Species Info.

Omics Data

Omics Analysis

Seq. Analysis
Omics Analysis
Others

Project

Bioproject Description Publication GVCF File Library Num.
PRJNA1056246 mRNA-miRNA analyses reveal the involvement of CsbHLH1 and miR1446 in the regulation of caffeine biosynthesis in Camellia sinensis Jin et al., 2023
15
Library Title Platform Total Base VCF File
SRR27332422 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Xianghong3hao, XH3H1 DNBSEQ 546.15 M
SRR27332423 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Kucha3hao, KC3H3 DNBSEQ 524.09 M
SRR27332424 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Kucha3hao, KC3H2 DNBSEQ 517.51 M
SRR27332425 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Kucha3hao, KC3H1 DNBSEQ 518.14 M
SRR27332426 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Fudingdabai, FDDB3 DNBSEQ 544.58 M
SRR27332427 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Fudingdabai, FDDB2 DNBSEQ 550.24 M
SRR27332428 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Fudingdabai, FDDB1 DNBSEQ 531.71 M
SRR27332429 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Bixiangzao, BXZ3 DNBSEQ 549.29 M
SRR27332430 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Yaoshanxiylv, YSXL3 DNBSEQ 481.53 M
SRR27332431 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Yaoshanxiylv, YSXL2 DNBSEQ 531.97 M
SRR27332432 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Yaoshanxiylv, YSXL1 DNBSEQ 537.06 M
SRR27332433 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Xianghong3hao, XH3H3 DNBSEQ 526.58 M
SRR27332434 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Xianghong3hao, XH3H2 DNBSEQ 514.51 M
SRR27332435 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Bixiangzao, BXZ2 DNBSEQ 555.38 M
SRR27332436 miRNA-Seq of Camellia sinensis: one year old and one bud\, one leaf stage plant with one bud\, one leaf from China: Changsha County, Bixiangzao, BXZ1 DNBSEQ 548.46 M
PRJNA927052 The RNA-seq data of Camellia sinensis cv. Baiye No.1, including buds and leaves from four periods. Xu et al., 2023
12
Library Title Platform Total Base VCF File
SRR23217724 miRNA-Seq of Camellia sinensis: regreening stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 607.96 M
SRR23217725 miRNA-Seq of Camellia sinensis: regreening stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 769.12 M
SRR23217726 miRNA-Seq of Camellia sinensis: regreening stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 608.64 M
SRR23217727 miRNA-Seq of Camellia sinensis: bud-prealbinism stage plant with bud from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 667.67 M
SRR23217730 miRNA-Seq of Camellia sinensis: albinism stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 624.11 M
SRR23217731 miRNA-Seq of Camellia sinensis: green stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 823.42 M
SRR23217732 miRNA-Seq of Camellia sinensis: green stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 637.30 M
SRR23217734 miRNA-Seq of Camellia sinensis: albinism stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 661.43 M
SRR23217723 miRNA-Seq of Camellia sinensis: green stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 733.87 M
SRR23217728 miRNA-Seq of Camellia sinensis: bud-prealbinism stage plant with bud from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 680.83 M
SRR23217729 miRNA-Seq of Camellia sinensis: bud-prealbinism stage plant with bud from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 790.31 M
SRR23217733 miRNA-Seq of Camellia sinensis: albinism stage plant with leaf from China: Guizhou, Baiye No.1, tissue sample ILLUMINA 647.48 M
PRJNA838286 This study investigates how tea plants respond to D. bellidis infection by analyzing miRNAs through small RNA sequencing over a two-day period. -
6
Library Title Platform Total Base VCF File
SRR19215437 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 6, TDb3 for Small RNA analysis ILLUMINA 623.60 M
SRR19215438 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 5, TDb2 for Small RNA analysis ILLUMINA 686.82 M
SRR19215439 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 4, TDb1 for Small RNA analysis ILLUMINA 710.38 M
SRR19215440 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 3, Mock3 for Small RNA analysis ILLUMINA 571.89 M
SRR19215441 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 2, Mock2 for Small RNA analysis ILLUMINA 639.34 M
SRR19215442 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 1, Mock1 for Small RNA analysis ILLUMINA 630.38 M
PRJNA824005 The study investigates tea leaf spot caused by E. sorghinum in Guizhou Province, China, sequencing miRNA in infected tea leaves to understand host-pathogen interactions and disease resistance. Huang et al., 2023
6
Library Title Platform Total Base VCF File
SRR18654195 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha, Mock3 (Uninfected treatment) for miRNA analysis ILLUMINA 571.89 M
SRR18654196 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 5, Mock2 (Uninfected treatment) for miRNA analysis ILLUMINA 639.34 M
SRR18654197 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 4, Mock1 (Uninfected treatment) for miRNA analysis ILLUMINA 630.38 M
SRR18654198 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 3, TEs3 (Infected treatment) for miRNA analysis ILLUMINA 503.11 M
SRR18654199 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 2, TEs2 (Infected treatment) for miRNA analysis ILLUMINA 561.57 M
SRR18654200 miRNA-Seq of Camellia sinensis: 5 years old plant with tea leaves from China: Guizhou University, Fuding-dabaicha 1, TEs1 (Infected treatment) for miRNA analysis ILLUMINA 535.63 M
PRJNA811108 The study investigates tea leaf spot caused by Epicoccum nigrum in Sinan County, Guizhou Province, China, analyzing miRNAs to understand the pathogenesis mechanism of the pathogen. -
6
Library Title Platform Total Base VCF File
SRR18163558 miRNA-Seq of Camellia sinensis: 2 day old plant with leaf from China: Sinan County\, Guizhou Province, TEn3 (infected treatment) ILLUMINA 525.96 M
SRR18163559 miRNA-Seq of Camellia sinensis: 2 day old plant with leaf from China: Sinan County\, Guizhou Province, TEn2 (infected treatment) ILLUMINA 564.26 M
SRR18163560 miRNA-Seq of Camellia sinensis: 2 day old plant with leaf from China: Sinan County\, Guizhou Province, TEn1 (infected treatment) ILLUMINA 549.87 M
SRR18163561 miRNA-Seq of Camellia sinensis: 2 day old plant with leaf from China: Sinan County\, Guizhou Province, Mock3 (uninfected treatment) ILLUMINA 571.89 M
SRR18163562 miRNA-Seq of Camellia sinensis: 2 day old plant with leaf from China: Sinan County\, Guizhou Province, Mock2 (uninfected treatment) ILLUMINA 639.34 M
SRR18163563 miRNA-Seq of Camellia sinensis: 2 day old plant with leaf from China: Sinan County\, Guizhou Province, Mock1 (uninfected treatment) ILLUMINA 630.38 M
PRJNA742222 The study investigates leaf spot on tea caused by Pestalotiopsis trachicarpicola in Yuqing County, Guizhou Province, China, sequencing small RNA from infected tea leaves to better understand the pathogenesis of the fungus. -
6
Library Title Platform Total Base VCF File
SRR14996693 miRNA-Seq of Camellia sinensis: biological replicate 3 treatment and 5 years old and infected with PDA plugs with actively growing mycelia of Pestaiotiopsis trachicarpicola isolate GZYQ2018YQX001 for 1 day stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Treat1_3 for miRNA analysis of tea leaves ILLUMINA 579.4 M
SRR14996694 miRNA-Seq of Camellia sinensis: biological replicate 2 treatment and 5 years old and infected with PDA plugs with actively growing mycelia of Pestaiotiopsis trachicarpicola isolate GZYQ2018YQX001 for 1 day stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Treat1_2 for miRNA analysis of tea leaves ILLUMINA 732.92 M
SRR14996695 miRNA-Seq of Camellia sinensis: biological replicate 1 treatment and 5 years old and infected with PDA plugs with actively growing mycelia of Pestaiotiopsis trachicarpicola isolate GZYQ2018YQX001 for 1 day stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Treat1_1 for miRNA analysis of tea leaves ILLUMINA 622.28 M
SRR14996696 miRNA-Seq of Camellia sinensis: biological replicate 3 treatment and 5 years old and inoculated with PDA plugs for 1 day stage plant with leaf from China: Guizhou University, Fuding-dabaicha, CK1_3 for miRNA analysis of tea leaves ILLUMINA 588.82 M
SRR14996697 miRNA-Seq of Camellia sinensis: biological replicate 2 treatment and 5 years old and inoculated with PDA plugs for 1 day stage plant with leaf from China: Guizhou University, Fuding-dabaicha, CK1_2 for miRNA analysis of tea leaves ILLUMINA 582.61 M
SRR14996698 miRNA-Seq of Camellia sinensis: biological replicate 1 treatment and 5 years old and inoculated with PDA plugs for 1 day stage plant with leaf from China: Guizhou University, Fuding-dabaicha, CK1_1 for miRNA analysis of tea leaves ILLUMINA 525.25 M
PRJNA558429 Lasiodiplodia theobromae significantly impacts tea leaf production in Guizhou Province, China, as a major pathogen causing leaf spot on the widely cultivated tea plant, Camellia sinensis. -
6
Library Title Platform Total Base VCF File
SRR9903553 miRNA-Seq of Camellia sinensis: biological replicate 2 treatment and 5 years old and infected with PDA plugs with actively growing mycelia of Lasiodiplodia theobromae isolate GZHS-2017-010 for 3 days stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Lt2 for microRNA analysis ILLUMINA 796.09 M
SRR9903554 miRNA-Seq of Camellia sinensis: biological replicate 3 treatment and 5 years old and infected with PDA plugs with actively growing mycelia of Lasiodiplodia theobromae isolate GZHS-2017-010 for 3 days stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Lt3 for microRNA analysis ILLUMINA 718.61 M
SRR9903555 miRNA-Seq of Camellia sinensis: biological replicate 3 treatment and 5 years old and inoculated with PDA plugs for 3 days stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Mock3 for microRNA analysis ILLUMINA 938.02 M
SRR9903556 miRNA-Seq of Camellia sinensis: biological replicate 1 treatment and 5 years old and infected with PDA plugs with actively growing mycelia of Lasiodiplodia theobromae isolate GZHS-2017-010 for 3 days stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Lt1 for microRNA analysis ILLUMINA 899.56 M
SRR9903557 miRNA-Seq of Camellia sinensis: biological replicate 1 treatment and 5 years old and inoculated with PDA plugs for 3 days stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Mock1 for microRNA analysis ILLUMINA 847.08 M
SRR9903558 miRNA-Seq of Camellia sinensis: biological replicate 2 treatment and 5 years old and inoculated with PDA plugs for 3 days stage plant with leaf from China: Guizhou University, Fuding-dabaicha, Mock2 for microRNA analysis ILLUMINA 765.98 M
PRJNA655376 Integrated transcriptome and miRNA analysis provides new insights into miRNAs of oolong tea (Camellia sinensis) in solar-withering -
3
Library Title Platform Total Base VCF File
SRR12390961 miRNA-Seq of Camellia sinensis: one bud and three leaves stage plant with solar-withered leaves from China: Fujian\, Fuzhou, Tieguanyin, SW BGISEQ 655.00 M
SRR12390962 miRNA-Seq of Camellia sinensis: one bud and three leaves stage plant with indoor-withered leaves from China: Fujian\, Fuzhou, Tieguanyin, IW BGISEQ 659.70 M
SRR12390963 miRNA-Seq of Camellia sinensis: one bud and three leaves stage plant with fresh leaves from China: Fujian\, Fuzhou, Tieguanyin, FL BGISEQ 613.63 M
PRJNA574929 The study enhances understanding of miRNAs in Camellia sinensis, identifying new miRNAs and their gene targets. -
9
Library Title Platform Total Base VCF File
SRR10202377 miRNA-Seq of Camellia sinensis: root, GSM4100999 ILLUMINA 493.82 M
SRR10202378 miRNA-Seq of Camellia sinensis: root, GSM4101000 ILLUMINA 518.35 M
SRR10202379 miRNA-Seq of Camellia sinensis: root, GSM4101001 ILLUMINA 490.36 M
SRR10202380 miRNA-Seq of Camellia sinensis: flower, GSM4101002 ILLUMINA 495.83 M
SRR10202381 miRNA-Seq of Camellia sinensis: flower, GSM4101003 ILLUMINA 478.29 M
SRR10202382 miRNA-Seq of Camellia sinensis: flower, GSM4101004 ILLUMINA 474.5 M
SRR10202383 miRNA-Seq of Camellia sinensis: leaf, GSM4101005 ILLUMINA 510.63 M
SRR10202384 miRNA-Seq of Camellia sinensis: leaf, GSM4101006 ILLUMINA 488.35 M
SRR10202385 miRNA-Seq of Camellia sinensis: leaf, GSM4101007 ILLUMINA 521.16 M

Copyright @Guo Lab College of Life Sciences, Nanjing Forestry University, China 京ICP备2022028499号-4