINA |
19449822600 bp |
|
| SRR10197858 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 2_2 |
ILLUMINA |
21111043500 bp |
|
| SRR10197859 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 17_2 |
ILLUMINA |
19689326700 bp |
|
| SRR10197860 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 9_1 |
ILLUMINA |
17755202100 bp |
|
| SRR10197861 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 63_1 |
ILLUMINA |
13789630800 bp |
|
| SRR10197862 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 58_1 |
ILLUMINA |
14760898200 bp |
|
| SRR10197863 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 46_1 |
ILLUMINA |
16475575200 bp |
|
| SRR10197864 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 14_1 |
ILLUMINA |
18840342900 bp |
|
| SRR10197865 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 12_1 |
ILLUMINA |
17523221700 bp |
|
| SRR8255647 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 55-r1 |
ILLUMINA |
16048794900 bp |
|
| SRR8255648 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 55-r2 |
ILLUMINA |
16042495500 bp |
|
| SRR8255649 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 51-r4 |
ILLUMINA |
24182391600 bp |
|
| SRR8255650 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 55_1 |
ILLUMINA |
17547544200 bp |
|
| SRR8255651 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 51_2 |
ILLUMINA |
15797595300 bp |
|
| SRR8255652 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 51-r3 |
ILLUMINA |
16062378900 bp |
|
| SRR8255653 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 5-r3 |
ILLUMINA |
16478324100 bp |
|
| SRR8255654 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 51_1 |
ILLUMINA |
16753886100 bp |
|
| SRR8255655 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 5-r1 |
ILLUMINA |
18824937000 bp |
|
| SRR8255656 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 5-r2 |
ILLUMINA |
18544596600 bp |
|
| SRR8255657 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 25-r2 |
ILLUMINA |
16664108400 bp |
|
| SRR8255658 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 25-r3 |
ILLUMINA |
16390929300 bp |
|
| SRR8255659 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 34_1 |
ILLUMINA |
19097213100 bp |
|
| SRR8255660 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 34_3 |
ILLUMINA |
18549654300 bp |
|
| SRR8255661 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 34_4 |
ILLUMINA |
19767729900 bp |
|
| SRR8255662 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 34-r1 |
ILLUMINA |
18726343500 bp |
|
| SRR8255663 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 34-r2 |
ILLUMINA |
18297866400 bp |
|
| SRR8255664 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 34-r3 |
ILLUMINA |
17369533800 bp |
|
| SRR8255665 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 35_1 |
ILLUMINA |
18841908600 bp |
|
| SRR8255666 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 35_2 |
ILLUMINA |
20215919100 bp |
|
| SRR8255667 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 24-r2 |
ILLUMINA |
13809463200 bp |
|
| SRR8255668 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 24-r3 |
ILLUMINA |
18305594400 bp |
|
| SRR8255669 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 25_1 |
ILLUMINA |
22222868400 bp |
|
| SRR8255670 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 25_2 |
ILLUMINA |
22511936400 bp |
|
| SRR8255671 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 24_1 |
ILLUMINA |
20468146500 bp |
|
| SRR8255672 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 24_2 |
ILLUMINA |
19206506100 bp |
|
| SRR8255673 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 24_3 |
ILLUMINA |
24519205800 bp |
|
| SRR8255674 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 24-r1 |
ILLUMINA |
15810377700 bp |
|
| SRR8255675 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 25_3 |
ILLUMINA |
16885569300 bp |
|
| SRR8255676 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 25-r1 |
ILLUMINA |
16601724900 bp |
|
| SRR8255677 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 5_3 |
ILLUMINA |
15767037300 bp |
|
| SRR8255678 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 5_2 |
ILLUMINA |
20847353400 bp |
|
| SRR8255679 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 47-r1 |
ILLUMINA |
16436409900 bp |
|
| SRR8255680 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 47_3 |
ILLUMINA |
18981193200 bp |
|
| SRR8255681 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 5_1 |
ILLUMINA |
21780066600 bp |
|
| SRR8255682 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 47-r2-3 |
ILLUMINA |
22818043200 bp |
|
| SRR8255683 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 35-r1 |
ILLUMINA |
16483053600 bp |
|
| SRR8255684 |
WGS of Salix suchowensis: vegetative stage plant with leaf from China: Nanjing University\, Jiangsu, YAF1, 35_3 |
ILLUMINA |
18130636200 bp |
|
| SRR8255685 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 35-r3 |
ILLUMINA |
18719720100 bp |
|
| SRR8255686 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 35-r2 |
ILLUMINA |
18147263700 bp |
|
| SRR8264843 |
WGS of Salix suchowensis: vegetative stage plant with root from China: Nanjing University\, Jiangsu, YAF1, 47-r2-1 |
ILLUMINA |
20979494700 bp |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
6