| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJNA948693 |
To clarify the subgenome evolution in polyploid woody bamboos |
- |
 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR25422065 |
Bisulfite-Seq of Phyllostachys edulis: vegetative adult plant with leaf from China: Yunnan Province\, Kunming City\, Kunming Institute of Botany, GZH03 |
ILLUMINA |
71.74 G |
|
| SRR25422066 |
Bisulfite-Seq of Phyllostachys edulis: vegetative adult plant with leaf from China: Yunnan Province\, Kunming City\, Kunming Institute of Botany, GZH03 |
ILLUMINA |
67.52 G |
|
|
| PRJNA914504 |
Whole genome bisulfite sequencing, strand-specific transcriptome sequencing, miRNA sequencing, and Nanopore gDNA sequencing for the underground rhizome-root system in moso bamboo. |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR22979163 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with rhizome tip from China, RT-rep1, Sample 4 |
ILLUMINA |
59.67 G |
|
| SRR22979164 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with front lateral bud from China, LB-d-rep3, Sample 3 |
ILLUMINA |
62.05 G |
|
| SRR22979165 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with front lateral bud from China, LB-d-rep2, Sample 3 |
ILLUMINA |
62.94 G |
|
| SRR22979166 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with front lateral bud from China, LB-d-rep1, Sample 3 |
ILLUMINA |
61.02 G |
|
| SRR22979167 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with middle lateral bud from China, LB-m-rep3, Sample 2 |
ILLUMINA |
62.93 G |
|
| SRR22979168 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with middle lateral bud from China, LB-m-rep2, Sample 2 |
ILLUMINA |
64.98 G |
|
| SRR22979169 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with middle lateral bud from China, LB-m-rep1, Sample 2 |
ILLUMINA |
57.5 G |
|
| SRR22979170 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with basal lateral bud from China, LB-p-rep3, Sample 1 |
ILLUMINA |
64.78 G |
|
| SRR22979171 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with roots growing from new shoot from China, RGFNS-rep3, Sample 5 |
ILLUMINA |
57.46 G |
|
| SRR22979172 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with roots growing from new shoot from China, RGFNS-rep2, Sample 5 |
ILLUMINA |
57.39 G |
|
| SRR22979173 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with roots growing from new shoot from China, RGFNS-rep1, Sample 5 |
ILLUMINA |
63.88 G |
|
| SRR22979174 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with rhizome tip from China, RT-rep3, Sample 4 |
ILLUMINA |
62.65 G |
|
| SRR22979175 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with rhizome tip from China, RT-rep2, Sample 4 |
ILLUMINA |
64.63 G |
|
| SRR22979176 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with basal lateral bud from China, LB-p-rep2, Sample 1 |
ILLUMINA |
59.93 G |
|
| SRR22979177 |
Bisulfite-Seq of Phyllostachys edulis: wild type fast growth stage plant with basal lateral bud from China, LB-p-rep1, Sample 1 |
ILLUMINA |
58.4 G |
|
|
| PRJNA903955 |
The flowering mechanism of moso bamboo was revealed by DNA methylation and transcriptomic analysis |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR22366697 |
Bisulfite-Seq of Phyllostachys edulis: flowering leaf, moso bamboo, FL |
ILLUMINA |
60.45 G |
|
| SRR22366701 |
Bisulfite-Seq of Phyllostachys edulis: non-flowering leaf, moso bamboo, NFL |
ILLUMINA |
67.67 G |
|
| SRR22366702 |
Bisulfite-Seq of Phyllostachys edulis: non-flowering leaf, moso bamboo, NFL |
ILLUMINA |
60.8 G |
|
| SRR22366703 |
Bisulfite-Seq of Phyllostachys edulis: non-flowering leaf, moso bamboo, NFL |
ILLUMINA |
66.68 G |
|
| SRR22366705 |
Bisulfite-Seq of Phyllostachys edulis: spica, moso bamboo, flowering buds |
ILLUMINA |
59.59 G |
|
| SRR22366706 |
Bisulfite-Seq of Phyllostachys edulis: spica, moso bamboo, flowering buds |
ILLUMINA |
69.52 G |
|
| SRR22366707 |
Bisulfite-Seq of Phyllostachys edulis: spica, moso bamboo, flowering buds |
ILLUMINA |
61.64 G |
|
| SRR22366711 |
Bisulfite-Seq of Phyllostachys edulis: flowering leaf, moso bamboo, FL |
ILLUMINA |
56.73 G |
|
| SRR22366712 |
Bisulfite-Seq of Phyllostachys edulis: flowering leaf, moso bamboo, FL |
ILLUMINA |
58.02 G |
|
|
| PRJNA820321 |
PacBio Iso-Seq, Illumina RNA-seq, and whole-genome bisulfite sequencing of moso bamboo shoots (Phyllostachys edulis) during fast growth |
Li et al., 2023 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR18493896 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-4-M |
ILLUMINA |
15.27 G |
|
| SRR18493897 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-4-M |
ILLUMINA |
14.65 G |
|
| SRR18493898 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-4-B |
ILLUMINA |
13.92 G |
|
| SRR18493899 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-4-B |
ILLUMINA |
15.14 G |
|
| SRR18493901 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-2-M |
ILLUMINA |
18.63 G |
|
| SRR18493902 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-2-M |
ILLUMINA |
14.15 G |
|
| SRR18493903 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-2-B |
ILLUMINA |
19.25 G |
|
| SRR18493904 |
Bisulfite-Seq of Phyllostachys edulis: shoot from China:Fujian, S-2-B |
ILLUMINA |
18.34 G |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
2